RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 PPANQ9NQ55 473 aaKnown RBP12.61□□□□□ -0.39
PDE6C-201ENST00000371447 COL2A1P02458 1487 aaPredicted RBP12.61□□□□□ -0.39
PDE6C-201ENST00000371447 INO80B-WBP1J3KQ70 363 aa12.6□□□□□ -0.39
PDE6C-201ENST00000371447 EDN1P05305 212 aa12.6□□□□□ -0.39
PDE6C-201ENST00000371447 GLRA2P23416 452 aa12.6□□□□□ -0.39
PDE6C-201ENST00000371447 AARSP49588 968 aaKnown RBP eCLIP12.6□□□□□ -0.39
PDE6C-201ENST00000371447 STAT5BP51692 787 aa12.6□□□□□ -0.39
PDE6C-201ENST00000371447 SEC24CP53992 1094 aa12.6□□□□□ -0.39
PDE6C-201ENST00000371447 PPATQ06203 517 aa12.6□□□□□ -0.39
PDE6C-201ENST00000371447 HSDL1Q3SXM5 330 aa12.6□□□□□ -0.39
PDE6C-201ENST00000371447 GLE1Q53GS7 698 aaKnown RBP12.6□□□□□ -0.39
PDE6C-201ENST00000371447 RHPN2Q8IUC4 686 aa12.6□□□□□ -0.39
PDE6C-201ENST00000371447 PRPF31Q8WWY3 499 aaKnown RBP12.6□□□□□ -0.39
PDE6C-201ENST00000371447 INO80BQ9C086 356 aaPredicted RBP12.6□□□□□ -0.39
PDE6C-201ENST00000371447 NXF1Q9UBU9 619 aaKnown RBP12.6□□□□□ -0.39
PDE6C-201ENST00000371447 DAAM1Q9Y4D1 1078 aa12.6□□□□□ -0.39
PDE6C-201ENST00000371447 MAPK4P31152 587 aa12.6□□□□□ -0.39
PDE6C-201ENST00000371447 PPFIA1Q13136 1202 aa12.6□□□□□ -0.39
PDE6C-201ENST00000371447 ALCAMQ13740 583 aa12.6□□□□□ -0.39
PDE6C-201ENST00000371447 KRT71Q3SY84 523 aa12.6□□□□□ -0.39
PDE6C-201ENST00000371447 BRDTQ58F21 947 aaPredicted RBP12.6□□□□□ -0.39
PDE6C-201ENST00000371447 SEL1L2Q5TEA6 688 aa12.6□□□□□ -0.39
PDE6C-201ENST00000371447 FAM71AQ8IYT1 594 aa12.6□□□□□ -0.39
PDE6C-201ENST00000371447 RNF149Q8NC42 400 aa12.6□□□□□ -0.39
PDE6C-201ENST00000371447 CCDC114Q96M63 670 aa12.6□□□□□ -0.39
PDE6C-201ENST00000371447 STXBP5LQ9Y2K9 1186 aa12.6□□□□□ -0.39
PDE6C-201ENST00000371447 AFG3L2Q9Y4W6 797 aa12.6□□□□□ -0.39
PDE6C-201ENST00000371447 C19orf81C9J6K1 198 aa12.6□□□□□ -0.39
PDE6C-201ENST00000371447 PI4K2BG5E9Z4 385 aa12.6□□□□□ -0.39
PDE6C-201ENST00000371447 RTN2O75298 545 aa12.6□□□□□ -0.39
PDE6C-201ENST00000371447 OATP04181 439 aa12.6□□□□□ -0.39
PDE6C-201ENST00000371447 WEE2P0C1S8 567 aa12.6□□□□□ -0.39
PDE6C-201ENST00000371447 ITIH3Q06033 890 aa12.6□□□□□ -0.39
PDE6C-201ENST00000371447 ADCY1Q08828 1119 aa12.6□□□□□ -0.39
PDE6C-201ENST00000371447 MTM1Q13496 603 aa12.6□□□□□ -0.39
PDE6C-201ENST00000371447 TDRD10Q5VZ19 366 aaKnown RBP12.6□□□□□ -0.39
PDE6C-201ENST00000371447 CEP120Q8N960 986 aa12.6□□□□□ -0.39
PDE6C-201ENST00000371447 HAPLN2Q9GZV7 340 aa12.6□□□□□ -0.39
PDE6C-201ENST00000371447 AZI2Q9H6S1 392 aa12.6□□□□□ -0.39
PDE6C-201ENST00000371447 NOCTQ9UK39 431 aaKnown RBP12.6□□□□□ -0.39
PDE6C-201ENST00000371447 DCDC2CA8MYV0 355 aa12.59□□□□□ -0.39
PDE6C-201ENST00000371447 THAP12O43422 761 aa12.59□□□□□ -0.39
PDE6C-201ENST00000371447 LYPLA2O95372 231 aa12.59□□□□□ -0.39
PDE6C-201ENST00000371447 SCP2P22307 547 aa12.59□□□□□ -0.39
PDE6C-201ENST00000371447 PPP1R7Q15435 360 aa12.59□□□□□ -0.39
PDE6C-201ENST00000371447 Q3C1V9 767 aa12.59□□□□□ -0.39
PDE6C-201ENST00000371447 KCTD17Q8N5Z5 321 aa12.59□□□□□ -0.39
PDE6C-201ENST00000371447 HAUS1Q96CS2 278 aa12.59□□□□□ -0.39
PDE6C-201ENST00000371447 VPS33BQ9H267 617 aa12.59□□□□□ -0.39
PDE6C-201ENST00000371447 SNCAIPQ9Y6H5 919 aa12.59□□□□□ -0.39
PDE6C-201ENST00000371447 SPATA31C2B4DYI2 1134 aa12.59□□□□□ -0.39
PDE6C-201ENST00000371447 CHRM1P11229 460 aaPredicted RBP12.59□□□□□ -0.39
PDE6C-201ENST00000371447 IBSPP21815 317 aaPredicted RBP12.59□□□□□ -0.39
PDE6C-201ENST00000371447 IRAK1P51617 712 aa12.59□□□□□ -0.39
PDE6C-201ENST00000371447 ALDH5A1P51649 535 aaPredicted RBP12.59□□□□□ -0.39
PDE6C-201ENST00000371447 HP1BP3Q5SSJ5 553 aaPredicted RBP12.59□□□□□ -0.39
PDE6C-201ENST00000371447 ZNF572Q7Z3I7 529 aaPredicted RBP12.59□□□□□ -0.39
PDE6C-201ENST00000371447 SLFN11Q7Z7L1 901 aa12.59□□□□□ -0.39
PDE6C-201ENST00000371447 ZDHHC14Q8IZN3 488 aa12.59□□□□□ -0.39
PDE6C-201ENST00000371447 FBXO25Q8TCJ0 367 aa12.59□□□□□ -0.39
PDE6C-201ENST00000371447 TXNRD2Q9NNW7 524 aa12.59□□□□□ -0.39
PDE6C-201ENST00000371447 PDGFCQ9NRA1 345 aa12.59□□□□□ -0.39
PDE6C-201ENST00000371447 NOVA2Q9UNW9 492 aaKnown RBP12.59□□□□□ -0.39
PDE6C-201ENST00000371447 PIK3R2O00459 728 aa12.59□□□□□ -0.39
PDE6C-201ENST00000371447 STBD1O95210 358 aa12.59□□□□□ -0.39
PDE6C-201ENST00000371447 ARIH2O95376 493 aa12.59□□□□□ -0.39
PDE6C-201ENST00000371447 CYP2C8P10632 490 aa12.59□□□□□ -0.39
PDE6C-201ENST00000371447 FGFR4P22455 802 aa12.59□□□□□ -0.39
PDE6C-201ENST00000371447 PSMC4P43686 418 aa12.59□□□□□ -0.39
PDE6C-201ENST00000371447 NSFP46459 744 aaKnown RBP12.59□□□□□ -0.39
PDE6C-201ENST00000371447 MMS22LQ6ZRQ5 1243 aa12.59□□□□□ -0.39
PDE6C-201ENST00000371447 RHOT2Q8IXI1 618 aa12.59□□□□□ -0.39
PDE6C-201ENST00000371447 PIK3R5Q8WYR1 880 aa12.59□□□□□ -0.39
PDE6C-201ENST00000371447 SHC3Q92529 594 aa12.59□□□□□ -0.39
PDE6C-201ENST00000371447 PWWP2AQ96N64 755 aa12.59□□□□□ -0.39
PDE6C-201ENST00000371447 SCLT1Q96NL6 688 aa12.59□□□□□ -0.39
PDE6C-201ENST00000371447 SYT11Q9BT88 431 aa12.59□□□□□ -0.39
PDE6C-201ENST00000371447 ISCUQ9H1K1 167 aa12.59□□□□□ -0.39
PDE6C-201ENST00000371447 SOWAHBA6NEL2 793 aa12.58□□□□□ -0.4
PDE6C-201ENST00000371447 CST3P01034 146 aaPredicted RBP12.58□□□□□ -0.4
PDE6C-201ENST00000371447 CLCN3P51790 818 aa12.58□□□□□ -0.4
PDE6C-201ENST00000371447 NFIL3Q16649 462 aa12.58□□□□□ -0.4
PDE6C-201ENST00000371447 CCDC137Q6PK04 289 aaKnown RBP12.58□□□□□ -0.4
PDE6C-201ENST00000371447 USP37Q86T82 979 aa12.58□□□□□ -0.4
PDE6C-201ENST00000371447 RNF25Q96BH1 459 aaPredicted RBP12.58□□□□□ -0.4
PDE6C-201ENST00000371447 CDHR1Q96JP9 859 aa12.58□□□□□ -0.4
PDE6C-201ENST00000371447 MTMR12Q9C0I1 747 aa12.58□□□□□ -0.4
PDE6C-201ENST00000371447 SPATC1LQ9H0A9 340 aa12.58□□□□□ -0.4
PDE6C-201ENST00000371447 ATP2C2O75185 946 aa12.58□□□□□ -0.4
PDE6C-201ENST00000371447 MYZAPP0CAP1 466 aa12.58□□□□□ -0.4
PDE6C-201ENST00000371447 CD19P15391 556 aa12.58□□□□□ -0.4
PDE6C-201ENST00000371447 CDR2Q01850 454 aa12.58□□□□□ -0.4
PDE6C-201ENST00000371447 UAP1Q16222 522 aaPredicted RBP12.58□□□□□ -0.4
PDE6C-201ENST00000371447 ATP13A4Q4VNC1 1196 aa12.58□□□□□ -0.4
PDE6C-201ENST00000371447 CCDC38Q502W7 563 aa12.58□□□□□ -0.4
PDE6C-201ENST00000371447 CAPN12Q6ZSI9 719 aa12.58□□□□□ -0.4
PDE6C-201ENST00000371447 JAMLQ86YT9 394 aa12.58□□□□□ -0.4
PDE6C-201ENST00000371447 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.58□□□□□ -0.4
PDE6C-201ENST00000371447 MRRFQ96E11 262 aaKnown RBP12.58□□□□□ -0.4
PDE6C-201ENST00000371447 FMO2Q99518 471 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms