RNA–Protein interactions for RNA: ENST00000368406.2

EFNA1-201, Transcript of ephrin A1, humanhuman

TSL 1 (best) BASIC

Gene EFNA1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-201ENST00000368406 SPRED2Q7Z698 418 aa13.78□□□□□ -0.2
EFNA1-201ENST00000368406 GPD1LQ8N335 351 aa13.78□□□□□ -0.2
EFNA1-201ENST00000368406 XXYLT1Q8NBI6 393 aa13.78□□□□□ -0.2
EFNA1-201ENST00000368406 FBXO22Q8NEZ5 403 aa13.78□□□□□ -0.2
EFNA1-201ENST00000368406 FAM212AQ96EL1 285 aa13.78□□□□□ -0.2
EFNA1-201ENST00000368406 CASD1Q96PB1 797 aa13.78□□□□□ -0.2
EFNA1-201ENST00000368406 RPS6KC1Q96S38 1066 aa13.78□□□□□ -0.2
EFNA1-201ENST00000368406 ANP32EQ9BTT0 268 aa13.78□□□□□ -0.2
EFNA1-201ENST00000368406 PTPRHQ9HD43 1115 aa13.78□□□□□ -0.2
EFNA1-201ENST00000368406 TOPORSQ9NS56 1045 aaPredicted RBP13.78□□□□□ -0.2
EFNA1-201ENST00000368406 SNTG2Q9NY99 539 aa13.78□□□□□ -0.2
EFNA1-201ENST00000368406 LMCD1Q9NZU5 365 aa13.78□□□□□ -0.2
EFNA1-201ENST00000368406 RWDD2AQ9UIY3 292 aa13.78□□□□□ -0.2
EFNA1-201ENST00000368406 FRMD4BQ9Y2L6 1034 aa13.78□□□□□ -0.2
EFNA1-201ENST00000368406 HES2Q9Y543 173 aa13.78□□□□□ -0.2
EFNA1-201ENST00000368406 MRPL42Q9Y6G3 142 aaKnown RBP13.78□□□□□ -0.2
EFNA1-201ENST00000368406 REV3LO60673 3130 aa13.77□□□□□ -0.2
EFNA1-201ENST00000368406 H3BNC9 293 aa13.77□□□□□ -0.21
EFNA1-201ENST00000368406 CETN3O15182 167 aa13.77□□□□□ -0.21
EFNA1-201ENST00000368406 EXTL3O43909 919 aa13.77□□□□□ -0.21
EFNA1-201ENST00000368406 LPXNO60711 386 aa13.77□□□□□ -0.21
EFNA1-201ENST00000368406 FGFR1OPO95684 399 aaKnown RBP13.77□□□□□ -0.21
EFNA1-201ENST00000368406 AKAP5P24588 427 aa13.77□□□□□ -0.21
EFNA1-201ENST00000368406 GRM5P41594 1212 aa13.77□□□□□ -0.21
EFNA1-201ENST00000368406 ACOT2P49753 483 aa13.77□□□□□ -0.21
EFNA1-201ENST00000368406 GATMP50440 423 aa13.77□□□□□ -0.21
EFNA1-201ENST00000368406 ADAM9Q13443 819 aa13.77□□□□□ -0.21
EFNA1-201ENST00000368406 EDRF1Q3B7T1 1238 aa13.77□□□□□ -0.21
EFNA1-201ENST00000368406 CLLU1OSQ5K130 101 aa13.77□□□□□ -0.21
EFNA1-201ENST00000368406 ANKRD40Q6AI12 368 aa13.77□□□□□ -0.21
EFNA1-201ENST00000368406 CENPPQ6IPU0 288 aa13.77□□□□□ -0.21
EFNA1-201ENST00000368406 GLB1LQ6UWU2 654 aa13.77□□□□□ -0.21
EFNA1-201ENST00000368406 C11orf57Q6ZUT1 292 aaPredicted RBP13.77□□□□□ -0.21
EFNA1-201ENST00000368406 CSGALNACT2Q8N6G5 542 aa13.77□□□□□ -0.21
EFNA1-201ENST00000368406 CEP120Q8N960 986 aa13.77□□□□□ -0.21
EFNA1-201ENST00000368406 LPPQ93052 612 aa13.77□□□□□ -0.21
EFNA1-201ENST00000368406 ACAP3Q96P50 834 aa13.77□□□□□ -0.21
EFNA1-201ENST00000368406 C11orf84Q9BUA3 381 aaPredicted RBP13.77□□□□□ -0.21
EFNA1-201ENST00000368406 RPF1Q9H9Y2 349 aaKnown RBP13.77□□□□□ -0.21
EFNA1-201ENST00000368406 KIAA1586Q9HCI6 787 aa13.77□□□□□ -0.21
EFNA1-201ENST00000368406 UBN1Q9NPG3 1134 aa13.77□□□□□ -0.21
EFNA1-201ENST00000368406 MTUS1Q9ULD2 1270 aa13.77□□□□□ -0.21
EFNA1-201ENST00000368406 TRAF3IP3Q9Y228 551 aa13.77□□□□□ -0.21
EFNA1-201ENST00000368406 INPP5FQ9Y2H2 1132 aa13.77□□□□□ -0.21
EFNA1-201ENST00000368406 STYXL1Q9Y6J8 313 aa13.77□□□□□ -0.21
EFNA1-201ENST00000368406 NLRC5Q86WI3 1866 aa13.76□□□□□ -0.21
EFNA1-201ENST00000368406 RFXAPO00287 272 aa13.76□□□□□ -0.21
EFNA1-201ENST00000368406 ABLIM1O14639 778 aa13.76□□□□□ -0.21
EFNA1-201ENST00000368406 RECQL4O94761 1208 aa13.76□□□□□ -0.21
EFNA1-201ENST00000368406 CLTAP09496 248 aa13.76□□□□□ -0.21
EFNA1-201ENST00000368406 EPB41P11171 864 aaKnown RBP13.76□□□□□ -0.21
EFNA1-201ENST00000368406 ERCC5P28715 1186 aaPredicted RBP13.76□□□□□ -0.21
EFNA1-201ENST00000368406 ADSSP30520 456 aa13.76□□□□□ -0.21
EFNA1-201ENST00000368406 CTNNB1P35222 781 aa13.76□□□□□ -0.21
EFNA1-201ENST00000368406 PPP2R3AQ06190 1150 aa13.76□□□□□ -0.21
EFNA1-201ENST00000368406 CCDC40Q4G0X9 1142 aa13.76□□□□□ -0.21
EFNA1-201ENST00000368406 PAN2Q504Q3 1202 aaKnown RBP13.76□□□□□ -0.21
EFNA1-201ENST00000368406 CT47A1Q5JQC4 288 aaPredicted RBP13.76□□□□□ -0.21
EFNA1-201ENST00000368406 CREBRFQ8IUR6 639 aa13.76□□□□□ -0.21
EFNA1-201ENST00000368406 C12orf56Q8IXR9 622 aa13.76□□□□□ -0.21
EFNA1-201ENST00000368406 LRRC43Q8N309 656 aa13.76□□□□□ -0.21
EFNA1-201ENST00000368406 RDH13Q8NBN7 331 aa13.76□□□□□ -0.21
EFNA1-201ENST00000368406 SMG8Q8ND04 991 aaKnown RBP13.76□□□□□ -0.21
EFNA1-201ENST00000368406 URGCPQ8TCY9 931 aa13.76□□□□□ -0.21
EFNA1-201ENST00000368406 MRPL9Q9BYD2 267 aaKnown RBP13.76□□□□□ -0.21
EFNA1-201ENST00000368406 HAPLN2Q9GZV7 340 aa13.76□□□□□ -0.21
EFNA1-201ENST00000368406 TSPY26PQ9H489 355 aa13.76□□□□□ -0.21
EFNA1-201ENST00000368406 RSAD1Q9HA92 442 aa13.76□□□□□ -0.21
EFNA1-201ENST00000368406 AAASQ9NRG9 546 aa13.76□□□□□ -0.21
EFNA1-201ENST00000368406 RBAKQ9NYW8 714 aaPredicted RBP13.76□□□□□ -0.21
EFNA1-201ENST00000368406 CARNS1A5YM72 827 aa13.75□□□□□ -0.21
EFNA1-201ENST00000368406 ZNF233A6NK53 670 aa13.75□□□□□ -0.21
EFNA1-201ENST00000368406 OFD1O75665 1012 aa13.75□□□□□ -0.21
EFNA1-201ENST00000368406 CXCL8P10145 99 aa13.75□□□□□ -0.21
EFNA1-201ENST00000368406 IGFBP4P22692 258 aa13.75□□□□□ -0.21
EFNA1-201ENST00000368406 MLH1P40692 756 aa13.75□□□□□ -0.21
EFNA1-201ENST00000368406 TNFSF9P41273 254 aa13.75□□□□□ -0.21
EFNA1-201ENST00000368406 PMS1P54277 932 aaKnown RBP13.75□□□□□ -0.21
EFNA1-201ENST00000368406 FKBP3Q00688 224 aaKnown RBP13.75□□□□□ -0.21
EFNA1-201ENST00000368406 SNRNP35Q16560 246 aaKnown RBP13.75□□□□□ -0.21
EFNA1-201ENST00000368406 ZCWPW2Q504Y3 356 aa13.75□□□□□ -0.21
EFNA1-201ENST00000368406 ZBTB41Q5SVQ8 909 aa13.75□□□□□ -0.21
EFNA1-201ENST00000368406 LRSAM1Q6UWE0 723 aa13.75□□□□□ -0.21
EFNA1-201ENST00000368406 AGMOQ6ZNB7 445 aa13.75□□□□□ -0.21
EFNA1-201ENST00000368406 LRRC55Q6ZSA7 311 aa13.75□□□□□ -0.21
EFNA1-201ENST00000368406 AOPEPQ8N6M6 819 aa13.75□□□□□ -0.21
EFNA1-201ENST00000368406 HELQQ8TDG4 1101 aa13.75□□□□□ -0.21
EFNA1-201ENST00000368406 EEF2KMTQ96G04 330 aa13.75□□□□□ -0.21
EFNA1-201ENST00000368406 CWH43Q9H720 699 aa13.75□□□□□ -0.21
EFNA1-201ENST00000368406 KLK14Q9P0G3 267 aa13.75□□□□□ -0.21
EFNA1-201ENST00000368406 KANSL3Q9P2N6 904 aa13.75□□□□□ -0.21
EFNA1-201ENST00000368406 PCDHB12Q9Y5F1 795 aa13.75□□□□□ -0.21
EFNA1-201ENST00000368406 MTCH2Q9Y6C9 303 aa13.75□□□□□ -0.21
EFNA1-201ENST00000368406 CITO14578 2027 aa13.75□□□□□ -0.21
EFNA1-201ENST00000368406 BECN2A8MW95 431 aa13.74□□□□□ -0.21
EFNA1-201ENST00000368406 INPPL1O15357 1258 aa13.74□□□□□ -0.21
EFNA1-201ENST00000368406 KRT13P13646 458 aa13.74□□□□□ -0.21
EFNA1-201ENST00000368406 LAG3P18627 525 aa13.74□□□□□ -0.21
EFNA1-201ENST00000368406 PSMC2P35998 433 aaKnown RBP13.74□□□□□ -0.21
EFNA1-201ENST00000368406 ZNF165P49910 485 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms