RNA–Protein interactions for RNA: ENST00000373514.2

CDX4-201, Transcript of caudal type homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX4, Length 1,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4-201ENST00000373514 ZC3H11AO75152 810 aaKnown RBP eCLIP20.18■□□□□ 0.82
CDX4-201ENST00000373514 DDHD2O94830 711 aa20.18■□□□□ 0.82
CDX4-201ENST00000373514 CD44P16070 742 aaKnown RBP20.18■□□□□ 0.82
CDX4-201ENST00000373514 CYP2J2P51589 502 aa20.18■□□□□ 0.82
CDX4-201ENST00000373514 YARSP54577 528 aaKnown RBP20.18■□□□□ 0.82
CDX4-201ENST00000373514 ENOX2Q16206 610 aaKnown RBP20.18■□□□□ 0.82
CDX4-201ENST00000373514 STX1AQ16623 288 aa20.18■□□□□ 0.82
CDX4-201ENST00000373514 SLC10A6Q3KNW5 377 aa20.18■□□□□ 0.82
CDX4-201ENST00000373514 SPOUT1Q5T280 376 aaKnown RBP20.18■□□□□ 0.82
CDX4-201ENST00000373514 GUF1Q8N442 669 aaKnown RBP20.18■□□□□ 0.82
CDX4-201ENST00000373514 FAM213AQ9BRX8 229 aa20.18■□□□□ 0.82
CDX4-201ENST00000373514 UBN1Q9NPG3 1134 aa20.18■□□□□ 0.82
CDX4-201ENST00000373514 HSPBP1Q9NZL4 362 aa20.18■□□□□ 0.82
CDX4-201ENST00000373514 CPSF3Q9UKF6 684 aaKnown RBP20.18■□□□□ 0.82
CDX4-201ENST00000373514 SZT2Q5T011 3432 aa20.18■□□□□ 0.82
CDX4-201ENST00000373514 GARTP22102 1010 aa20.17■□□□□ 0.82
CDX4-201ENST00000373514 CTNNB1P35222 781 aa20.17■□□□□ 0.82
CDX4-201ENST00000373514 WNT7BP56706 349 aa20.17■□□□□ 0.82
CDX4-201ENST00000373514 RNASELQ05823 741 aaKnown RBP20.17■□□□□ 0.82
CDX4-201ENST00000373514 SPAG1Q07617 926 aa20.17■□□□□ 0.82
CDX4-201ENST00000373514 ANO6Q4KMQ2 910 aa20.17■□□□□ 0.82
CDX4-201ENST00000373514 ZNF697Q5TEC3 545 aa20.17■□□□□ 0.82
CDX4-201ENST00000373514 COLGALT1Q8NBJ5 622 aa20.17■□□□□ 0.82
CDX4-201ENST00000373514 ARNTL2Q8WYA1 636 aa20.17■□□□□ 0.82
CDX4-201ENST00000373514 CLP1Q92989 425 aaKnown RBP20.17■□□□□ 0.82
CDX4-201ENST00000373514 ZMAT2Q96NC0 199 aaKnown RBP20.17■□□□□ 0.82
CDX4-201ENST00000373514 TGS1Q96RS0 853 aaKnown RBP20.17■□□□□ 0.82
CDX4-201ENST00000373514 NRDE2Q9H7Z3 1164 aa20.17■□□□□ 0.82
CDX4-201ENST00000373514 GRPEL1Q9HAV7 217 aa20.17■□□□□ 0.82
CDX4-201ENST00000373514 MYO9BQ13459 2157 aa20.17■□□□□ 0.82
CDX4-201ENST00000373514 CLTAP09496 248 aa20.17■□□□□ 0.82
CDX4-201ENST00000373514 GRIK3Q13003 919 aa20.17■□□□□ 0.82
CDX4-201ENST00000373514 HS2ST1Q7LGA3 356 aa20.17■□□□□ 0.82
CDX4-201ENST00000373514 RNF214Q8ND24 703 aa20.17■□□□□ 0.82
CDX4-201ENST00000373514 SEMA6BQ9H3T3 888 aa20.17■□□□□ 0.82
CDX4-201ENST00000373514 TOPORSQ9NS56 1045 aaPredicted RBP20.17■□□□□ 0.82
CDX4-201ENST00000373514 ANO10Q9NW15 660 aa20.17■□□□□ 0.82
CDX4-201ENST00000373514 TRIM49BA6NDI0 452 aa20.16■□□□□ 0.82
CDX4-201ENST00000373514 NT5C1B-RDH14C9J2C7 533 aa20.16■□□□□ 0.82
CDX4-201ENST00000373514 RFXAPO00287 272 aa20.16■□□□□ 0.82
CDX4-201ENST00000373514 ERVK-21P61565 698 aa20.16■□□□□ 0.82
CDX4-201ENST00000373514 NAB2Q15742 525 aa20.16■□□□□ 0.82
CDX4-201ENST00000373514 EPC2Q52LR7 807 aa20.16■□□□□ 0.82
CDX4-201ENST00000373514 ALKAL1Q6UXT8 129 aa20.16■□□□□ 0.82
CDX4-201ENST00000373514 CBWD2Q8IUF1 395 aa20.16■□□□□ 0.82
CDX4-201ENST00000373514 ADSSL1Q8N142 457 aa20.16■□□□□ 0.82
CDX4-201ENST00000373514 GPD1LQ8N335 351 aa20.16■□□□□ 0.82
CDX4-201ENST00000373514 GDPD5Q8WTR4 605 aa20.16■□□□□ 0.82
CDX4-201ENST00000373514 RABGGTAQ92696 567 aa20.16■□□□□ 0.82
CDX4-201ENST00000373514 FAM212AQ96EL1 285 aa20.16■□□□□ 0.82
CDX4-201ENST00000373514 FAM84AQ96KN4 292 aa20.16■□□□□ 0.82
CDX4-201ENST00000373514 GOLGA2P5Q9HBQ8 144 aa20.16■□□□□ 0.82
CDX4-201ENST00000373514 CNTN3Q9P232 1028 aa20.16■□□□□ 0.82
CDX4-201ENST00000373514 SMIM28A0A1B0GU29 152 aa20.15■□□□□ 0.82
CDX4-201ENST00000373514 TTC26A0AVF1 554 aa20.15■□□□□ 0.82
CDX4-201ENST00000373514 LACTBL1A8MY62 500 aa20.15■□□□□ 0.82
CDX4-201ENST00000373514 F8W810 466 aa20.15■□□□□ 0.82
CDX4-201ENST00000373514 ADRB2P07550 413 aa20.15■□□□□ 0.82
CDX4-201ENST00000373514 MRE11P49959 708 aa20.15■□□□□ 0.82
CDX4-201ENST00000373514 PMS1P54277 932 aaKnown RBP20.15■□□□□ 0.82
CDX4-201ENST00000373514 NLRP12P59046 1061 aa20.15■□□□□ 0.82
CDX4-201ENST00000373514 SOX4Q06945 474 aaPredicted RBP20.15■□□□□ 0.82
CDX4-201ENST00000373514 DSC1Q08554 894 aa20.15■□□□□ 0.82
CDX4-201ENST00000373514 GRIN2CQ14957 1233 aa20.15■□□□□ 0.82
CDX4-201ENST00000373514 ZCWPW2Q504Y3 356 aa20.15■□□□□ 0.82
CDX4-201ENST00000373514 COBLL1Q53SF7 1204 aa20.15■□□□□ 0.82
CDX4-201ENST00000373514 XKR4Q5GH76 650 aa20.15■□□□□ 0.82
CDX4-201ENST00000373514 TMEM173Q86WV6 379 aaPredicted RBP20.15■□□□□ 0.82
CDX4-201ENST00000373514 PPP1R10Q96QC0 940 aaKnown RBP20.15■□□□□ 0.82
CDX4-201ENST00000373514 PAAF1Q9BRP4 392 aa20.15■□□□□ 0.82
CDX4-201ENST00000373514 DNAJC25Q9H1X3 360 aa20.15■□□□□ 0.82
CDX4-201ENST00000373514 RPF1Q9H9Y2 349 aaKnown RBP20.15■□□□□ 0.82
CDX4-201ENST00000373514 VWA8A3KMH1 1905 aa20.15■□□□□ 0.82
CDX4-201ENST00000373514 TMEM265A0A087WTH1 108 aa20.14■□□□□ 0.81
CDX4-201ENST00000373514 CASTOR2A6NHX0 329 aa20.14■□□□□ 0.81
CDX4-201ENST00000373514 TULP1O00294 542 aaPredicted RBP20.14■□□□□ 0.81
CDX4-201ENST00000373514 PDXKO00764 312 aa20.14■□□□□ 0.81
CDX4-201ENST00000373514 EXTL3O43909 919 aa20.14■□□□□ 0.81
CDX4-201ENST00000373514 NFICP08651 508 aa20.14■□□□□ 0.81
CDX4-201ENST00000373514 LAG3P18627 525 aa20.14■□□□□ 0.81
CDX4-201ENST00000373514 SLC11A1P49279 550 aa20.14■□□□□ 0.81
CDX4-201ENST00000373514 PPP2R3AQ06190 1150 aa20.14■□□□□ 0.81
CDX4-201ENST00000373514 C12orf56Q8IXR9 622 aa20.14■□□□□ 0.81
CDX4-201ENST00000373514 COLGALT2Q8IYK4 626 aa20.14■□□□□ 0.81
CDX4-201ENST00000373514 FBXO22Q8NEZ5 403 aa20.14■□□□□ 0.81
CDX4-201ENST00000373514 BCL7CQ8WUZ0 217 aaPredicted RBP20.14■□□□□ 0.81
CDX4-201ENST00000373514 C18orf25Q96B23 403 aaPredicted RBP20.14■□□□□ 0.81
CDX4-201ENST00000373514 FAM193BQ96PV7 902 aaPredicted RBP20.14■□□□□ 0.81
CDX4-201ENST00000373514 PRDM12Q9H4Q4 367 aa20.14■□□□□ 0.81
CDX4-201ENST00000373514 TUBGCP4Q9UGJ1 667 aa20.14■□□□□ 0.81
CDX4-201ENST00000373514 CTNND2Q9UQB3 1225 aa20.14■□□□□ 0.81
CDX4-201ENST00000373514 PPP1R3GB7ZBB8 358 aa20.13■□□□□ 0.81
CDX4-201ENST00000373514 CSPG5O95196 566 aa20.13■□□□□ 0.81
CDX4-201ENST00000373514 KIF20AO95235 890 aa20.13■□□□□ 0.81
CDX4-201ENST00000373514 NR3C1P04150 777 aa20.13■□□□□ 0.81
CDX4-201ENST00000373514 THP07101 528 aa20.13■□□□□ 0.81
CDX4-201ENST00000373514 BMPR1AP36894 532 aa20.13■□□□□ 0.81
CDX4-201ENST00000373514 BCAR1P56945 870 aa20.13■□□□□ 0.81
CDX4-201ENST00000373514 KLHL10Q6JEL2 608 aa20.13■□□□□ 0.81
CDX4-201ENST00000373514 KCNT2Q6UVM3 1135 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 148 ms