RNA–Protein interactions for RNA: ENST00000370025.8

PRPF38B-203, Transcript of pre-mRNA processing factor 38B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38B, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-203ENST00000370025 SOCS7O14512 581 aa10.74□□□□□ -0.69
PRPF38B-203ENST00000370025 GCLCP48506 637 aaPredicted RBP10.74□□□□□ -0.69
PRPF38B-203ENST00000370025 CPLX4Q7Z7G2 160 aa10.74□□□□□ -0.69
PRPF38B-203ENST00000370025 SPATA4Q8NEY3 305 aa10.74□□□□□ -0.69
PRPF38B-203ENST00000370025 ZNF483Q8TF39 744 aaPredicted RBP10.74□□□□□ -0.69
PRPF38B-203ENST00000370025 FGD4Q96M96 766 aa10.74□□□□□ -0.69
PRPF38B-203ENST00000370025 PORCNQ9H237 461 aa10.74□□□□□ -0.69
PRPF38B-203ENST00000370025 DHX33Q9H6R0 707 aaKnown RBP10.74□□□□□ -0.69
PRPF38B-203ENST00000370025 SIX2Q9NPC8 291 aa10.74□□□□□ -0.69
PRPF38B-203ENST00000370025 ZNF233A6NK53 670 aa10.73□□□□□ -0.69
PRPF38B-203ENST00000370025 BTBD19C9JJ37 291 aa10.73□□□□□ -0.69
PRPF38B-203ENST00000370025 ANKRD63C9JTQ0 380 aa10.73□□□□□ -0.69
PRPF38B-203ENST00000370025 P4HA2O15460 535 aa10.73□□□□□ -0.69
PRPF38B-203ENST00000370025 GFPT1Q06210 699 aaPredicted RBP10.73□□□□□ -0.69
PRPF38B-203ENST00000370025 CBWD6Q4V339 395 aa10.73□□□□□ -0.69
PRPF38B-203ENST00000370025 BRDTQ58F21 947 aaPredicted RBP10.73□□□□□ -0.69
PRPF38B-203ENST00000370025 CBWD3Q5JTY5 395 aa10.73□□□□□ -0.69
PRPF38B-203ENST00000370025 CBWD5Q5RIA9 395 aa10.73□□□□□ -0.69
PRPF38B-203ENST00000370025 CELF3Q5SZQ8 465 aaKnown RBP10.73□□□□□ -0.69
PRPF38B-203ENST00000370025 USP37Q86T82 979 aa10.73□□□□□ -0.69
PRPF38B-203ENST00000370025 POMGNT1Q8WZA1 660 aa10.73□□□□□ -0.69
PRPF38B-203ENST00000370025 GLG1Q92896 1179 aa10.73□□□□□ -0.69
PRPF38B-203ENST00000370025 MS4A4AQ96JQ5 239 aa10.73□□□□□ -0.69
PRPF38B-203ENST00000370025 RRAGCQ9HB90 399 aa10.73□□□□□ -0.69
PRPF38B-203ENST00000370025 CAPN6Q9Y6Q1 641 aa10.73□□□□□ -0.69
PRPF38B-203ENST00000370025 EMSYQ7Z589 1322 aa10.73□□□□□ -0.69
PRPF38B-203ENST00000370025 SMIM23A6NLE4 172 aa10.73□□□□□ -0.69
PRPF38B-203ENST00000370025 HNRNPDLO14979 420 aaKnown RBP10.73□□□□□ -0.69
PRPF38B-203ENST00000370025 STAT1P42224 750 aa10.73□□□□□ -0.69
PRPF38B-203ENST00000370025 INHBEP58166 350 aa10.73□□□□□ -0.69
PRPF38B-203ENST00000370025 STRN3Q13033 797 aa10.73□□□□□ -0.69
PRPF38B-203ENST00000370025 TTLL4Q14679 1199 aa10.73□□□□□ -0.69
PRPF38B-203ENST00000370025 FAM133BQ5BKY9 247 aaKnown RBP10.73□□□□□ -0.69
PRPF38B-203ENST00000370025 ANKRD23Q86SG2 305 aa10.73□□□□□ -0.69
PRPF38B-203ENST00000370025 VPS36Q86VN1 386 aa10.73□□□□□ -0.69
PRPF38B-203ENST00000370025 MORC4Q8TE76 937 aa10.73□□□□□ -0.69
PRPF38B-203ENST00000370025 TMEM143Q96AN5 459 aa10.73□□□□□ -0.69
PRPF38B-203ENST00000370025 PCYT2Q99447 389 aa10.73□□□□□ -0.69
PRPF38B-203ENST00000370025 INTS2Q9H0H0 1204 aaKnown RBP10.73□□□□□ -0.69
PRPF38B-203ENST00000370025 PPME1Q9Y570 386 aa10.73□□□□□ -0.69
PRPF38B-203ENST00000370025 IVNS1ABPQ9Y6Y0 642 aa10.73□□□□□ -0.69
PRPF38B-203ENST00000370025 GOLGA8IPA6NC78 632 aa10.73□□□□□ -0.69
PRPF38B-203ENST00000370025 GOLGA6L10A6NI86 522 aa10.73□□□□□ -0.69
PRPF38B-203ENST00000370025 GOLGA8JA6NMD2 632 aa10.73□□□□□ -0.69
PRPF38B-203ENST00000370025 RBAK-RBAKDNI3L0D1 243 aa10.73□□□□□ -0.69
PRPF38B-203ENST00000370025 CELF2O95319 508 aaKnown RBP10.73□□□□□ -0.69
PRPF38B-203ENST00000370025 SLC18A3Q16572 532 aa10.73□□□□□ -0.69
PRPF38B-203ENST00000370025 TRIM68Q6AZZ1 485 aa10.73□□□□□ -0.69
PRPF38B-203ENST00000370025 IQCEQ6IPM2 695 aa10.73□□□□□ -0.69
PRPF38B-203ENST00000370025 FBXO16Q8IX29 292 aaPredicted RBP10.73□□□□□ -0.69
PRPF38B-203ENST00000370025 KLHL7Q8IXQ5 586 aa10.73□□□□□ -0.69
PRPF38B-203ENST00000370025 DEPTORQ8TB45 409 aa10.73□□□□□ -0.69
PRPF38B-203ENST00000370025 LMBR1Q8WVP7 490 aa10.73□□□□□ -0.69
PRPF38B-203ENST00000370025 RBM12Q9NTZ6 932 aaKnown RBP10.73□□□□□ -0.69
PRPF38B-203ENST00000370025 ARHGAP28Q9P2N2 729 aa10.73□□□□□ -0.69
PRPF38B-203ENST00000370025 TACC1O75410 805 aa10.72□□□□□ -0.69
PRPF38B-203ENST00000370025 ARIH2O95376 493 aa10.72□□□□□ -0.69
PRPF38B-203ENST00000370025 TXNP10599 105 aaKnown RBP10.72□□□□□ -0.69
PRPF38B-203ENST00000370025 FERP16591 822 aa10.72□□□□□ -0.69
PRPF38B-203ENST00000370025 NAMPTP43490 491 aa10.72□□□□□ -0.69
PRPF38B-203ENST00000370025 SNRNP35Q16560 246 aaKnown RBP10.72□□□□□ -0.69
PRPF38B-203ENST00000370025 IRF2BP2Q7Z5L9 587 aa10.72□□□□□ -0.69
PRPF38B-203ENST00000370025 EXOC8Q8IYI6 725 aa10.72□□□□□ -0.69
PRPF38B-203ENST00000370025 SPATA33Q96N06 139 aa10.72□□□□□ -0.69
PRPF38B-203ENST00000370025 STK33Q9BYT3 514 aa10.72□□□□□ -0.69
PRPF38B-203ENST00000370025 STIM2Q9P246 746 aa10.72□□□□□ -0.69
PRPF38B-203ENST00000370025 DNAJC12Q9UKB3 198 aa10.72□□□□□ -0.69
PRPF38B-203ENST00000370025 PACSIN2Q9UNF0 486 aaPredicted RBP10.72□□□□□ -0.69
PRPF38B-203ENST00000370025 LRRIQ4A6NIV6 560 aa10.72□□□□□ -0.69
PRPF38B-203ENST00000370025 STRNO43815 780 aa10.72□□□□□ -0.69
PRPF38B-203ENST00000370025 GLI1P08151 1106 aa10.72□□□□□ -0.69
PRPF38B-203ENST00000370025 GARTP22102 1010 aa10.72□□□□□ -0.69
PRPF38B-203ENST00000370025 RFX1P22670 979 aa10.72□□□□□ -0.69
PRPF38B-203ENST00000370025 ADSSP30520 456 aa10.72□□□□□ -0.69
PRPF38B-203ENST00000370025 MDH1P40925 334 aaKnown RBP10.72□□□□□ -0.69
PRPF38B-203ENST00000370025 LIG4P49917 911 aa10.72□□□□□ -0.69
PRPF38B-203ENST00000370025 SCFD2Q8WU76 684 aa10.72□□□□□ -0.69
PRPF38B-203ENST00000370025 BRI3BPQ8WY22 251 aa10.72□□□□□ -0.69
PRPF38B-203ENST00000370025 GPR20Q99678 358 aa10.72□□□□□ -0.69
PRPF38B-203ENST00000370025 APEX2Q9UBZ4 518 aa10.72□□□□□ -0.69
PRPF38B-203ENST00000370025 ADAMTS1Q9UHI8 967 aa10.72□□□□□ -0.69
PRPF38B-203ENST00000370025 ADGRA3Q8IWK6 1321 aa10.72□□□□□ -0.69
PRPF38B-203ENST00000370025 TARSL2A2RTX5 802 aaKnown RBP10.72□□□□□ -0.69
PRPF38B-203ENST00000370025 PJA2O43164 708 aa10.72□□□□□ -0.69
PRPF38B-203ENST00000370025 HEXIM1O94992 359 aaKnown RBP10.72□□□□□ -0.69
PRPF38B-203ENST00000370025 ANXA13P27216 316 aa10.72□□□□□ -0.69
PRPF38B-203ENST00000370025 ARL2P36404 184 aa10.72□□□□□ -0.69
PRPF38B-203ENST00000370025 PRKCIP41743 596 aa10.72□□□□□ -0.69
PRPF38B-203ENST00000370025 EPHB4P54760 987 aa10.72□□□□□ -0.69
PRPF38B-203ENST00000370025 JAM2P57087 298 aa10.72□□□□□ -0.69
PRPF38B-203ENST00000370025 DLG4P78352 724 aa10.72□□□□□ -0.69
PRPF38B-203ENST00000370025 TARBP2Q15633 366 aaKnown RBP10.72□□□□□ -0.69
PRPF38B-203ENST00000370025 C10orf76Q5T2E6 689 aa10.72□□□□□ -0.69
PRPF38B-203ENST00000370025 GJB7Q6PEY0 223 aa10.72□□□□□ -0.69
PRPF38B-203ENST00000370025 TRIM58Q8NG06 486 aa10.72□□□□□ -0.69
PRPF38B-203ENST00000370025 KCNV2Q8TDN2 545 aa10.72□□□□□ -0.69
PRPF38B-203ENST00000370025 VTI1AQ96AJ9 217 aa10.72□□□□□ -0.69
PRPF38B-203ENST00000370025 SAAL1Q96ER3 474 aa10.72□□□□□ -0.69
PRPF38B-203ENST00000370025 ALS2CR12Q96Q35 445 aa10.72□□□□□ -0.69
PRPF38B-203ENST00000370025 LRRC37A2A6NM11 1700 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms