RNA–Protein interactions for RNA: ENST00000369259.4

CHD1L-203, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best) BASIC

Gene CHD1L, Length 2,358 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-203ENST00000369259 AGPAT1Q99943 283 aa17.24■□□□□ 0.35
CHD1L-203ENST00000369259 TUBB6Q9BUF5 446 aa17.24■□□□□ 0.35
CHD1L-203ENST00000369259 ASTN1O14525 1302 aa17.23■□□□□ 0.35
CHD1L-203ENST00000369259 EXOC3O60645 756 aa17.23■□□□□ 0.35
CHD1L-203ENST00000369259 FTLP02792 175 aaPredicted RBP17.23■□□□□ 0.35
CHD1L-203ENST00000369259 ZCCHC18P0CG32 403 aa17.23■□□□□ 0.35
CHD1L-203ENST00000369259 PRDX5P30044 214 aa17.23■□□□□ 0.35
CHD1L-203ENST00000369259 SCNN1BP51168 640 aa17.23■□□□□ 0.35
CHD1L-203ENST00000369259 SLC18A1P54219 525 aa17.23■□□□□ 0.35
CHD1L-203ENST00000369259 GPC5P78333 572 aa17.23■□□□□ 0.35
CHD1L-203ENST00000369259 LIN52Q52LA3 116 aa17.23■□□□□ 0.35
CHD1L-203ENST00000369259 SPTY2D1Q68D10 685 aaPredicted RBP17.23■□□□□ 0.35
CHD1L-203ENST00000369259 TRABD2AQ86V40 505 aa17.23■□□□□ 0.35
CHD1L-203ENST00000369259 C1orf54Q8WWF1 131 aa17.23■□□□□ 0.35
CHD1L-203ENST00000369259 COA7Q96BR5 231 aa17.23■□□□□ 0.35
CHD1L-203ENST00000369259 CENPKQ9BS16 269 aa17.23■□□□□ 0.35
CHD1L-203ENST00000369259 TRAIPQ9BWF2 469 aa17.23■□□□□ 0.35
CHD1L-203ENST00000369259 ASCC2Q9H1I8 757 aaPredicted RBP17.23■□□□□ 0.35
CHD1L-203ENST00000369259 PREBQ9HCU5 417 aa17.23■□□□□ 0.35
CHD1L-203ENST00000369259 GALNT8Q9NY28 637 aa17.23■□□□□ 0.35
CHD1L-203ENST00000369259 ANAPC5Q9UJX4 755 aa17.23■□□□□ 0.35
CHD1L-203ENST00000369259 GRID1Q9ULK0 1009 aa17.23■□□□□ 0.35
CHD1L-203ENST00000369259 KAT6BQ8WYB5 2073 aa17.23■□□□□ 0.35
CHD1L-203ENST00000369259 CLIC2O15247 247 aa17.23■□□□□ 0.35
CHD1L-203ENST00000369259 DLATP10515 647 aaKnown RBP17.23■□□□□ 0.35
CHD1L-203ENST00000369259 KIF22Q14807 665 aa17.23■□□□□ 0.35
CHD1L-203ENST00000369259 DAB2IPQ5VWQ8 1189 aa17.23■□□□□ 0.35
CHD1L-203ENST00000369259 SYDE1Q6ZW31 735 aaPredicted RBP17.23■□□□□ 0.35
CHD1L-203ENST00000369259 OTOAQ7RTW8 1153 aa17.23■□□□□ 0.35
CHD1L-203ENST00000369259 SLC44A5Q8NCS7 719 aa17.23■□□□□ 0.35
CHD1L-203ENST00000369259 ZNF398Q8TD17 642 aa17.23■□□□□ 0.35
CHD1L-203ENST00000369259 LBHD1Q9BQE6 289 aaPredicted RBP17.23■□□□□ 0.35
CHD1L-203ENST00000369259 UBA5Q9GZZ9 404 aa17.23■□□□□ 0.35
CHD1L-203ENST00000369259 GYG2O15488 501 aa17.22■□□□□ 0.35
CHD1L-203ENST00000369259 SH3BGRP55822 239 aaPredicted RBP17.22■□□□□ 0.35
CHD1L-203ENST00000369259 RTP1P59025 263 aa17.22■□□□□ 0.35
CHD1L-203ENST00000369259 PTK6Q13882 451 aa17.22■□□□□ 0.35
CHD1L-203ENST00000369259 SGO2Q562F6 1265 aa17.22■□□□□ 0.35
CHD1L-203ENST00000369259 FYB2Q5VWT5 728 aa17.22■□□□□ 0.35
CHD1L-203ENST00000369259 STKLD1Q8NE28 680 aa17.22■□□□□ 0.35
CHD1L-203ENST00000369259 MIPOL1Q8TD10 442 aa17.22■□□□□ 0.35
CHD1L-203ENST00000369259 CNKSR2Q8WXI2 1034 aa17.22■□□□□ 0.35
CHD1L-203ENST00000369259 PTCD3Q96EY7 689 aaKnown RBP17.22■□□□□ 0.35
CHD1L-203ENST00000369259 PWWP2AQ96N64 755 aa17.22■□□□□ 0.35
CHD1L-203ENST00000369259 SMG5Q9UPR3 1016 aaKnown RBP17.22■□□□□ 0.35
CHD1L-203ENST00000369259 ZNF142P52746 1687 aaPredicted RBP17.22■□□□□ 0.35
CHD1L-203ENST00000369259 UMODL1Q5DID0 1318 aa17.22■□□□□ 0.35
CHD1L-203ENST00000369259 SPATA31A1Q5TZJ5 1347 aa17.22■□□□□ 0.35
CHD1L-203ENST00000369259 SLC26A4O43511 780 aa17.22■□□□□ 0.35
CHD1L-203ENST00000369259 SORBS3O60504 671 aa17.22■□□□□ 0.35
CHD1L-203ENST00000369259 BMT2Q1RMZ1 405 aa17.22■□□□□ 0.35
CHD1L-203ENST00000369259 PRUNE1Q86TP1 453 aa17.22■□□□□ 0.35
CHD1L-203ENST00000369259 MCUR1Q96AQ8 359 aa17.22■□□□□ 0.35
CHD1L-203ENST00000369259 RIOX1Q9H6W3 641 aa17.22■□□□□ 0.35
CHD1L-203ENST00000369259 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.22■□□□□ 0.35
CHD1L-203ENST00000369259 NUMBLQ9Y6R0 609 aa17.22■□□□□ 0.35
CHD1L-203ENST00000369259 SPOPO43791 374 aa17.21■□□□□ 0.35
CHD1L-203ENST00000369259 ATF2P15336 505 aa17.21■□□□□ 0.35
CHD1L-203ENST00000369259 IL6STP40189 918 aaPredicted RBP17.21■□□□□ 0.35
CHD1L-203ENST00000369259 FMO5P49326 533 aa17.21■□□□□ 0.35
CHD1L-203ENST00000369259 CDK7P50613 346 aa17.21■□□□□ 0.35
CHD1L-203ENST00000369259 NEK3P51956 506 aa17.21■□□□□ 0.35
CHD1L-203ENST00000369259 ARHGAP44Q17R89 818 aa17.21■□□□□ 0.35
CHD1L-203ENST00000369259 ZNF365Q70YC5 407 aa17.21■□□□□ 0.35
CHD1L-203ENST00000369259 VPS52Q8N1B4 723 aa17.21■□□□□ 0.35
CHD1L-203ENST00000369259 WDR60Q8WVS4 1066 aa17.21■□□□□ 0.35
CHD1L-203ENST00000369259 SLC4A9Q96Q91 983 aa17.21■□□□□ 0.35
CHD1L-203ENST00000369259 TUBGCP5Q96RT8 1024 aa17.21■□□□□ 0.35
CHD1L-203ENST00000369259 TRABDQ9H4I3 376 aa17.21■□□□□ 0.35
CHD1L-203ENST00000369259 NPHS2Q9NP85 383 aa17.21■□□□□ 0.35
CHD1L-203ENST00000369259 ARL8BQ9NVJ2 186 aa17.21■□□□□ 0.35
CHD1L-203ENST00000369259 IL1RAPL1Q9NZN1 696 aa17.21■□□□□ 0.35
CHD1L-203ENST00000369259 FSCN2O14926 492 aa17.21■□□□□ 0.34
CHD1L-203ENST00000369259 CLDN3O15551 220 aa17.21■□□□□ 0.34
CHD1L-203ENST00000369259 TOM1O60784 492 aa17.21■□□□□ 0.34
CHD1L-203ENST00000369259 TRIP13Q15645 432 aaPredicted RBP17.21■□□□□ 0.34
CHD1L-203ENST00000369259 PHLDB3Q6NSJ2 640 aa17.21■□□□□ 0.34
CHD1L-203ENST00000369259 FBXO33Q7Z6M2 555 aa17.21■□□□□ 0.34
CHD1L-203ENST00000369259 FAM186BQ8IYM0 893 aa17.21■□□□□ 0.34
CHD1L-203ENST00000369259 SLC20A1Q8WUM9 679 aa17.21■□□□□ 0.34
CHD1L-203ENST00000369259 NSL1Q96IY1 281 aa17.21■□□□□ 0.34
CHD1L-203ENST00000369259 C9orf72Q96LT7 481 aa17.21■□□□□ 0.34
CHD1L-203ENST00000369259 OLFM3Q96PB7 478 aa17.21■□□□□ 0.34
CHD1L-203ENST00000369259 MIS12Q9H081 205 aa17.21■□□□□ 0.34
CHD1L-203ENST00000369259 MMADHCQ9H3L0 296 aaPredicted RBP17.21■□□□□ 0.34
CHD1L-203ENST00000369259 APEX2Q9UBZ4 518 aa17.21■□□□□ 0.34
CHD1L-203ENST00000369259 CHORDC1Q9UHD1 332 aaPredicted RBP17.21■□□□□ 0.34
CHD1L-203ENST00000369259 ZMYM2Q9UBW7 1377 aa17.2■□□□□ 0.34
CHD1L-203ENST00000369259 MED24O75448 989 aa17.2■□□□□ 0.34
CHD1L-203ENST00000369259 MTA2O94776 668 aa17.2■□□□□ 0.34
CHD1L-203ENST00000369259 HAUS5O94927 633 aa17.2■□□□□ 0.34
CHD1L-203ENST00000369259 RPA3P35244 121 aaPredicted RBP17.2■□□□□ 0.34
CHD1L-203ENST00000369259 RFC4P35249 363 aa17.2■□□□□ 0.34
CHD1L-203ENST00000369259 PSMC2P35998 433 aaKnown RBP17.2■□□□□ 0.34
CHD1L-203ENST00000369259 ADCY8P40145 1251 aa17.2■□□□□ 0.34
CHD1L-203ENST00000369259 PLEKHG4Q58EX7 1191 aa17.2■□□□□ 0.34
CHD1L-203ENST00000369259 RELL1Q8IUW5 271 aa17.2■□□□□ 0.34
CHD1L-203ENST00000369259 SCYL3Q8IZE3 742 aa17.2■□□□□ 0.34
CHD1L-203ENST00000369259 ZNF75CPQ92670 426 aaPredicted RBP17.2■□□□□ 0.34
CHD1L-203ENST00000369259 REEP2Q9BRK0 252 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms