RNA–Protein interactions for RNA: ENST00000368671.3

CLRN3-201, Transcript of clarin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLRN3, Length 1,152 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3-201ENST00000368671 CHST7Q9NS84 486 aa11.45□□□□□ -0.58
CLRN3-201ENST00000368671 PRMT7Q9NVM4 692 aaPredicted RBP11.45□□□□□ -0.58
CLRN3-201ENST00000368671 IGSF9Q9P2J2 1179 aa11.45□□□□□ -0.58
CLRN3-201ENST00000368671 A0A1B0GUA9 196 aa11.44□□□□□ -0.58
CLRN3-201ENST00000368671 CASTOR2A6NHX0 329 aa11.44□□□□□ -0.58
CLRN3-201ENST00000368671 GPR37O15354 613 aa11.44□□□□□ -0.58
CLRN3-201ENST00000368671 MED24O75448 989 aa11.44□□□□□ -0.58
CLRN3-201ENST00000368671 SPATA31C1P0DKV0 1188 aa11.44□□□□□ -0.58
CLRN3-201ENST00000368671 XRCC6P12956 609 aaKnown RBP eCLIP11.44□□□□□ -0.58
CLRN3-201ENST00000368671 AOC1P19801 751 aa11.44□□□□□ -0.58
CLRN3-201ENST00000368671 RFX1P22670 979 aa11.44□□□□□ -0.58
CLRN3-201ENST00000368671 NEK4P51957 841 aa11.44□□□□□ -0.58
CLRN3-201ENST00000368671 HSP90AA2PQ14568 343 aaPredicted RBP11.44□□□□□ -0.58
CLRN3-201ENST00000368671 PADI6Q6TGC4 694 aa11.44□□□□□ -0.58
CLRN3-201ENST00000368671 PRSS55Q6UWB4 352 aaPredicted RBP11.44□□□□□ -0.58
CLRN3-201ENST00000368671 CYP26C1Q6V0L0 522 aa11.44□□□□□ -0.58
CLRN3-201ENST00000368671 FRMD5Q7Z6J6 570 aa11.44□□□□□ -0.58
CLRN3-201ENST00000368671 PACS2Q86VP3 889 aa11.44□□□□□ -0.58
CLRN3-201ENST00000368671 CATSPER3Q86XQ3 398 aa11.44□□□□□ -0.58
CLRN3-201ENST00000368671 CEP57Q86XR8 500 aa11.44□□□□□ -0.58
CLRN3-201ENST00000368671 HDAC7Q8WUI4 952 aa11.44□□□□□ -0.58
CLRN3-201ENST00000368671 ZNF707Q96C28 371 aaPredicted RBP11.44□□□□□ -0.58
CLRN3-201ENST00000368671 PAAF1Q9BRP4 392 aa11.44□□□□□ -0.58
CLRN3-201ENST00000368671 NT5C3AQ9H0P0 336 aa11.44□□□□□ -0.58
CLRN3-201ENST00000368671 SNTG2Q9NY99 539 aa11.44□□□□□ -0.58
CLRN3-201ENST00000368671 FNIP2Q9P278 1114 aa11.44□□□□□ -0.58
CLRN3-201ENST00000368671 CA14Q9ULX7 337 aa11.44□□□□□ -0.58
CLRN3-201ENST00000368671 ZMYM2Q9UBW7 1377 aa11.43□□□□□ -0.58
CLRN3-201ENST00000368671 WDFY4Q6ZS81 3184 aa11.43□□□□□ -0.58
CLRN3-201ENST00000368671 SF3B1O75533 1304 aaKnown RBP eCLIP11.43□□□□□ -0.58
CLRN3-201ENST00000368671 PROB1E7EW31 1015 aa11.43□□□□□ -0.58
CLRN3-201ENST00000368671 N4BP3O15049 544 aa11.43□□□□□ -0.58
CLRN3-201ENST00000368671 NBL1P41271 181 aa11.43□□□□□ -0.58
CLRN3-201ENST00000368671 CREMQ03060 361 aa11.43□□□□□ -0.58
CLRN3-201ENST00000368671 ST3GAL1Q11201 340 aa11.43□□□□□ -0.58
CLRN3-201ENST00000368671 TUSC3Q13454 348 aa11.43□□□□□ -0.58
CLRN3-201ENST00000368671 PRPF4BQ13523 1007 aaKnown RBP11.43□□□□□ -0.58
CLRN3-201ENST00000368671 SAFBQ15424 915 aaKnown RBP eCLIP11.43□□□□□ -0.58
CLRN3-201ENST00000368671 RTP2Q5QGT7 225 aa11.43□□□□□ -0.58
CLRN3-201ENST00000368671 CDCA2Q69YH5 1023 aaPredicted RBP11.43□□□□□ -0.58
CLRN3-201ENST00000368671 CCDC105Q8IYK2 499 aa11.43□□□□□ -0.58
CLRN3-201ENST00000368671 MCPH1Q8NEM0 835 aa11.43□□□□□ -0.58
CLRN3-201ENST00000368671 ST13P5Q8NFI4 369 aaPredicted RBP11.43□□□□□ -0.58
CLRN3-201ENST00000368671 DEPTORQ8TB45 409 aa11.43□□□□□ -0.58
CLRN3-201ENST00000368671 BSNDQ8WZ55 320 aa11.43□□□□□ -0.58
CLRN3-201ENST00000368671 PRIMPOLQ96LW4 560 aa11.43□□□□□ -0.58
CLRN3-201ENST00000368671 NACC1Q96RE7 527 aa11.43□□□□□ -0.58
CLRN3-201ENST00000368671 RTP3Q9BQQ7 232 aa11.43□□□□□ -0.58
CLRN3-201ENST00000368671 C2orf40Q9H1Z8 148 aa11.43□□□□□ -0.58
CLRN3-201ENST00000368671 PLEKHA4Q9H4M7 779 aa11.43□□□□□ -0.58
CLRN3-201ENST00000368671 PDZD7Q9H5P4 517 aa11.43□□□□□ -0.58
CLRN3-201ENST00000368671 ZDHHC7Q9NXF8 308 aa11.43□□□□□ -0.58
CLRN3-201ENST00000368671 EPS15L1Q9UBC2 864 aa11.43□□□□□ -0.58
CLRN3-201ENST00000368671 USP20Q9Y2K6 914 aa11.43□□□□□ -0.58
CLRN3-201ENST00000368671 KRBA1A5PL33 1030 aa11.42□□□□□ -0.58
CLRN3-201ENST00000368671 ARHGEF35A5YM69 484 aa11.42□□□□□ -0.58
CLRN3-201ENST00000368671 PRR23AA6NEV1 266 aa11.42□□□□□ -0.58
CLRN3-201ENST00000368671 ZMYND10O75800 440 aa11.42□□□□□ -0.58
CLRN3-201ENST00000368671 RECQL4O94761 1208 aa11.42□□□□□ -0.58
CLRN3-201ENST00000368671 KIF4AO95239 1232 aa11.42□□□□□ -0.58
CLRN3-201ENST00000368671 PRKCBP05771 671 aa11.42□□□□□ -0.58
CLRN3-201ENST00000368671 OR52Z1P0C646 297 aa11.42□□□□□ -0.58
CLRN3-201ENST00000368671 ANGPT1Q15389 498 aa11.42□□□□□ -0.58
CLRN3-201ENST00000368671 ZNF174Q15697 407 aa11.42□□□□□ -0.58
CLRN3-201ENST00000368671 MAPK6Q16659 721 aa11.42□□□□□ -0.58
CLRN3-201ENST00000368671 FAM171A1Q5VUB5 890 aa11.42□□□□□ -0.58
CLRN3-201ENST00000368671 LILRA6Q6PI73 481 aa11.42□□□□□ -0.58
CLRN3-201ENST00000368671 NOSTRINQ8IVI9 506 aa11.42□□□□□ -0.58
CLRN3-201ENST00000368671 SLC44A3Q8N4M1 653 aa11.42□□□□□ -0.58
CLRN3-201ENST00000368671 DTWD2Q8NBA8 298 aa11.42□□□□□ -0.58
CLRN3-201ENST00000368671 ERMNQ8TAM6 284 aa11.42□□□□□ -0.58
CLRN3-201ENST00000368671 ADPGKQ9BRR6 497 aa11.42□□□□□ -0.58
CLRN3-201ENST00000368671 POLR3CQ9BUI4 534 aaPredicted RBP11.42□□□□□ -0.58
CLRN3-201ENST00000368671 RHOBTB2Q9BYZ6 727 aa11.42□□□□□ -0.58
CLRN3-201ENST00000368671 PRKD2Q9BZL6 878 aa11.42□□□□□ -0.58
CLRN3-201ENST00000368671 CXCL16Q9H2A7 254 aa11.42□□□□□ -0.58
CLRN3-201ENST00000368671 FZD8Q9H461 694 aa11.42□□□□□ -0.58
CLRN3-201ENST00000368671 WNT16Q9UBV4 365 aa11.42□□□□□ -0.58
CLRN3-201ENST00000368671 PTGESO14684 152 aa11.41□□□□□ -0.58
CLRN3-201ENST00000368671 EDN1P05305 212 aa11.41□□□□□ -0.58
CLRN3-201ENST00000368671 THP07101 528 aa11.41□□□□□ -0.58
CLRN3-201ENST00000368671 SRFP11831 508 aa11.41□□□□□ -0.58
CLRN3-201ENST00000368671 LAMP2P13473 410 aa11.41□□□□□ -0.58
CLRN3-201ENST00000368671 FSHRP23945 695 aa11.41□□□□□ -0.58
CLRN3-201ENST00000368671 NAMPTP43490 491 aa11.41□□□□□ -0.58
CLRN3-201ENST00000368671 PSMD5Q16401 504 aa11.41□□□□□ -0.58
CLRN3-201ENST00000368671 FAM187BQ17R55 369 aa11.41□□□□□ -0.58
CLRN3-201ENST00000368671 PPM1LQ5SGD2 360 aa11.41□□□□□ -0.58
CLRN3-201ENST00000368671 LIN9Q5TKA1 542 aa11.41□□□□□ -0.58
CLRN3-201ENST00000368671 EEF1DP3Q658K8 133 aa11.41□□□□□ -0.58
CLRN3-201ENST00000368671 GRASPQ7Z6J2 395 aaPredicted RBP11.41□□□□□ -0.58
CLRN3-201ENST00000368671 CCDC83Q8IWF9 413 aa11.41□□□□□ -0.58
CLRN3-201ENST00000368671 GPR65Q8IYL9 337 aa11.41□□□□□ -0.58
CLRN3-201ENST00000368671 LNX1Q8TBB1 728 aaPredicted RBP11.41□□□□□ -0.58
CLRN3-201ENST00000368671 GPR152Q8TDT2 470 aa11.41□□□□□ -0.58
CLRN3-201ENST00000368671 NKD2Q969F2 451 aaPredicted RBP11.41□□□□□ -0.58
CLRN3-201ENST00000368671 C8orf76Q96K31 380 aa11.41□□□□□ -0.58
CLRN3-201ENST00000368671 TTPALQ9BTX7 342 aa11.41□□□□□ -0.58
CLRN3-201ENST00000368671 KIFC3Q9BVG8 833 aa11.41□□□□□ -0.58
CLRN3-201ENST00000368671 CCDC113Q9H0I3 377 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms