RNA–Protein interactions for RNA: ENST00000369797.7

PDCD11-201, Transcript of programmed cell death 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCD11, Length 6,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-201ENST00000369797 KDM4CQ9H3R0 1056 aa11.92□□□□□ -0.5
PDCD11-201ENST00000369797 PBRM1Q86U86 1689 aa11.91□□□□□ -0.5
PDCD11-201ENST00000369797 LMNAP02545 664 aaKnown RBP11.91□□□□□ -0.5
PDCD11-201ENST00000369797 HIST1H2AGP0C0S8 130 aaPredicted RBP11.91□□□□□ -0.5
PDCD11-201ENST00000369797 HIST1H2ADP20671 130 aa11.91□□□□□ -0.5
PDCD11-201ENST00000369797 AP3M2P53677 418 aa11.91□□□□□ -0.5
PDCD11-201ENST00000369797 PCSK7Q16549 785 aa11.91□□□□□ -0.5
PDCD11-201ENST00000369797 TRIM72Q6ZMU5 477 aa11.91□□□□□ -0.5
PDCD11-201ENST00000369797 SLC30A5Q8TAD4 765 aa11.91□□□□□ -0.5
PDCD11-201ENST00000369797 MTBPQ96DY7 904 aa11.91□□□□□ -0.5
PDCD11-201ENST00000369797 ZFYVE19Q96K21 471 aa11.91□□□□□ -0.5
PDCD11-201ENST00000369797 HIST1H2AHQ96KK5 128 aa11.91□□□□□ -0.5
PDCD11-201ENST00000369797 HIST1H2AJQ99878 128 aa11.91□□□□□ -0.5
PDCD11-201ENST00000369797 H2AFJQ9BTM1 129 aa11.91□□□□□ -0.5
PDCD11-201ENST00000369797 GPBP1L1Q9HC44 474 aaPredicted RBP11.91□□□□□ -0.5
PDCD11-201ENST00000369797 OVOS2A0A0G2JMS6 1433 aa11.91□□□□□ -0.5
PDCD11-201ENST00000369797 OVOS2A0A0J9YW53 1432 aa11.91□□□□□ -0.5
PDCD11-201ENST00000369797 OVOS2Q6IE36 1432 aa11.91□□□□□ -0.5
PDCD11-201ENST00000369797 HMOX2P30519 316 aa11.91□□□□□ -0.5
PDCD11-201ENST00000369797 LRRC74AQ0VAA2 488 aa11.91□□□□□ -0.5
PDCD11-201ENST00000369797 PKN3Q6P5Z2 889 aa11.91□□□□□ -0.5
PDCD11-201ENST00000369797 ARL8AQ96BM9 186 aa11.91□□□□□ -0.5
PDCD11-201ENST00000369797 SMARCAD1Q9H4L7 1026 aa11.91□□□□□ -0.5
PDCD11-201ENST00000369797 ITGA4P13612 1032 aa11.91□□□□□ -0.5
PDCD11-201ENST00000369797 PPP3CCP48454 512 aa11.91□□□□□ -0.5
PDCD11-201ENST00000369797 RBP5P82980 135 aa11.91□□□□□ -0.5
PDCD11-201ENST00000369797 NCAPHQ15003 741 aa11.91□□□□□ -0.5
PDCD11-201ENST00000369797 LRRC8EQ6NSJ5 796 aa11.91□□□□□ -0.5
PDCD11-201ENST00000369797 ENOSF1Q7L5Y1 443 aa11.91□□□□□ -0.5
PDCD11-201ENST00000369797 TBC1D19Q8N5T2 526 aa11.91□□□□□ -0.5
PDCD11-201ENST00000369797 CPA5Q8WXQ8 436 aa11.91□□□□□ -0.5
PDCD11-201ENST00000369797 LRRC37BQ96QE4 947 aa11.91□□□□□ -0.5
PDCD11-201ENST00000369797 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.91□□□□□ -0.5
PDCD11-201ENST00000369797 CCL15-CCL14A0A0B4J2E2 113 aa11.91□□□□□ -0.5
PDCD11-201ENST00000369797 GRAP2O75791 330 aa11.91□□□□□ -0.5
PDCD11-201ENST00000369797 EYA4O95677 639 aa11.91□□□□□ -0.5
PDCD11-201ENST00000369797 BRAFP15056 766 aa11.91□□□□□ -0.5
PDCD11-201ENST00000369797 CCL15Q16663 113 aa11.91□□□□□ -0.5
PDCD11-201ENST00000369797 RFX8Q6ZV50 586 aa11.91□□□□□ -0.5
PDCD11-201ENST00000369797 BHMTQ93088 406 aa11.91□□□□□ -0.5
PDCD11-201ENST00000369797 CLMNQ96JQ2 1002 aa11.91□□□□□ -0.5
PDCD11-201ENST00000369797 UNC45AQ9H3U1 944 aa11.91□□□□□ -0.5
PDCD11-201ENST00000369797 ZFATQ9P243 1243 aa11.91□□□□□ -0.5
PDCD11-201ENST00000369797 HAUS5O94927 633 aa11.91□□□□□ -0.5
PDCD11-201ENST00000369797 PDAP1Q13442 181 aaKnown RBP11.91□□□□□ -0.5
PDCD11-201ENST00000369797 ARHGEF7Q14155 803 aa11.91□□□□□ -0.5
PDCD11-201ENST00000369797 C18orf8Q96DM3 657 aa11.91□□□□□ -0.5
PDCD11-201ENST00000369797 SNF8Q96H20 258 aa11.91□□□□□ -0.5
PDCD11-201ENST00000369797 WNT8AQ9H1J5 351 aa11.91□□□□□ -0.5
PDCD11-201ENST00000369797 LATS2Q9NRM7 1088 aa11.91□□□□□ -0.5
PDCD11-201ENST00000369797 MAD2L2Q9UI95 211 aa11.91□□□□□ -0.5
PDCD11-201ENST00000369797 SCP2P22307 547 aa11.9□□□□□ -0.5
PDCD11-201ENST00000369797 OTUB1Q96FW1 271 aaPredicted RBP11.9□□□□□ -0.5
PDCD11-201ENST00000369797 FOPNLQ96NB1 174 aa11.9□□□□□ -0.5
PDCD11-201ENST00000369797 ACTR5Q9H9F9 607 aaPredicted RBP11.9□□□□□ -0.5
PDCD11-201ENST00000369797 DAGLAQ9Y4D2 1042 aa11.9□□□□□ -0.5
PDCD11-201ENST00000369797 CELF2O95319 508 aaKnown RBP11.9□□□□□ -0.5
PDCD11-201ENST00000369797 ARIH2O95376 493 aa11.9□□□□□ -0.5
PDCD11-201ENST00000369797 TFRCP02786 760 aaKnown RBP11.9□□□□□ -0.5
PDCD11-201ENST00000369797 TWF1Q12792 350 aa11.9□□□□□ -0.5
PDCD11-201ENST00000369797 ATPAF2Q8N5M1 289 aa11.9□□□□□ -0.5
PDCD11-201ENST00000369797 ATP11CQ8NB49 1132 aa11.9□□□□□ -0.5
PDCD11-201ENST00000369797 OSBPL9Q96SU4 736 aa11.9□□□□□ -0.5
PDCD11-201ENST00000369797 OSBPL5Q9H0X9 879 aaPredicted RBP11.9□□□□□ -0.5
PDCD11-201ENST00000369797 FAM49BQ9NUQ9 324 aa11.9□□□□□ -0.5
PDCD11-201ENST00000369797 HSPBP1Q9NZL4 362 aa11.9□□□□□ -0.5
PDCD11-201ENST00000369797 HDAC6Q9UBN7 1215 aa11.9□□□□□ -0.5
PDCD11-201ENST00000369797 CFAP74Q9C0B2 1584 aa11.9□□□□□ -0.5
PDCD11-201ENST00000369797 CLASP1Q7Z460 1538 aa11.9□□□□□ -0.5
PDCD11-201ENST00000369797 PRR23AA6NEV1 266 aa11.9□□□□□ -0.5
PDCD11-201ENST00000369797 MEFVO15553 781 aaPredicted RBP11.9□□□□□ -0.5
PDCD11-201ENST00000369797 ARFIP2P53365 341 aa11.9□□□□□ -0.5
PDCD11-201ENST00000369797 XKR3Q5GH77 459 aa11.9□□□□□ -0.5
PDCD11-201ENST00000369797 ST13P4Q8IZP2 240 aaPredicted RBP11.9□□□□□ -0.5
PDCD11-201ENST00000369797 AGPAT1Q99943 283 aa11.9□□□□□ -0.5
PDCD11-201ENST00000369797 FAM96AQ9H5X1 160 aa11.9□□□□□ -0.5
PDCD11-201ENST00000369797 SELENONQ9NZV5 590 aa11.9□□□□□ -0.5
PDCD11-201ENST00000369797 PCDHB8Q9UN66 801 aa11.9□□□□□ -0.5
PDCD11-201ENST00000369797 SETD1BQ9UPS6 1966 aaKnown RBP11.9□□□□□ -0.5
PDCD11-201ENST00000369797 C3orf70A6NLC5 250 aaPredicted RBP11.9□□□□□ -0.5
PDCD11-201ENST00000369797 RSPH10B2B2RC85 870 aa11.9□□□□□ -0.5
PDCD11-201ENST00000369797 RSPH10BP0C881 870 aa11.9□□□□□ -0.5
PDCD11-201ENST00000369797 PDGFRAP16234 1089 aa11.9□□□□□ -0.5
PDCD11-201ENST00000369797 NR1H3Q13133 447 aa11.9□□□□□ -0.5
PDCD11-201ENST00000369797 SEPT1Q8WYJ6 367 aa11.9□□□□□ -0.5
PDCD11-201ENST00000369797 GOLGA8RI6L899 631 aa11.9□□□□□ -0.51
PDCD11-201ENST00000369797 TEX33O43247 280 aa11.9□□□□□ -0.51
PDCD11-201ENST00000369797 LRRC71Q8N4P6 559 aa11.9□□□□□ -0.51
PDCD11-201ENST00000369797 B4GALNT2Q8NHY0 566 aa11.9□□□□□ -0.51
PDCD11-201ENST00000369797 EXOC4Q96A65 974 aa11.9□□□□□ -0.51
PDCD11-201ENST00000369797 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.9□□□□□ -0.515e-7■■■□□ 16.4
PDCD11-201ENST00000369797 FOXN1O15353 648 aa11.89□□□□□ -0.51
PDCD11-201ENST00000369797 GNASQ5JWF2 1037 aa11.89□□□□□ -0.51
PDCD11-201ENST00000369797 PLA2G4FQ68DD2 849 aa11.89□□□□□ -0.51
PDCD11-201ENST00000369797 SDE2Q6IQ49 451 aa11.89□□□□□ -0.51
PDCD11-201ENST00000369797 GLB1LQ6UWU2 654 aa11.89□□□□□ -0.51
PDCD11-201ENST00000369797 SRBD1Q8N5C6 995 aaKnown RBP11.89□□□□□ -0.51
PDCD11-201ENST00000369797 OR9Q1Q8NGQ5 310 aa11.89□□□□□ -0.51
PDCD11-201ENST00000369797 BTN2A2Q8WVV5 523 aa11.89□□□□□ -0.51
PDCD11-201ENST00000369797 TGS1Q96RS0 853 aaKnown RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms