RNA–Protein interactions for RNA: ENST00000372242.7

TMEM53-203, Transcript of transmembrane protein 53, humanhuman

TSL 3 BASIC

Gene TMEM53, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-203ENST00000372242 TTC26A0AVF1 554 aa17.76■□□□□ 0.43
TMEM53-203ENST00000372242 LACTBL1A8MY62 500 aa17.76■□□□□ 0.43
TMEM53-203ENST00000372242 KIAA0391O15091 583 aaKnown RBP17.76■□□□□ 0.43
TMEM53-203ENST00000372242 ARHGEF15O94989 841 aa17.76■□□□□ 0.43
TMEM53-203ENST00000372242 CA3P07451 260 aa17.76■□□□□ 0.43
TMEM53-203ENST00000372242 TYRO3Q06418 890 aa17.76■□□□□ 0.43
TMEM53-203ENST00000372242 ADAM9Q13443 819 aa17.76■□□□□ 0.43
TMEM53-203ENST00000372242 SNRNP35Q16560 246 aaKnown RBP17.76■□□□□ 0.43
TMEM53-203ENST00000372242 EDRF1Q3B7T1 1238 aa17.76■□□□□ 0.43
TMEM53-203ENST00000372242 ZSCAN23Q3MJ62 389 aa17.76■□□□□ 0.43
TMEM53-203ENST00000372242 CEP135Q66GS9 1140 aa17.76■□□□□ 0.43
TMEM53-203ENST00000372242 TTI2Q6NXR4 508 aa17.76■□□□□ 0.43
TMEM53-203ENST00000372242 SLC9A9Q8IVB4 645 aa17.76■□□□□ 0.43
TMEM53-203ENST00000372242 FBXL18Q96ME1 805 aa17.76■□□□□ 0.43
TMEM53-203ENST00000372242 ZMAT2Q96NC0 199 aaKnown RBP17.76■□□□□ 0.43
TMEM53-203ENST00000372242 RBAKQ9NYW8 714 aaPredicted RBP17.76■□□□□ 0.43
TMEM53-203ENST00000372242 PCDHA11Q9Y5I1 949 aa17.76■□□□□ 0.43
TMEM53-203ENST00000372242 SMIM28A0A1B0GU29 152 aa17.75■□□□□ 0.43
TMEM53-203ENST00000372242 ZNF233A6NK53 670 aa17.75■□□□□ 0.43
TMEM53-203ENST00000372242 B4GALT3O60512 393 aa17.75■□□□□ 0.43
TMEM53-203ENST00000372242 LETM1O95202 739 aaPredicted RBP17.75■□□□□ 0.43
TMEM53-203ENST00000372242 ADRB2P07550 413 aa17.75■□□□□ 0.43
TMEM53-203ENST00000372242 RNASELQ05823 741 aaKnown RBP17.75■□□□□ 0.43
TMEM53-203ENST00000372242 LRRC63Q05C16 580 aa17.75■□□□□ 0.43
TMEM53-203ENST00000372242 STX1AQ16623 288 aa17.75■□□□□ 0.43
TMEM53-203ENST00000372242 LRIT3Q3SXY7 679 aa17.75■□□□□ 0.43
TMEM53-203ENST00000372242 C11orf57Q6ZUT1 292 aaPredicted RBP17.75■□□□□ 0.43
TMEM53-203ENST00000372242 ZNF280BQ86YH2 543 aa17.75■□□□□ 0.43
TMEM53-203ENST00000372242 CMTR2Q8IYT2 770 aaKnown RBP17.75■□□□□ 0.43
TMEM53-203ENST00000372242 URGCPQ8TCY9 931 aa17.75■□□□□ 0.43
TMEM53-203ENST00000372242 DUSP9Q99956 384 aaKnown RBP17.75■□□□□ 0.43
TMEM53-203ENST00000372242 GZF1Q9H116 711 aaPredicted RBP17.75■□□□□ 0.43
TMEM53-203ENST00000372242 MRPL42Q9Y6G3 142 aaKnown RBP17.75■□□□□ 0.43
TMEM53-203ENST00000372242 INPPL1O15357 1258 aa17.75■□□□□ 0.43
TMEM53-203ENST00000372242 RPL13P26373 211 aaKnown RBP17.75■□□□□ 0.43
TMEM53-203ENST00000372242 PPP2R3AQ06190 1150 aa17.75■□□□□ 0.43
TMEM53-203ENST00000372242 NFIL3Q16649 462 aa17.75■□□□□ 0.43
TMEM53-203ENST00000372242 XKR4Q5GH76 650 aa17.75■□□□□ 0.43
TMEM53-203ENST00000372242 SPRED2Q7Z698 418 aa17.75■□□□□ 0.43
TMEM53-203ENST00000372242 TMEM130Q8N3G9 435 aa17.75■□□□□ 0.43
TMEM53-203ENST00000372242 FIBCD1Q8N539 461 aa17.75■□□□□ 0.43
TMEM53-203ENST00000372242 SP7Q8TDD2 431 aaPredicted RBP17.75■□□□□ 0.43
TMEM53-203ENST00000372242 TMEM174Q8WUU8 243 aa17.75■□□□□ 0.43
TMEM53-203ENST00000372242 NKX2-4Q9H2Z4 354 aa17.75■□□□□ 0.43
TMEM53-203ENST00000372242 PLEKHA5Q9HAU0 1116 aa17.75■□□□□ 0.43
TMEM53-203ENST00000372242 KIAA1586Q9HCI6 787 aa17.75■□□□□ 0.43
TMEM53-203ENST00000372242 ANO10Q9NW15 660 aa17.75■□□□□ 0.43
TMEM53-203ENST00000372242 CNTN3Q9P232 1028 aa17.75■□□□□ 0.43
TMEM53-203ENST00000372242 MSRAQ9UJ68 235 aa17.75■□□□□ 0.43
TMEM53-203ENST00000372242 BICDL2A1A5D9 508 aa17.74■□□□□ 0.43
TMEM53-203ENST00000372242 AKAP3O75969 853 aa17.74■□□□□ 0.43
TMEM53-203ENST00000372242 DDHD2O94830 711 aa17.74■□□□□ 0.43
TMEM53-203ENST00000372242 DNAJB2P25686 324 aa17.74■□□□□ 0.43
TMEM53-203ENST00000372242 SMAD3P84022 425 aaKnown RBP17.74■□□□□ 0.43
TMEM53-203ENST00000372242 FKBP3Q00688 224 aaKnown RBP17.74■□□□□ 0.43
TMEM53-203ENST00000372242 MYBPC2Q14324 1141 aa17.74■□□□□ 0.43
TMEM53-203ENST00000372242 BRSK2Q8IWQ3 736 aa17.74■□□□□ 0.43
TMEM53-203ENST00000372242 LRRC43Q8N309 656 aa17.74■□□□□ 0.43
TMEM53-203ENST00000372242 FAM84AQ96KN4 292 aa17.74■□□□□ 0.43
TMEM53-203ENST00000372242 MRPL9Q9BYD2 267 aaKnown RBP17.74■□□□□ 0.43
TMEM53-203ENST00000372242 DNAJC25Q9H1X3 360 aa17.74■□□□□ 0.43
TMEM53-203ENST00000372242 PDE11AQ9HCR9 933 aa17.74■□□□□ 0.43
TMEM53-203ENST00000372242 KANSL3Q9P2N6 904 aa17.74■□□□□ 0.43
TMEM53-203ENST00000372242 CACNG4Q9UBN1 327 aa17.74■□□□□ 0.43
TMEM53-203ENST00000372242 DNAJB4Q9UDY4 337 aa17.74■□□□□ 0.43
TMEM53-203ENST00000372242 DACH1Q9UI36 760 aa17.74■□□□□ 0.43
TMEM53-203ENST00000372242 RWDD2AQ9UIY3 292 aa17.74■□□□□ 0.43
TMEM53-203ENST00000372242 FRMD4BQ9Y2L6 1034 aa17.74■□□□□ 0.43
TMEM53-203ENST00000372242 TDRD15B5MCY1 1934 aaKnown RBP17.74■□□□□ 0.43
TMEM53-203ENST00000372242 ANK1P16157 1881 aa17.73■□□□□ 0.43
TMEM53-203ENST00000372242 LINC01553A4QN01 128 aa17.73■□□□□ 0.43
TMEM53-203ENST00000372242 SOX1O00570 391 aaPredicted RBP17.73■□□□□ 0.43
TMEM53-203ENST00000372242 THP07101 528 aa17.73■□□□□ 0.43
TMEM53-203ENST00000372242 PBX3P40426 434 aa17.73■□□□□ 0.43
TMEM53-203ENST00000372242 RAB30Q15771 203 aa17.73■□□□□ 0.43
TMEM53-203ENST00000372242 JADE1Q6IE81 842 aa17.73■□□□□ 0.43
TMEM53-203ENST00000372242 C18orf25Q96B23 403 aaPredicted RBP17.73■□□□□ 0.43
TMEM53-203ENST00000372242 CCDC127Q96BQ5 260 aa17.73■□□□□ 0.43
TMEM53-203ENST00000372242 KIF12Q96FN5 646 aa17.73■□□□□ 0.43
TMEM53-203ENST00000372242 PPP1R10Q96QC0 940 aaKnown RBP17.73■□□□□ 0.43
TMEM53-203ENST00000372242 CWH43Q9H720 699 aa17.73■□□□□ 0.43
TMEM53-203ENST00000372242 RALGAPA2Q2PPJ7 1873 aa17.72■□□□□ 0.43
TMEM53-203ENST00000372242 CETN3O15182 167 aa17.72■□□□□ 0.43
TMEM53-203ENST00000372242 ZC3H11AO75152 810 aaKnown RBP eCLIP17.72■□□□□ 0.43
TMEM53-203ENST00000372242 NFICP08651 508 aa17.72■□□□□ 0.43
TMEM53-203ENST00000372242 KCNE1P15382 129 aa17.72■□□□□ 0.43
TMEM53-203ENST00000372242 CYP24A1Q07973 514 aa17.72■□□□□ 0.43
TMEM53-203ENST00000372242 GRIK3Q13003 919 aa17.72■□□□□ 0.43
TMEM53-203ENST00000372242 NAB2Q15742 525 aa17.72■□□□□ 0.43
TMEM53-203ENST00000372242 SPOUT1Q5T280 376 aaKnown RBP17.72■□□□□ 0.43
TMEM53-203ENST00000372242 CSGALNACT2Q8N6G5 542 aa17.72■□□□□ 0.43
TMEM53-203ENST00000372242 RABGGTAQ92696 567 aa17.72■□□□□ 0.43
TMEM53-203ENST00000372242 FUCA2Q9BTY2 467 aa17.72■□□□□ 0.43
TMEM53-203ENST00000372242 NRDE2Q9H7Z3 1164 aa17.72■□□□□ 0.43
TMEM53-203ENST00000372242 GOLGA2P5Q9HBQ8 144 aa17.72■□□□□ 0.43
TMEM53-203ENST00000372242 MTUS1Q9ULD2 1270 aa17.72■□□□□ 0.43
TMEM53-203ENST00000372242 CHD7Q9P2D1 2997 aa17.72■□□□□ 0.43
TMEM53-203ENST00000372242 IL18RAPO95256 599 aa17.72■□□□□ 0.43
TMEM53-203ENST00000372242 LINC00271P0C7V0 271 aa17.72■□□□□ 0.43
TMEM53-203ENST00000372242 CCDC192P0DO97 292 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms