RNA–Protein interactions for RNA: ENST00000370656.5

RPF1-202, Transcript of ribosome production factor 1 homolog, humanhuman

TSL 2 BASIC

Gene RPF1, Length 724 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-202ENST00000370656 CPB2Q96IY4 423 aa16.68■□□□□ 0.26
RPF1-202ENST00000370656 B3GALT6Q96L58 329 aa16.68■□□□□ 0.26
RPF1-202ENST00000370656 BCO2Q9BYV7 579 aa16.68■□□□□ 0.26
RPF1-202ENST00000370656 GPR62Q9BZJ7 368 aa16.68■□□□□ 0.26
RPF1-202ENST00000370656 ZSWIM4Q9H7M6 989 aa16.68■□□□□ 0.26
RPF1-202ENST00000370656 KCNMB3Q9NPA1 279 aa16.68■□□□□ 0.26
RPF1-202ENST00000370656 CFAP45Q9UL16 551 aa16.68■□□□□ 0.26
RPF1-202ENST00000370656 HES2Q9Y543 173 aa16.68■□□□□ 0.26
RPF1-202ENST00000370656 NCOR2Q9Y618 2525 aa16.68■□□□□ 0.26
RPF1-202ENST00000370656 SF3B1O75533 1304 aaKnown RBP eCLIP16.68■□□□□ 0.26
RPF1-202ENST00000370656 ZMYM2Q9UBW7 1377 aa16.67■□□□□ 0.26
RPF1-202ENST00000370656 TBX3O15119 743 aa16.67■□□□□ 0.26
RPF1-202ENST00000370656 PRPF40AO75400 957 aaKnown RBP16.67■□□□□ 0.26
RPF1-202ENST00000370656 HNRNPA1P09651 372 aaKnown RBP eCLIP16.67■□□□□ 0.26
RPF1-202ENST00000370656 POU5F1BQ06416 359 aa16.67■□□□□ 0.26
RPF1-202ENST00000370656 GRIK3Q13003 919 aa16.67■□□□□ 0.26
RPF1-202ENST00000370656 KLHL40Q2TBA0 621 aa16.67■□□□□ 0.26
RPF1-202ENST00000370656 ZNF396Q96N95 335 aaPredicted RBP16.67■□□□□ 0.26
RPF1-202ENST00000370656 FOXQ1Q9C009 403 aa16.67■□□□□ 0.26
RPF1-202ENST00000370656 MIOSQ9NXC5 875 aa16.67■□□□□ 0.26
RPF1-202ENST00000370656 WRAP73Q9P2S5 460 aaPredicted RBP16.67■□□□□ 0.26
RPF1-202ENST00000370656 MORC2Q9Y6X9 1032 aaPredicted RBP16.67■□□□□ 0.26
RPF1-202ENST00000370656 KANSL1LA0AUZ9 987 aa16.66■□□□□ 0.26
RPF1-202ENST00000370656 F8W810 466 aa16.66■□□□□ 0.26
RPF1-202ENST00000370656 LAMTOR5O43504 91 aa16.66■□□□□ 0.26
RPF1-202ENST00000370656 CCNT1O60563 726 aaKnown RBP16.66■□□□□ 0.26
RPF1-202ENST00000370656 SDHBP21912 280 aa16.66■□□□□ 0.26
RPF1-202ENST00000370656 GPC5P78333 572 aa16.66■□□□□ 0.26
RPF1-202ENST00000370656 PFKPQ01813 784 aa16.66■□□□□ 0.26
RPF1-202ENST00000370656 PRKCQQ04759 706 aa16.66■□□□□ 0.26
RPF1-202ENST00000370656 SAFBQ15424 915 aaKnown RBP eCLIP16.66■□□□□ 0.26
RPF1-202ENST00000370656 ZNF528Q3MIS6 628 aa16.66■□□□□ 0.26
RPF1-202ENST00000370656 NCAPH2Q6IBW4 605 aa16.66■□□□□ 0.26
RPF1-202ENST00000370656 FAM173BQ6P4H8 233 aa16.66■□□□□ 0.26
RPF1-202ENST00000370656 SLC27A1Q6PCB7 646 aa16.66■□□□□ 0.26
RPF1-202ENST00000370656 IFNLR1Q8IU57 520 aaPredicted RBP16.66■□□□□ 0.26
RPF1-202ENST00000370656 GPR161Q8N6U8 529 aaKnown RBP16.66■□□□□ 0.26
RPF1-202ENST00000370656 LEO1Q8WVC0 666 aaPredicted RBP16.66■□□□□ 0.26
RPF1-202ENST00000370656 TNFRSF25Q93038 417 aa16.66■□□□□ 0.26
RPF1-202ENST00000370656 CCDC43Q96MW1 224 aaKnown RBP16.66■□□□□ 0.26
RPF1-202ENST00000370656 CNTNAP3BQ96NU0 1288 aa16.66■□□□□ 0.26
RPF1-202ENST00000370656 CNTNAP3Q9BZ76 1288 aa16.66■□□□□ 0.26
RPF1-202ENST00000370656 NXF3Q9H4D5 531 aaKnown RBP16.66■□□□□ 0.26
RPF1-202ENST00000370656 SPATA6Q9NWH7 488 aaPredicted RBP16.66■□□□□ 0.26
RPF1-202ENST00000370656 DLL3Q9NYJ7 618 aa16.66■□□□□ 0.26
RPF1-202ENST00000370656 FBXO4Q9UKT5 387 aa16.66■□□□□ 0.26
RPF1-202ENST00000370656 CDH7Q9ULB5 785 aa16.66■□□□□ 0.26
RPF1-202ENST00000370656 PATJQ8NI35 1801 aa16.66■□□□□ 0.26
RPF1-202ENST00000370656 SPTLC1O15269 473 aa16.65■□□□□ 0.26
RPF1-202ENST00000370656 XYLBO75191 536 aa16.65■□□□□ 0.26
RPF1-202ENST00000370656 CD44P16070 742 aaKnown RBP16.65■□□□□ 0.26
RPF1-202ENST00000370656 ARF4P18085 180 aaPredicted RBP16.65■□□□□ 0.26
RPF1-202ENST00000370656 RPL17P18621 184 aaKnown RBP16.65■□□□□ 0.26
RPF1-202ENST00000370656 MAGEA9P43362 315 aa16.65■□□□□ 0.26
RPF1-202ENST00000370656 NASPP49321 788 aaPredicted RBP16.65■□□□□ 0.26
RPF1-202ENST00000370656 MBTD1Q05BQ5 628 aa16.65■□□□□ 0.26
RPF1-202ENST00000370656 SNW1Q13573 536 aaKnown RBP16.65■□□□□ 0.26
RPF1-202ENST00000370656 HSP90AA2PQ14568 343 aaPredicted RBP16.65■□□□□ 0.26
RPF1-202ENST00000370656 PPM1LQ5SGD2 360 aa16.65■□□□□ 0.26
RPF1-202ENST00000370656 PDXDC1Q6P996 788 aa16.65■□□□□ 0.26
RPF1-202ENST00000370656 PARM1Q6UWI2 310 aa16.65■□□□□ 0.26
RPF1-202ENST00000370656 GRASPQ7Z6J2 395 aaPredicted RBP16.65■□□□□ 0.26
RPF1-202ENST00000370656 NOSTRINQ8IVI9 506 aa16.65■□□□□ 0.26
RPF1-202ENST00000370656 DIS3L2Q8IYB7 885 aaKnown RBP16.65■□□□□ 0.26
RPF1-202ENST00000370656 SLFN12Q8IYM2 578 aa16.65■□□□□ 0.26
RPF1-202ENST00000370656 DCLK2Q8N568 766 aa16.65■□□□□ 0.26
RPF1-202ENST00000370656 FGF14Q92915 247 aa16.65■□□□□ 0.26
RPF1-202ENST00000370656 SECISBP2LQ93073 1101 aaKnown RBP16.65■□□□□ 0.26
RPF1-202ENST00000370656 DYDC2Q96IM9 177 aa16.65■□□□□ 0.26
RPF1-202ENST00000370656 RGL1Q9NZL6 768 aa16.65■□□□□ 0.26
RPF1-202ENST00000370656 NCDNQ9UBB6 729 aa16.65■□□□□ 0.26
RPF1-202ENST00000370656 PARP2Q9UGN5 583 aa16.65■□□□□ 0.26
RPF1-202ENST00000370656 KCNJ14Q9UNX9 436 aa16.65■□□□□ 0.26
RPF1-202ENST00000370656 EPG5Q9HCE0 2579 aa16.65■□□□□ 0.26
RPF1-202ENST00000370656 BTBD18B2RXH4 712 aa16.64■□□□□ 0.25
RPF1-202ENST00000370656 DGAT1O75907 488 aa16.64■□□□□ 0.25
RPF1-202ENST00000370656 MBD3O95983 291 aa16.64■□□□□ 0.25
RPF1-202ENST00000370656 GLULP15104 373 aa16.64■□□□□ 0.25
RPF1-202ENST00000370656 AKAP5P24588 427 aa16.64■□□□□ 0.25
RPF1-202ENST00000370656 HOXA9P31269 272 aa16.64■□□□□ 0.25
RPF1-202ENST00000370656 FOSBP53539 338 aa16.64■□□□□ 0.25
RPF1-202ENST00000370656 UBE2HP62256 183 aa16.64■□□□□ 0.25
RPF1-202ENST00000370656 CYP4A11Q02928 519 aa16.64■□□□□ 0.25
RPF1-202ENST00000370656 CTTNQ14247 550 aaKnown RBP16.64■□□□□ 0.25
RPF1-202ENST00000370656 UBXN2BQ14CS0 331 aa16.64■□□□□ 0.25
RPF1-202ENST00000370656 MLF2Q15773 248 aaPredicted RBP16.64■□□□□ 0.25
RPF1-202ENST00000370656 PRSS55Q6UWB4 352 aaPredicted RBP16.64■□□□□ 0.25
RPF1-202ENST00000370656 RSPO2Q6UXX9 243 aaPredicted RBP16.64■□□□□ 0.25
RPF1-202ENST00000370656 TPH2Q8IWU9 490 aa16.64■□□□□ 0.25
RPF1-202ENST00000370656 SUMF1Q8NBK3 374 aa16.64■□□□□ 0.25
RPF1-202ENST00000370656 GSTCDQ8NEC7 633 aa16.64■□□□□ 0.25
RPF1-202ENST00000370656 ST13P5Q8NFI4 369 aaPredicted RBP16.64■□□□□ 0.25
RPF1-202ENST00000370656 ATRIPQ8WXE1 791 aa16.64■□□□□ 0.25
RPF1-202ENST00000370656 TTPALQ9BTX7 342 aa16.64■□□□□ 0.25
RPF1-202ENST00000370656 NFKBIZQ9BYH8 718 aa16.64■□□□□ 0.25
RPF1-202ENST00000370656 OSBPL6Q9BZF3 934 aa16.64■□□□□ 0.25
RPF1-202ENST00000370656 FBXW11Q9UKB1 542 aa16.64■□□□□ 0.25
RPF1-202ENST00000370656 POLIQ9UNA4 740 aa16.64■□□□□ 0.25
RPF1-202ENST00000370656 FARP1Q9Y4F1 1045 aaPredicted RBP16.64■□□□□ 0.25
RPF1-202ENST00000370656 PCDHGA2Q9Y5H1 932 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms