RNA–Protein interactions for RNA: ENST00000368147.8

SPTA1-201, Transcript of spectrin alpha, erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTA1, Length 7,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-201ENST00000368147 C6orf118Q5T5N4 469 aa7.47□□□□□ -1.21
SPTA1-201ENST00000368147 NAF1Q96HR8 494 aaKnown RBP7.47□□□□□ -1.21
SPTA1-201ENST00000368147 EPAS1Q99814 870 aa7.47□□□□□ -1.21
SPTA1-201ENST00000368147 EPB41L5Q9HCM4 733 aa7.47□□□□□ -1.21
SPTA1-201ENST00000368147 PRPF3O43395 683 aaKnown RBP7.47□□□□□ -1.21
SPTA1-201ENST00000368147 TRPA1O75762 1119 aa7.47□□□□□ -1.21
SPTA1-201ENST00000368147 CHEK2O96017 543 aa7.47□□□□□ -1.21
SPTA1-201ENST00000368147 EIF2S1P05198 315 aaKnown RBP7.47□□□□□ -1.21
SPTA1-201ENST00000368147 DDX5P17844 614 aaKnown RBP7.47□□□□□ -1.21
SPTA1-201ENST00000368147 ABCD1P33897 745 aa7.47□□□□□ -1.21
SPTA1-201ENST00000368147 QRICH1Q2TAL8 776 aa7.47□□□□□ -1.21
SPTA1-201ENST00000368147 EPHA10Q5JZY3 1008 aa7.47□□□□□ -1.21
SPTA1-201ENST00000368147 C10orf120Q5SQS8 335 aa7.47□□□□□ -1.21
SPTA1-201ENST00000368147 CDR2LQ86X02 465 aaPredicted RBP7.47□□□□□ -1.21
SPTA1-201ENST00000368147 RAB42Q8N4Z0 105 aa7.47□□□□□ -1.21
SPTA1-201ENST00000368147 RNF25Q96BH1 459 aaPredicted RBP7.47□□□□□ -1.21
SPTA1-201ENST00000368147 CNBD2Q96M20 576 aa7.47□□□□□ -1.21
SPTA1-201ENST00000368147 BRIP1Q9BX63 1249 aa7.47□□□□□ -1.21
SPTA1-201ENST00000368147 ADAM22Q9P0K1 906 aa7.47□□□□□ -1.21
SPTA1-201ENST00000368147 AGAP1Q9UPQ3 857 aa7.47□□□□□ -1.21
SPTA1-201ENST00000368147 SPDYE5A6NIY4 337 aa7.46□□□□□ -1.21
SPTA1-201ENST00000368147 PP2D1A8MPX8 630 aa7.46□□□□□ -1.21
SPTA1-201ENST00000368147 UBXN8O00124 270 aa7.46□□□□□ -1.21
SPTA1-201ENST00000368147 ECEL1O95672 775 aa7.46□□□□□ -1.21
SPTA1-201ENST00000368147 ADRA2BP18089 450 aa7.46□□□□□ -1.21
SPTA1-201ENST00000368147 CMA1P23946 247 aa7.46□□□□□ -1.21
SPTA1-201ENST00000368147 SPDYE7PQ495Y7 208 aa7.46□□□□□ -1.21
SPTA1-201ENST00000368147 BTN2A2Q8WVV5 523 aa7.46□□□□□ -1.21
SPTA1-201ENST00000368147 PLEKHF1Q96S99 279 aa7.46□□□□□ -1.21
SPTA1-201ENST00000368147 DDX50Q9BQ39 737 aaKnown RBP7.46□□□□□ -1.21
SPTA1-201ENST00000368147 ING2Q9H160 280 aa7.46□□□□□ -1.21
SPTA1-201ENST00000368147 C2orf40Q9H1Z8 148 aa7.46□□□□□ -1.21
SPTA1-201ENST00000368147 TUBB1Q9H4B7 451 aa7.46□□□□□ -1.21
SPTA1-201ENST00000368147 PCDHA13Q9Y5I0 950 aa7.46□□□□□ -1.21
SPTA1-201ENST00000368147 EPN1Q9Y6I3 576 aaPredicted RBP7.46□□□□□ -1.21
SPTA1-201ENST00000368147 OAS2P29728 719 aaKnown RBP7.46□□□□□ -1.21
SPTA1-201ENST00000368147 ATXN3P54252 364 aaPredicted RBP7.46□□□□□ -1.21
SPTA1-201ENST00000368147 PRAMEP78395 509 aa7.46□□□□□ -1.21
SPTA1-201ENST00000368147 PRR5LQ6MZQ0 368 aa7.46□□□□□ -1.21
SPTA1-201ENST00000368147 STKLD1Q8NE28 680 aa7.46□□□□□ -1.21
SPTA1-201ENST00000368147 OXER1Q8TDS5 423 aa7.46□□□□□ -1.21
SPTA1-201ENST00000368147 RASSF5Q8WWW0 418 aa7.46□□□□□ -1.21
SPTA1-201ENST00000368147 SPZ1Q9BXG8 430 aa7.46□□□□□ -1.21
SPTA1-201ENST00000368147 ASNSD1Q9NWL6 643 aa7.46□□□□□ -1.21
SPTA1-201ENST00000368147 KIF17Q9P2E2 1029 aa7.46□□□□□ -1.21
SPTA1-201ENST00000368147 AGO2Q9UKV8 859 aaKnown RBP7.46□□□□□ -1.21
SPTA1-201ENST00000368147 GLI2P10070 1586 aa7.46□□□□□ -1.21
SPTA1-201ENST00000368147 ANKRD12Q6UB98 2062 aa7.46□□□□□ -1.21
SPTA1-201ENST00000368147 GOLGA8KD6RF30 607 aa7.46□□□□□ -1.21
SPTA1-201ENST00000368147 RASSF9O75901 435 aa7.46□□□□□ -1.21
SPTA1-201ENST00000368147 MT-ND3P03897 115 aa7.46□□□□□ -1.21
SPTA1-201ENST00000368147 EIF4A3P38919 411 aaKnown RBP7.46□□□□□ -1.21
SPTA1-201ENST00000368147 NBPF20Q3BBV1 942 aa7.46□□□□□ -1.21
SPTA1-201ENST00000368147 RD3Q7Z3Z2 195 aa7.46□□□□□ -1.21
SPTA1-201ENST00000368147 ZC3H18Q86VM9 953 aaKnown RBP7.46□□□□□ -1.21
SPTA1-201ENST00000368147 TAGAPQ8N103 731 aa7.46□□□□□ -1.21
SPTA1-201ENST00000368147 DHX38Q92620 1227 aaKnown RBP7.46□□□□□ -1.21
SPTA1-201ENST00000368147 EFHD2Q96C19 240 aaPredicted RBP7.46□□□□□ -1.21
SPTA1-201ENST00000368147 SLC13A1Q9BZW2 595 aa7.46□□□□□ -1.21
SPTA1-201ENST00000368147 SYBUQ9NX95 663 aa7.46□□□□□ -1.21
SPTA1-201ENST00000368147 SNX9Q9Y5X1 595 aa7.46□□□□□ -1.21
SPTA1-201ENST00000368147 CAMSAP1Q5T5Y3 1602 aa7.46□□□□□ -1.22
SPTA1-201ENST00000368147 HNRNPRO43390 633 aaKnown RBP7.46□□□□□ -1.22
SPTA1-201ENST00000368147 S100A5P33763 92 aa7.46□□□□□ -1.22
SPTA1-201ENST00000368147 ORC1Q13415 861 aa7.46□□□□□ -1.22
SPTA1-201ENST00000368147 ARHGEF7Q14155 803 aa7.46□□□□□ -1.22
SPTA1-201ENST00000368147 ZSCAN26Q16670 478 aa7.46□□□□□ -1.22
SPTA1-201ENST00000368147 CDC42EP5Q6NZY7 148 aa7.46□□□□□ -1.22
SPTA1-201ENST00000368147 DDIASQ8IXT1 998 aa7.46□□□□□ -1.22
SPTA1-201ENST00000368147 HIPK4Q8NE63 616 aa7.46□□□□□ -1.22
SPTA1-201ENST00000368147 SH3GL1Q99961 368 aa7.46□□□□□ -1.22
SPTA1-201ENST00000368147 VPS11Q9H270 941 aa7.46□□□□□ -1.22
SPTA1-201ENST00000368147 DNAJC12Q9UKB3 198 aa7.46□□□□□ -1.22
SPTA1-201ENST00000368147 ITGB1BP2Q9UKP3 347 aa7.46□□□□□ -1.22
SPTA1-201ENST00000368147 ABCA8O94911 1581 aa7.46□□□□□ -1.22
SPTA1-201ENST00000368147 TRAPPC3O43617 180 aa7.46□□□□□ -1.22
SPTA1-201ENST00000368147 ADCY3O60266 1144 aa7.46□□□□□ -1.22
SPTA1-201ENST00000368147 WDR47O94967 919 aa7.46□□□□□ -1.22
SPTA1-201ENST00000368147 KPNA2P52292 529 aaKnown RBP7.46□□□□□ -1.22
SPTA1-201ENST00000368147 VPS72Q15906 364 aa7.46□□□□□ -1.22
SPTA1-201ENST00000368147 UBA3Q8TBC4 463 aa7.46□□□□□ -1.22
SPTA1-201ENST00000368147 CCHCR1Q8TD31 782 aa7.46□□□□□ -1.22
SPTA1-201ENST00000368147 RUNDC3BQ96NL0 473 aa7.46□□□□□ -1.22
SPTA1-201ENST00000368147 NUP85Q9BW27 656 aa7.46□□□□□ -1.22
SPTA1-201ENST00000368147 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.46□□□□□ -1.22
SPTA1-201ENST00000368147 MYL4P12829 197 aa7.46□□□□□ -1.22
SPTA1-201ENST00000368147 TMEM132DQ14C87 1099 aa7.46□□□□□ -1.22
SPTA1-201ENST00000368147 MAN2A1Q16706 1144 aa7.46□□□□□ -1.22
SPTA1-201ENST00000368147 FBXW10Q5XX13 1052 aa7.46□□□□□ -1.22
SPTA1-201ENST00000368147 PPP1R18Q6NYC8 613 aa7.46□□□□□ -1.22
SPTA1-201ENST00000368147 CCDC33Q8N5R6 958 aa7.46□□□□□ -1.22
SPTA1-201ENST00000368147 AGBL1Q96MI9 1066 aa7.46□□□□□ -1.22
SPTA1-201ENST00000368147 OLFM1Q99784 485 aa7.46□□□□□ -1.22
SPTA1-201ENST00000368147 PITPNM2Q9BZ72 1349 aa7.46□□□□□ -1.22
SPTA1-201ENST00000368147 TJP3O95049 919 aa7.45□□□□□ -1.22
SPTA1-201ENST00000368147 TDP2O95551 362 aa7.45□□□□□ -1.22
SPTA1-201ENST00000368147 HAUS6Q7Z4H7 955 aa7.45□□□□□ -1.22
SPTA1-201ENST00000368147 NDEL1Q9GZM8 345 aa7.45□□□□□ -1.22
SPTA1-201ENST00000368147 TUFT1Q9NNX1 390 aa7.45□□□□□ -1.22
SPTA1-201ENST00000368147 FAM49BQ9NUQ9 324 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms