RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 DSTYKQ6XUX3 929 aa15.02□□□□□ -0.01
LMX1B-202ENST00000373474 MMGT1Q8N4V1 131 aa15.02□□□□□ -0.01
LMX1B-202ENST00000373474 COG4Q9H9E3 785 aa15.02□□□□□ -0.01
LMX1B-202ENST00000373474 SENP2Q9HC62 589 aa15.02□□□□□ -0.01
LMX1B-202ENST00000373474 HOXC10Q9NYD6 342 aa15.02□□□□□ -0.01
LMX1B-202ENST00000373474 SEPT3Q9UH03 358 aa15.02□□□□□ -0.01
LMX1B-202ENST00000373474 FBXO40Q9UH90 709 aa15.02□□□□□ -0.01
LMX1B-202ENST00000373474 ASAP2O43150 1006 aa15.02□□□□□ -0.01
LMX1B-202ENST00000373474 CHN1P15882 459 aa15.02□□□□□ -0.01
LMX1B-202ENST00000373474 RWDD4Q6NW29 188 aaKnown RBP15.02□□□□□ -0.01
LMX1B-202ENST00000373474 HAUS6Q7Z4H7 955 aa15.02□□□□□ -0.01
LMX1B-202ENST00000373474 ABI1Q8IZP0 508 aa15.02□□□□□ -0.01
LMX1B-202ENST00000373474 RYBPQ8N488 228 aaPredicted RBP15.02□□□□□ -0.01
LMX1B-202ENST00000373474 MRPL4Q9BYD3 311 aaKnown RBP15.02□□□□□ -0.01
LMX1B-202ENST00000373474 WDR70Q9NW82 654 aa15.02□□□□□ -0.01
LMX1B-202ENST00000373474 SLC9A2Q9UBY0 812 aa15.02□□□□□ -0.01
LMX1B-202ENST00000373474 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.02□□□□□ -0.01
LMX1B-202ENST00000373474 SMARCA1P28370 1054 aa15.02□□□□□ -0.01
LMX1B-202ENST00000373474 ARSEP51690 589 aa15.02□□□□□ -0.01
LMX1B-202ENST00000373474 ARHGEF1Q92888 912 aaKnown RBP15.02□□□□□ -0.01
LMX1B-202ENST00000373474 VPS39Q96JC1 886 aa15.02□□□□□ -0.01
LMX1B-202ENST00000373474 UCHL3P15374 230 aa15.01□□□□□ -0.01
LMX1B-202ENST00000373474 CCDC15Q0P6D6 951 aa15.01□□□□□ -0.01
LMX1B-202ENST00000373474 MORF4L2Q15014 288 aa15.01□□□□□ -0.01
LMX1B-202ENST00000373474 Q3C1V9 767 aa15.01□□□□□ -0.01
LMX1B-202ENST00000373474 MAP3K14Q99558 947 aa15.01□□□□□ -0.01
LMX1B-202ENST00000373474 TRIM51Q9BSJ1 452 aa15.01□□□□□ -0.01
LMX1B-202ENST00000373474 MTMR4Q9NYA4 1195 aa15.01□□□□□ -0.01
LMX1B-202ENST00000373474 SENP1Q9P0U3 644 aa15.01□□□□□ -0.01
LMX1B-202ENST00000373474 PCSK1NQ9UHG2 260 aa15.01□□□□□ -0.01
LMX1B-202ENST00000373474 HLA-DPA1P20036 260 aa15.01□□□□□ -0.01
LMX1B-202ENST00000373474 PMLP29590 882 aa15.01□□□□□ -0.01
LMX1B-202ENST00000373474 STK4Q13043 487 aa15.01□□□□□ -0.01
LMX1B-202ENST00000373474 REEP2Q9BRK0 252 aa15.01□□□□□ -0.01
LMX1B-202ENST00000373474 VPS11Q9H270 941 aa15.01□□□□□ -0.01
LMX1B-202ENST00000373474 RBAKQ9NYW8 714 aaPredicted RBP15.01□□□□□ -0.01
LMX1B-202ENST00000373474 ARL2BPQ9Y2Y0 163 aa15.01□□□□□ -0.01
LMX1B-202ENST00000373474 PITPNM2Q9BZ72 1349 aa15.01□□□□□ -0.01
LMX1B-202ENST00000373474 TBX3O15119 743 aa15.01□□□□□ -0.01
LMX1B-202ENST00000373474 MMP10P09238 476 aa15.01□□□□□ -0.01
LMX1B-202ENST00000373474 SDC4P31431 198 aa15.01□□□□□ -0.01
LMX1B-202ENST00000373474 PAPOLAP51003 745 aaKnown RBP15.01□□□□□ -0.01
LMX1B-202ENST00000373474 GALCP54803 685 aa15.01□□□□□ -0.01
LMX1B-202ENST00000373474 ZNF543Q08ER8 600 aa15.01□□□□□ -0.01
LMX1B-202ENST00000373474 REXO1L1PQ8IX06 675 aa15.01□□□□□ -0.01
LMX1B-202ENST00000373474 ZNF34Q8IZ26 560 aa15.01□□□□□ -0.01
LMX1B-202ENST00000373474 RCOR2Q8IZ40 523 aa15.01□□□□□ -0.01
LMX1B-202ENST00000373474 HNRNPLLQ8WVV9 542 aaKnown RBP15.01□□□□□ -0.01
LMX1B-202ENST00000373474 NEUROG2Q9H2A3 272 aa15.01□□□□□ -0.01
LMX1B-202ENST00000373474 UVRAGQ9P2Y5 699 aa15.01□□□□□ -0.01
LMX1B-202ENST00000373474 TCP11X1B4DZS4 312 aa15.01□□□□□ -0.01
LMX1B-202ENST00000373474 YWHABP31946 246 aaKnown RBP15.01□□□□□ -0.01
LMX1B-202ENST00000373474 FMO5P49326 533 aa15.01□□□□□ -0.01
LMX1B-202ENST00000373474 KLK7P49862 253 aa15.01□□□□□ -0.01
LMX1B-202ENST00000373474 STX19Q8N4C7 294 aa15.01□□□□□ -0.01
LMX1B-202ENST00000373474 SH2D3CQ8N5H7 860 aa15.01□□□□□ -0.01
LMX1B-202ENST00000373474 TTLL6Q8N841 843 aa15.01□□□□□ -0.01
LMX1B-202ENST00000373474 SYN2Q92777 582 aaPredicted RBP15.01□□□□□ -0.01
LMX1B-202ENST00000373474 BTBD6Q96KE9 485 aa15.01□□□□□ -0.01
LMX1B-202ENST00000373474 CCT8L2Q96SF2 557 aa15.01□□□□□ -0.01
LMX1B-202ENST00000373474 RNF146Q9NTX7 359 aa15.01□□□□□ -0.01
LMX1B-202ENST00000373474 HSPBP1Q9NZL4 362 aa15.01□□□□□ -0.01
LMX1B-202ENST00000373474 PKD2L2Q9NZM6 624 aa15.01□□□□□ -0.01
LMX1B-202ENST00000373474 A0A0G2JLW4 131 aa15□□□□□ -0.01
LMX1B-202ENST00000373474 SPDYE2BA6NHP3 402 aa15□□□□□ -0.01
LMX1B-202ENST00000373474 SPDYE6P0CI01 402 aa15□□□□□ -0.01
LMX1B-202ENST00000373474 DEFA1P59665 94 aa15□□□□□ -0.01
LMX1B-202ENST00000373474 DEFA3P59666 94 aa15□□□□□ -0.01
LMX1B-202ENST00000373474 MAPRE2Q15555 327 aa15□□□□□ -0.01
LMX1B-202ENST00000373474 PIK3R5Q8WYR1 880 aa15□□□□□ -0.01
LMX1B-202ENST00000373474 ASCC2Q9H1I8 757 aaPredicted RBP15□□□□□ -0.01
LMX1B-202ENST00000373474 KIF17Q9P2E2 1029 aa15□□□□□ -0.01
LMX1B-202ENST00000373474 LZTS1Q9Y250 596 aa15□□□□□ -0.01
LMX1B-202ENST00000373474 PIK3C2BO00750 1634 aa15□□□□□ -0.01
LMX1B-202ENST00000373474 FLT1P17948 1338 aa15□□□□□ -0.01
LMX1B-202ENST00000373474 SCP2P22307 547 aa15□□□□□ -0.01
LMX1B-202ENST00000373474 EDRF1Q3B7T1 1238 aa15□□□□□ -0.01
LMX1B-202ENST00000373474 CATSPER4Q7RTX7 472 aa15□□□□□ -0.01
LMX1B-202ENST00000373474 TTC39CQ8N584 583 aa15□□□□□ -0.01
LMX1B-202ENST00000373474 AGO2Q9UKV8 859 aaKnown RBP15□□□□□ -0.01
LMX1B-202ENST00000373474 ZBTB24O43167 697 aaPredicted RBP15□□□□□ -0.01
LMX1B-202ENST00000373474 EFTUD2Q15029 972 aaKnown RBP eCLIP15□□□□□ -0.01
LMX1B-202ENST00000373474 HEATR6Q6AI08 1181 aaKnown RBP15□□□□□ -0.01
LMX1B-202ENST00000373474 SP8Q8IXZ3 490 aa15□□□□□ -0.01
LMX1B-202ENST00000373474 SCG3Q8WXD2 468 aaKnown RBP15□□□□□ -0.01
LMX1B-202ENST00000373474 C16orf96A6NNT2 1141 aa15□□□□□ -0.01
LMX1B-202ENST00000373474 ITIH2P19823 946 aa15□□□□□ -0.01
LMX1B-202ENST00000373474 SLC44A4Q53GD3 710 aa15□□□□□ -0.01
LMX1B-202ENST00000373474 USP49Q70CQ1 688 aa15□□□□□ -0.01
LMX1B-202ENST00000373474 BEST2Q8NFU1 509 aa15□□□□□ -0.01
LMX1B-202ENST00000373474 UBN1Q9NPG3 1134 aa15□□□□□ -0.01
LMX1B-202ENST00000373474 KCND2Q9NZV8 630 aa15□□□□□ -0.01
LMX1B-202ENST00000373474 RAD51CO43502 376 aa15□□□□□ -0.01
LMX1B-202ENST00000373474 MAP4P27816 1152 aaKnown RBP15□□□□□ -0.01
LMX1B-202ENST00000373474 RBM43Q6ZSC3 357 aaKnown RBP15□□□□□ -0.01
LMX1B-202ENST00000373474 ADCK1Q86TW2 530 aa15□□□□□ -0.01
LMX1B-202ENST00000373474 KIAA0391O15091 583 aaKnown RBP14.99□□□□□ -0.01
LMX1B-202ENST00000373474 DALRD3Q5D0E6 543 aaKnown RBP14.99□□□□□ -0.01
LMX1B-202ENST00000373474 C16orf86Q6ZW13 317 aa14.99□□□□□ -0.01
LMX1B-202ENST00000373474 CNPY4Q8N129 248 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms