RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 SYCP3Q8IZU3 236 aa15.83■□□□□ 0.12
COL9A2-202ENST00000372748 ARMC2Q8NEN0 867 aa15.83■□□□□ 0.12
COL9A2-202ENST00000372748 NUP85Q9BW27 656 aa15.83■□□□□ 0.12
COL9A2-202ENST00000372748 CHST7Q9NS84 486 aa15.83■□□□□ 0.12
COL9A2-202ENST00000372748 QSER1Q2KHR3 1735 aa15.83■□□□□ 0.12
COL9A2-202ENST00000372748 GAP43P17677 238 aa15.82■□□□□ 0.12
COL9A2-202ENST00000372748 CYP1B1Q16678 543 aa15.82■□□□□ 0.12
COL9A2-202ENST00000372748 ZNF568Q3ZCX4 644 aa15.82■□□□□ 0.12
COL9A2-202ENST00000372748 SGO2Q562F6 1265 aa15.82■□□□□ 0.12
COL9A2-202ENST00000372748 C1orf186Q6ZWK4 172 aa15.82■□□□□ 0.12
COL9A2-202ENST00000372748 ZNF720Q7Z2F6 126 aa15.82■□□□□ 0.12
COL9A2-202ENST00000372748 ZNF564Q8TBZ8 553 aaPredicted RBP15.82■□□□□ 0.12
COL9A2-202ENST00000372748 ZNF483Q8TF39 744 aaPredicted RBP15.82■□□□□ 0.12
COL9A2-202ENST00000372748 CD101Q93033 1021 aa15.82■□□□□ 0.12
COL9A2-202ENST00000372748 ELMO3Q96BJ8 720 aa15.82■□□□□ 0.12
COL9A2-202ENST00000372748 RPS6KC1Q96S38 1066 aa15.82■□□□□ 0.12
COL9A2-202ENST00000372748 FAM118BQ9BPY3 351 aa15.82■□□□□ 0.12
COL9A2-202ENST00000372748 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.82■□□□□ 0.12
COL9A2-202ENST00000372748 IGLV3-22A0A075B6J6 115 aa15.82■□□□□ 0.12
COL9A2-202ENST00000372748 EIF3DO15371 548 aaKnown RBP eCLIP15.82■□□□□ 0.12
COL9A2-202ENST00000372748 TTC4O95801 387 aa15.82■□□□□ 0.12
COL9A2-202ENST00000372748 FOXN2P32314 431 aa15.82■□□□□ 0.12
COL9A2-202ENST00000372748 CIITAP33076 1130 aa15.82■□□□□ 0.12
COL9A2-202ENST00000372748 ZYXQ15942 572 aaKnown RBP15.82■□□□□ 0.12
COL9A2-202ENST00000372748 GMCL1P1Q8NEA9 526 aa15.82■□□□□ 0.12
COL9A2-202ENST00000372748 SPOCK2Q92563 424 aa15.82■□□□□ 0.12
COL9A2-202ENST00000372748 CNKSR1Q969H4 720 aa15.82■□□□□ 0.12
COL9A2-202ENST00000372748 GMCL1Q96IK5 515 aa15.82■□□□□ 0.12
COL9A2-202ENST00000372748 FIZ1Q96SL8 496 aa15.82■□□□□ 0.12
COL9A2-202ENST00000372748 MKNK1Q9BUB5 465 aa15.82■□□□□ 0.12
COL9A2-202ENST00000372748 PITPNM3Q9BZ71 974 aa15.82■□□□□ 0.12
COL9A2-202ENST00000372748 TRIM7Q9C029 511 aa15.82■□□□□ 0.12
COL9A2-202ENST00000372748 WNT8AQ9H1J5 351 aa15.82■□□□□ 0.12
COL9A2-202ENST00000372748 SLC26A4O43511 780 aa15.81■□□□□ 0.12
COL9A2-202ENST00000372748 UNC5CO95185 931 aa15.81■□□□□ 0.12
COL9A2-202ENST00000372748 GGPS1O95749 300 aa15.81■□□□□ 0.12
COL9A2-202ENST00000372748 TARSP26639 723 aaKnown RBP15.81■□□□□ 0.12
COL9A2-202ENST00000372748 ITGA8P53708 1063 aa15.81■□□□□ 0.12
COL9A2-202ENST00000372748 HADHBP55084 474 aaKnown RBP15.81■□□□□ 0.12
COL9A2-202ENST00000372748 OTOP1Q7RTM1 612 aa15.81■□□□□ 0.12
COL9A2-202ENST00000372748 NOP9Q86U38 636 aaKnown RBP15.81■□□□□ 0.12
COL9A2-202ENST00000372748 ACER1Q8TDN7 264 aa15.81■□□□□ 0.12
COL9A2-202ENST00000372748 ERP27Q96DN0 273 aa15.81■□□□□ 0.12
COL9A2-202ENST00000372748 MASTLQ96GX5 879 aa15.81■□□□□ 0.12
COL9A2-202ENST00000372748 PRMT6Q96LA8 375 aaPredicted RBP15.81■□□□□ 0.12
COL9A2-202ENST00000372748 CSRNP1Q96S65 589 aa15.81■□□□□ 0.12
COL9A2-202ENST00000372748 HSD17B14Q9BPX1 270 aa15.81■□□□□ 0.12
COL9A2-202ENST00000372748 POLR3CQ9BUI4 534 aaPredicted RBP15.81■□□□□ 0.12
COL9A2-202ENST00000372748 MYBL1P10243 752 aa15.81■□□□□ 0.12
COL9A2-202ENST00000372748 IRX1P78414 480 aaPredicted RBP15.81■□□□□ 0.12
COL9A2-202ENST00000372748 PPP3CAQ08209 521 aa15.81■□□□□ 0.12
COL9A2-202ENST00000372748 STRIP1Q5VSL9 837 aa15.81■□□□□ 0.12
COL9A2-202ENST00000372748 CDCA2Q69YH5 1023 aaPredicted RBP15.81■□□□□ 0.12
COL9A2-202ENST00000372748 SLC47A2Q86VL8 602 aa15.81■□□□□ 0.12
COL9A2-202ENST00000372748 C9orf72Q96LT7 481 aa15.81■□□□□ 0.12
COL9A2-202ENST00000372748 MYLK2Q9H1R3 596 aa15.81■□□□□ 0.12
COL9A2-202ENST00000372748 NKIRAS1Q9NYS0 192 aa15.81■□□□□ 0.12
COL9A2-202ENST00000372748 PKD2L1Q9P0L9 805 aa15.81■□□□□ 0.12
COL9A2-202ENST00000372748 WRAP73Q9P2S5 460 aaPredicted RBP15.81■□□□□ 0.12
COL9A2-202ENST00000372748 CYP26A1O43174 497 aa15.81■□□□□ 0.12
COL9A2-202ENST00000372748 ATP5DP30049 168 aa15.81■□□□□ 0.12
COL9A2-202ENST00000372748 RWDD2BP57060 319 aa15.81■□□□□ 0.12
COL9A2-202ENST00000372748 AOC3Q16853 763 aa15.81■□□□□ 0.12
COL9A2-202ENST00000372748 PHLDB2Q86SQ0 1253 aa15.81■□□□□ 0.12
COL9A2-202ENST00000372748 VSIG1Q86XK7 387 aa15.81■□□□□ 0.12
COL9A2-202ENST00000372748 NLGN1Q8N2Q7 840 aa15.81■□□□□ 0.12
COL9A2-202ENST00000372748 ZSWIM2Q8NEG5 633 aa15.81■□□□□ 0.12
COL9A2-202ENST00000372748 ZNF653Q96CK0 615 aa15.81■□□□□ 0.12
COL9A2-202ENST00000372748 SAAL1Q96ER3 474 aa15.81■□□□□ 0.12
COL9A2-202ENST00000372748 NAF1Q96HR8 494 aaKnown RBP15.81■□□□□ 0.12
COL9A2-202ENST00000372748 DMAC2Q9NW81 257 aa15.81■□□□□ 0.12
COL9A2-202ENST00000372748 HAO1Q9UJM8 370 aa15.81■□□□□ 0.12
COL9A2-202ENST00000372748 NAALADL1Q9UQQ1 740 aa15.81■□□□□ 0.12
COL9A2-202ENST00000372748 SCN9AQ15858 1988 aa15.8■□□□□ 0.12
COL9A2-202ENST00000372748 DDX39AO00148 427 aaKnown RBP15.8■□□□□ 0.12
COL9A2-202ENST00000372748 HIP1RO75146 1068 aa15.8■□□□□ 0.12
COL9A2-202ENST00000372748 CCNB1P14635 433 aa15.8■□□□□ 0.12
COL9A2-202ENST00000372748 BLMHQ13867 455 aa15.8■□□□□ 0.12
COL9A2-202ENST00000372748 TRMT1LQ7Z2T5 733 aaKnown RBP15.8■□□□□ 0.12
COL9A2-202ENST00000372748 TCP10L2B9ZVM9 353 aa15.8■□□□□ 0.12
COL9A2-202ENST00000372748 H0Y3Z8 333 aa15.8■□□□□ 0.12
COL9A2-202ENST00000372748 SPAG7O75391 227 aa15.8■□□□□ 0.12
COL9A2-202ENST00000372748 TAC1P20366 129 aa15.8■□□□□ 0.12
COL9A2-202ENST00000372748 DNAJC3Q13217 504 aa15.8■□□□□ 0.12
COL9A2-202ENST00000372748 MTFR1Q15390 333 aa15.8■□□□□ 0.12
COL9A2-202ENST00000372748 TBC1D10BQ4KMP7 808 aaPredicted RBP15.8■□□□□ 0.12
COL9A2-202ENST00000372748 INTS8Q75QN2 995 aaKnown RBP15.8■□□□□ 0.12
COL9A2-202ENST00000372748 FBF1Q8TES7 1133 aa15.8■□□□□ 0.12
COL9A2-202ENST00000372748 HERPUD2Q9BSE4 406 aa15.8■□□□□ 0.12
COL9A2-202ENST00000372748 OSBPL1AQ9BXW6 950 aa15.8■□□□□ 0.12
COL9A2-202ENST00000372748 ADAM33Q9BZ11 813 aa15.8■□□□□ 0.12
COL9A2-202ENST00000372748 LRRC19Q9H756 370 aa15.8■□□□□ 0.12
COL9A2-202ENST00000372748 NINJ2Q9NZG7 142 aa15.8■□□□□ 0.12
COL9A2-202ENST00000372748 ADCY8P40145 1251 aa15.79■□□□□ 0.12
COL9A2-202ENST00000372748 STAT2P52630 851 aa15.79■□□□□ 0.12
COL9A2-202ENST00000372748 DAB2IPQ5VWQ8 1189 aa15.79■□□□□ 0.12
COL9A2-202ENST00000372748 ZNF449Q6P9G9 518 aa15.79■□□□□ 0.12
COL9A2-202ENST00000372748 RHBDF2Q6PJF5 856 aa15.79■□□□□ 0.12
COL9A2-202ENST00000372748 ARHGEF18Q6ZSZ5 1173 aa15.79■□□□□ 0.12
COL9A2-202ENST00000372748 EPS8L1Q8TE68 723 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms