RNA–Protein interactions for RNA: ENST00000368213.9

PTPRK-205, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-205ENST00000368213 STX1BP61266 288 aa11.41□□□□□ -0.58
PTPRK-205ENST00000368213 SF3A3Q12874 501 aaKnown RBP eCLIP11.41□□□□□ -0.581e-6■■■■□ 21.5
PTPRK-205ENST00000368213 APOBEC3HQ6NTF7 200 aaKnown RBP11.41□□□□□ -0.58
PTPRK-205ENST00000368213 DNAJB3Q8WWF6 145 aa11.41□□□□□ -0.58
PTPRK-205ENST00000368213 OSMRQ99650 979 aa11.41□□□□□ -0.58
PTPRK-205ENST00000368213 HEMGNQ9BXL5 484 aa11.41□□□□□ -0.58
PTPRK-205ENST00000368213 IDI2Q9BXS1 227 aa11.41□□□□□ -0.58
PTPRK-205ENST00000368213 KANSL3Q9P2N6 904 aa11.41□□□□□ -0.58
PTPRK-205ENST00000368213 RSPH10B2B2RC85 870 aa11.4□□□□□ -0.58
PTPRK-205ENST00000368213 RSPH10BP0C881 870 aa11.4□□□□□ -0.58
PTPRK-205ENST00000368213 AMPD2Q01433 879 aa11.4□□□□□ -0.58
PTPRK-205ENST00000368213 SLC35F6Q8N357 371 aa11.4□□□□□ -0.58
PTPRK-205ENST00000368213 ZNF564Q8TBZ8 553 aaPredicted RBP11.4□□□□□ -0.58
PTPRK-205ENST00000368213 DPP3Q9NY33 737 aa11.4□□□□□ -0.58
PTPRK-205ENST00000368213 DNAJC6O75061 913 aa11.4□□□□□ -0.58
PTPRK-205ENST00000368213 CKMP06732 381 aa11.4□□□□□ -0.58
PTPRK-205ENST00000368213 SCP2P22307 547 aa11.4□□□□□ -0.58
PTPRK-205ENST00000368213 RPA1P27694 616 aa11.4□□□□□ -0.58
PTPRK-205ENST00000368213 SHMT1P34896 483 aa11.4□□□□□ -0.58
PTPRK-205ENST00000368213 PSEN2P49810 448 aa11.4□□□□□ -0.58
PTPRK-205ENST00000368213 ALDH5A1P51649 535 aaPredicted RBP11.4□□□□□ -0.58
PTPRK-205ENST00000368213 PLTPP55058 493 aa11.4□□□□□ -0.58
PTPRK-205ENST00000368213 BCAR1P56945 870 aa11.4□□□□□ -0.58
PTPRK-205ENST00000368213 ACRBPQ8NEB7 543 aa11.4□□□□□ -0.58
PTPRK-205ENST00000368213 CCSER1Q9C0I3 900 aa11.4□□□□□ -0.58
PTPRK-205ENST00000368213 PRDM10Q9NQV6 1147 aa11.4□□□□□ -0.58
PTPRK-205ENST00000368213 LGALS16A8MUM7 142 aa11.4□□□□□ -0.58
PTPRK-205ENST00000368213 SLC16A3O15427 465 aaKnown RBP11.4□□□□□ -0.58
PTPRK-205ENST00000368213 NOL3O60936 208 aaKnown RBP11.4□□□□□ -0.58
PTPRK-205ENST00000368213 THP07101 528 aa11.4□□□□□ -0.58
PTPRK-205ENST00000368213 HOXC6P09630 235 aa11.4□□□□□ -0.58
PTPRK-205ENST00000368213 MBL2P11226 248 aaPredicted RBP11.4□□□□□ -0.58
PTPRK-205ENST00000368213 TAP1Q03518 808 aa11.4□□□□□ -0.58
PTPRK-205ENST00000368213 MMEL1Q495T6 779 aa11.4□□□□□ -0.58
PTPRK-205ENST00000368213 IQSEC1Q6DN90 963 aa11.4□□□□□ -0.58
PTPRK-205ENST00000368213 C18orf8Q96DM3 657 aa11.4□□□□□ -0.58
PTPRK-205ENST00000368213 WNK4Q96J92 1243 aa11.4□□□□□ -0.58
PTPRK-205ENST00000368213 PARVAQ9NVD7 372 aa11.4□□□□□ -0.58
PTPRK-205ENST00000368213 SNX2O60749 519 aa11.4□□□□□ -0.58
PTPRK-205ENST00000368213 FAM200BP0CF97 657 aa11.4□□□□□ -0.58
PTPRK-205ENST00000368213 TGFB3P10600 412 aa11.4□□□□□ -0.58
PTPRK-205ENST00000368213 BEX3Q00994 111 aa11.4□□□□□ -0.58
PTPRK-205ENST00000368213 ELAVL2Q12926 359 aaKnown RBP11.4□□□□□ -0.58
PTPRK-205ENST00000368213 ARHGEF7Q14155 803 aa11.4□□□□□ -0.58
PTPRK-205ENST00000368213 ARHGAP24Q8N264 748 aa11.4□□□□□ -0.58
PTPRK-205ENST00000368213 RNF217Q8TC41 542 aa11.4□□□□□ -0.58
PTPRK-205ENST00000368213 ARHGEF2Q92974 986 aaKnown RBP11.4□□□□□ -0.58
PTPRK-205ENST00000368213 RNF25Q96BH1 459 aaPredicted RBP11.4□□□□□ -0.58
PTPRK-205ENST00000368213 PDCD2LQ9BRP1 358 aa11.4□□□□□ -0.58
PTPRK-205ENST00000368213 NDFIP2Q9NV92 336 aa11.4□□□□□ -0.58
PTPRK-205ENST00000368213 CALCOCO1Q9P1Z2 691 aa11.4□□□□□ -0.58
PTPRK-205ENST00000368213 NWD1Q149M9 1564 aa11.4□□□□□ -0.59
PTPRK-205ENST00000368213 ITGB3P05106 788 aa11.4□□□□□ -0.59
PTPRK-205ENST00000368213 RAB27AP51159 221 aa11.4□□□□□ -0.59
PTPRK-205ENST00000368213 ANTXR2P58335 489 aa11.4□□□□□ -0.59
PTPRK-205ENST00000368213 SLMAPQ14BN4 828 aa11.4□□□□□ -0.59
PTPRK-205ENST00000368213 THEMIS2Q5TEJ8 643 aa11.4□□□□□ -0.59
PTPRK-205ENST00000368213 CHSY1Q86X52 802 aa11.4□□□□□ -0.59
PTPRK-205ENST00000368213 HASPINQ8TF76 798 aa11.4□□□□□ -0.59
PTPRK-205ENST00000368213 KIFC3Q9BVG8 833 aa11.4□□□□□ -0.59
PTPRK-205ENST00000368213 SENP2Q9HC62 589 aa11.4□□□□□ -0.59
PTPRK-205ENST00000368213 CCDC160A6NGH7 325 aa11.39□□□□□ -0.59
PTPRK-205ENST00000368213 LRRC53A6NM62 1247 aa11.39□□□□□ -0.59
PTPRK-205ENST00000368213 ARP10275 920 aa11.39□□□□□ -0.59
PTPRK-205ENST00000368213 ZFXP17010 805 aaPredicted RBP11.39□□□□□ -0.59
PTPRK-205ENST00000368213 CXCR5P32302 372 aa11.39□□□□□ -0.59
PTPRK-205ENST00000368213 ADCYAP1R1P41586 468 aa11.39□□□□□ -0.59
PTPRK-205ENST00000368213 PRAMEP78395 509 aa11.39□□□□□ -0.59
PTPRK-205ENST00000368213 ZC2HC1CQ53FD0 456 aaPredicted RBP11.39□□□□□ -0.59
PTPRK-205ENST00000368213 TAF2Q6P1X5 1199 aa11.39□□□□□ -0.59
PTPRK-205ENST00000368213 CPB2Q96IY4 423 aa11.39□□□□□ -0.59
PTPRK-205ENST00000368213 AFF4Q9UHB7 1163 aaKnown RBP11.39□□□□□ -0.59
PTPRK-205ENST00000368213 KIAA1210Q9ULL0 1709 aa11.39□□□□□ -0.59
PTPRK-205ENST00000368213 SLC15A5A6NIM6 579 aa11.39□□□□□ -0.59
PTPRK-205ENST00000368213 CYP26A1O43174 497 aa11.39□□□□□ -0.59
PTPRK-205ENST00000368213 ACADSBP45954 432 aa11.39□□□□□ -0.59
PTPRK-205ENST00000368213 CDH6P55285 790 aa11.39□□□□□ -0.59
PTPRK-205ENST00000368213 TAF1BQ53T94 588 aaPredicted RBP11.39□□□□□ -0.59
PTPRK-205ENST00000368213 TTC19Q6DKK2 380 aaPredicted RBP11.39□□□□□ -0.59
PTPRK-205ENST00000368213 ZNF280DQ6N043 979 aa11.39□□□□□ -0.59
PTPRK-205ENST00000368213 BHMTQ93088 406 aa11.39□□□□□ -0.59
PTPRK-205ENST00000368213 DEFB118Q96PH6 123 aa11.39□□□□□ -0.59
PTPRK-205ENST00000368213 SOWAHDA6NJG2 315 aa11.39□□□□□ -0.59
PTPRK-205ENST00000368213 NDUFA10O95299 355 aa11.39□□□□□ -0.59
PTPRK-205ENST00000368213 CHEK2O96017 543 aa11.39□□□□□ -0.59
PTPRK-205ENST00000368213 FTLP02792 175 aaPredicted RBP11.39□□□□□ -0.59
PTPRK-205ENST00000368213 MYL4P12829 197 aa11.39□□□□□ -0.59
PTPRK-205ENST00000368213 CYP11B2P19099 503 aa11.39□□□□□ -0.59
PTPRK-205ENST00000368213 U2AF2P26368 475 aaKnown RBP eCLIP11.39□□□□□ -0.599e-7■■□□□ 13.8
PTPRK-205ENST00000368213 AVPR1AP37288 418 aa11.39□□□□□ -0.59
PTPRK-205ENST00000368213 CDH18Q13634 790 aa11.39□□□□□ -0.59
PTPRK-205ENST00000368213 ELF2Q15723 593 aa11.39□□□□□ -0.59
PTPRK-205ENST00000368213 PPFIBP2Q8ND30 876 aa11.39□□□□□ -0.59
PTPRK-205ENST00000368213 POLR3CQ9BUI4 534 aaPredicted RBP11.39□□□□□ -0.59
PTPRK-205ENST00000368213 C17orf75Q9HAS0 396 aa11.39□□□□□ -0.59
PTPRK-205ENST00000368213 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.39□□□□□ -0.59
PTPRK-205ENST00000368213 ADGRB1O14514 1584 aa11.39□□□□□ -0.59
PTPRK-205ENST00000368213 DEPDC5O75140 1603 aa11.39□□□□□ -0.59
PTPRK-205ENST00000368213 INSRRP14616 1297 aa11.39□□□□□ -0.59
PTPRK-205ENST00000368213 RPL10AP62906 217 aaKnown RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms