RNA–Protein interactions for RNA: ENST00000370544.9

LMO4-202, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 5,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-202ENST00000370544 STILQ15468 1287 aa20.79■□□□□ 0.92
LMO4-202ENST00000370544 TAF1CQ15572 869 aaPredicted RBP20.79■□□□□ 0.92
LMO4-202ENST00000370544 SGSM1Q2NKQ1 1148 aa20.79■□□□□ 0.92
LMO4-202ENST00000370544 NOP14P78316 857 aaKnown RBP20.79■□□□□ 0.92
LMO4-202ENST00000370544 RASGRP2Q7LDG7 609 aa20.79■□□□□ 0.92
LMO4-202ENST00000370544 KCNF1Q9H3M0 494 aa20.79■□□□□ 0.92
LMO4-202ENST00000370544 GYG2O15488 501 aa20.79■□□□□ 0.92
LMO4-202ENST00000370544 DYNC1LI2O43237 492 aaPredicted RBP20.79■□□□□ 0.92
LMO4-202ENST00000370544 TERF2Q15554 542 aa20.79■□□□□ 0.92
LMO4-202ENST00000370544 ATL2Q8NHH9 583 aa20.79■□□□□ 0.92
LMO4-202ENST00000370544 RAPGEF5Q92565 580 aa20.79■□□□□ 0.92
LMO4-202ENST00000370544 RUBCNQ92622 972 aa20.79■□□□□ 0.92
LMO4-202ENST00000370544 PARK7Q99497 189 aaKnown RBP20.79■□□□□ 0.92
LMO4-202ENST00000370544 PLEKHA5Q9HAU0 1116 aa20.79■□□□□ 0.92
LMO4-202ENST00000370544 FHOD1Q9Y613 1164 aa20.79■□□□□ 0.92
LMO4-202ENST00000370544 SKIP12755 728 aa20.79■□□□□ 0.92
LMO4-202ENST00000370544 RPA1P27694 616 aa20.79■□□□□ 0.92
LMO4-202ENST00000370544 FXR1P51114 621 aaKnown RBP eCLIP20.79■□□□□ 0.92
LMO4-202ENST00000370544 POU5F1BQ06416 359 aa20.79■□□□□ 0.92
LMO4-202ENST00000370544 RBBP8NLQ8NC74 664 aaPredicted RBP20.79■□□□□ 0.92
LMO4-202ENST00000370544 TGS1Q96RS0 853 aaKnown RBP20.79■□□□□ 0.92
LMO4-202ENST00000370544 SENP7Q9BQF6 1050 aa20.79■□□□□ 0.92
LMO4-202ENST00000370544 KATNAL1Q9BW62 490 aa20.79■□□□□ 0.92
LMO4-202ENST00000370544 GMNCA6NCL1 334 aa20.78■□□□□ 0.92
LMO4-202ENST00000370544 ZNF185O15231 689 aa20.78■□□□□ 0.92
LMO4-202ENST00000370544 PRAMEF18Q5VWM3 479 aa20.78■□□□□ 0.92
LMO4-202ENST00000370544 CCNYL1Q8N7R7 359 aa20.78■□□□□ 0.92
LMO4-202ENST00000370544 AGBL1Q96MI9 1066 aa20.78■□□□□ 0.92
LMO4-202ENST00000370544 SPON2Q9BUD6 331 aa20.78■□□□□ 0.92
LMO4-202ENST00000370544 NRXN1Q9ULB1 1477 aa20.78■□□□□ 0.92
LMO4-202ENST00000370544 TECPR2O15040 1411 aa20.78■□□□□ 0.92
LMO4-202ENST00000370544 DIP2BQ9P265 1576 aa20.78■□□□□ 0.92
LMO4-202ENST00000370544 NNMTP40261 264 aa20.78■□□□□ 0.92
LMO4-202ENST00000370544 LARP7Q4G0J3 582 aaKnown RBP eCLIP20.78■□□□□ 0.92
LMO4-202ENST00000370544 KRT80Q6KB66 452 aa20.78■□□□□ 0.92
LMO4-202ENST00000370544 INTS5Q6P9B9 1019 aaKnown RBP20.78■□□□□ 0.92
LMO4-202ENST00000370544 MAGEB2O15479 319 aa20.78■□□□□ 0.92
LMO4-202ENST00000370544 ZNF189O75820 626 aaPredicted RBP20.78■□□□□ 0.92
LMO4-202ENST00000370544 KCNJ6P48051 423 aa20.78■□□□□ 0.92
LMO4-202ENST00000370544 PPP4CP60510 307 aa20.78■□□□□ 0.92
LMO4-202ENST00000370544 NAA30Q147X3 362 aaPredicted RBP20.78■□□□□ 0.92
LMO4-202ENST00000370544 SPATA2LQ8IUW3 424 aaPredicted RBP20.78■□□□□ 0.92
LMO4-202ENST00000370544 CCDC138Q96M89 665 aa20.78■□□□□ 0.92
LMO4-202ENST00000370544 LRRC1Q9BTT6 524 aa20.78■□□□□ 0.92
LMO4-202ENST00000370544 SARS2Q9NP81 518 aaKnown RBP20.78■□□□□ 0.92
LMO4-202ENST00000370544 WDR35Q9P2L0 1181 aa20.78■□□□□ 0.92
LMO4-202ENST00000370544 E5RI56 91 aa20.78■□□□□ 0.92
LMO4-202ENST00000370544 GRIK1P39086 918 aa20.78■□□□□ 0.92
LMO4-202ENST00000370544 PRAMEP78395 509 aa20.78■□□□□ 0.92
LMO4-202ENST00000370544 E4F1Q66K89 784 aaPredicted RBP20.78■□□□□ 0.92
LMO4-202ENST00000370544 PID1Q7Z2X4 250 aa20.78■□□□□ 0.92
LMO4-202ENST00000370544 FAF1Q9UNN5 650 aaPredicted RBP20.78■□□□□ 0.92
LMO4-202ENST00000370544 TADA3O75528 432 aa20.77■□□□□ 0.92
LMO4-202ENST00000370544 SLC25A27O95847 323 aa20.77■□□□□ 0.92
LMO4-202ENST00000370544 R3HDM1Q15032 1099 aaKnown RBP20.77■□□□□ 0.92
LMO4-202ENST00000370544 ANGPTL8Q6UXH0 198 aa20.77■□□□□ 0.92
LMO4-202ENST00000370544 MMTAG2Q9BU76 263 aaKnown RBP20.77■□□□□ 0.92
LMO4-202ENST00000370544 MRPL46Q9H2W6 279 aaKnown RBP20.77■□□□□ 0.92
LMO4-202ENST00000370544 ATP5HO75947 161 aa20.77■□□□□ 0.92
LMO4-202ENST00000370544 FGFR4P22455 802 aa20.77■□□□□ 0.92
LMO4-202ENST00000370544 DAGLBQ8NCG7 672 aa20.77■□□□□ 0.92
LMO4-202ENST00000370544 EPAS1Q99814 870 aa20.77■□□□□ 0.92
LMO4-202ENST00000370544 IRX2Q9BZI1 471 aaPredicted RBP20.77■□□□□ 0.92
LMO4-202ENST00000370544 KRT82Q9NSB4 513 aa20.77■□□□□ 0.92
LMO4-202ENST00000370544 TRIM33Q9UPN9 1127 aa20.77■□□□□ 0.92
LMO4-202ENST00000370544 KCNH4Q9UQ05 1017 aa20.77■□□□□ 0.92
LMO4-202ENST00000370544 PITPNM2Q9BZ72 1349 aa20.77■□□□□ 0.92
LMO4-202ENST00000370544 MAFGO15525 162 aa20.77■□□□□ 0.92
LMO4-202ENST00000370544 RPS12P25398 132 aaKnown RBP20.77■□□□□ 0.92
LMO4-202ENST00000370544 TPI1P60174 286 aa20.77■□□□□ 0.92
LMO4-202ENST00000370544 ESRRGP62508 458 aa20.77■□□□□ 0.92
LMO4-202ENST00000370544 HIF1AQ16665 826 aa20.77■□□□□ 0.92
LMO4-202ENST00000370544 MMS22LQ6ZRQ5 1243 aa20.77■□□□□ 0.92
LMO4-202ENST00000370544 SYDE1Q6ZW31 735 aaPredicted RBP20.77■□□□□ 0.92
LMO4-202ENST00000370544 KCTD17Q8N5Z5 321 aa20.77■□□□□ 0.92
LMO4-202ENST00000370544 CHST13Q8NET6 341 aa20.77■□□□□ 0.92
LMO4-202ENST00000370544 CCDC124Q96CT7 223 aaKnown RBP20.77■□□□□ 0.92
LMO4-202ENST00000370544 MS4A14Q96JA4 679 aa20.77■□□□□ 0.92
LMO4-202ENST00000370544 MOSPD1Q9UJG1 213 aa20.77■□□□□ 0.92
LMO4-202ENST00000370544 DPEP1P16444 411 aa20.77■□□□□ 0.91
LMO4-202ENST00000370544 STMN1P16949 149 aa20.77■□□□□ 0.91
LMO4-202ENST00000370544 GTF3C2Q8WUA4 911 aaPredicted RBP20.77■□□□□ 0.91
LMO4-202ENST00000370544 KCNH7Q9NS40 1196 aa20.77■□□□□ 0.91
LMO4-202ENST00000370544 VEPH1Q14D04 833 aa20.76■□□□□ 0.91
LMO4-202ENST00000370544 SMAD1Q15797 465 aaKnown RBP20.76■□□□□ 0.91
LMO4-202ENST00000370544 HIPK4Q8NE63 616 aa20.76■□□□□ 0.91
LMO4-202ENST00000370544 RAET1EQ8TD07 263 aa20.76■□□□□ 0.91
LMO4-202ENST00000370544 SLC13A1Q9BZW2 595 aa20.76■□□□□ 0.91
LMO4-202ENST00000370544 SCAF8Q9UPN6 1271 aaKnown RBP20.76■□□□□ 0.91
LMO4-202ENST00000370544 NEMP1O14524 444 aa20.76■□□□□ 0.91
LMO4-202ENST00000370544 HAUS5O94927 633 aa20.76■□□□□ 0.91
LMO4-202ENST00000370544 RGS7P49802 495 aa20.76■□□□□ 0.91
LMO4-202ENST00000370544 SNRPFP62306 86 aaKnown RBP20.76■□□□□ 0.91
LMO4-202ENST00000370544 COG1Q8WTW3 980 aa20.76■□□□□ 0.91
LMO4-202ENST00000370544 CYTH2Q99418 400 aa20.76■□□□□ 0.91
LMO4-202ENST00000370544 TRIM4Q9C037 500 aa20.76■□□□□ 0.91
LMO4-202ENST00000370544 PHF2O75151 1096 aa20.76■□□□□ 0.91
LMO4-202ENST00000370544 SPAG7O75391 227 aa20.76■□□□□ 0.91
LMO4-202ENST00000370544 HSD17B4P51659 736 aa20.76■□□□□ 0.91
LMO4-202ENST00000370544 CACNB2Q08289 660 aaPredicted RBP20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms