RNA–Protein interactions for RNA: ENST00000367818.3

XCL1-201, Transcript of X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XCL1, Length 1,367 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XCL1-201ENST00000367818 USP30Q70CQ3 517 aa4.99□□□□□ -1.61
XCL1-201ENST00000367818 PNMA8AQ86V59 439 aaPredicted RBP4.99□□□□□ -1.61
XCL1-201ENST00000367818 VRK3Q8IV63 474 aa4.99□□□□□ -1.61
XCL1-201ENST00000367818 PPIL6Q8IXY8 311 aa4.99□□□□□ -1.61
XCL1-201ENST00000367818 SUPT20HQ8NEM7 779 aa4.99□□□□□ -1.61
XCL1-201ENST00000367818 PIP4K2CQ8TBX8 421 aa4.99□□□□□ -1.61
XCL1-201ENST00000367818 TMEM176AQ96HP8 235 aa4.99□□□□□ -1.61
XCL1-201ENST00000367818 MXD3Q9BW11 206 aa4.99□□□□□ -1.61
XCL1-201ENST00000367818 IFT57Q9NWB7 429 aa4.99□□□□□ -1.61
XCL1-201ENST00000367818 BABAM1Q9NWV8 329 aa4.99□□□□□ -1.61
XCL1-201ENST00000367818 CNOT7Q9UIV1 285 aaKnown RBP4.99□□□□□ -1.61
XCL1-201ENST00000367818 ASTN2O75129 1339 aaPredicted RBP4.99□□□□□ -1.61
XCL1-201ENST00000367818 CNTNAP1P78357 1384 aa4.99□□□□□ -1.61
XCL1-201ENST00000367818 DDX60Q8IY21 1712 aaKnown RBP4.98□□□□□ -1.61
XCL1-201ENST00000367818 SPEF2Q9C093 1822 aa4.98□□□□□ -1.61
XCL1-201ENST00000367818 PI4KAP2A4QPH2 592 aa4.98□□□□□ -1.61
XCL1-201ENST00000367818 ADM5C9JUS6 153 aa4.98□□□□□ -1.61
XCL1-201ENST00000367818 H7C1D1 291 aa4.98□□□□□ -1.61
XCL1-201ENST00000367818 ECE2O60344 883 aa4.98□□□□□ -1.61
XCL1-201ENST00000367818 UFL1O94874 794 aa4.98□□□□□ -1.61
XCL1-201ENST00000367818 CT47B1P0C2W7 299 aaPredicted RBP4.98□□□□□ -1.61
XCL1-201ENST00000367818 ZNF853P0CG23 659 aa4.98□□□□□ -1.61
XCL1-201ENST00000367818 ZSCAN20P17040 1043 aaPredicted RBP4.98□□□□□ -1.61
XCL1-201ENST00000367818 CDK11BP21127 795 aaKnown RBP4.98□□□□□ -1.61
XCL1-201ENST00000367818 RBM25P49756 843 aaKnown RBP4.98□□□□□ -1.61
XCL1-201ENST00000367818 RPS8P62241 208 aaKnown RBP4.98□□□□□ -1.61
XCL1-201ENST00000367818 HMGN5P82970 282 aaKnown RBP4.98□□□□□ -1.61
XCL1-201ENST00000367818 TOB2Q14106 344 aaPredicted RBP4.98□□□□□ -1.61
XCL1-201ENST00000367818 TNIP1Q15025 636 aa4.98□□□□□ -1.61
XCL1-201ENST00000367818 CCDC30Q5VVM6 783 aa4.98□□□□□ -1.61
XCL1-201ENST00000367818 ZNF662Q6ZS27 426 aa4.98□□□□□ -1.61
XCL1-201ENST00000367818 PI4KAP1Q8N8J0 262 aa4.98□□□□□ -1.61
XCL1-201ENST00000367818 KREMEN2Q8NCW0 462 aa4.98□□□□□ -1.61
XCL1-201ENST00000367818 TBC1D16Q8TBP0 767 aa4.98□□□□□ -1.61
XCL1-201ENST00000367818 BTN2A2Q8WVV5 523 aa4.98□□□□□ -1.61
XCL1-201ENST00000367818 CAPNS2Q96L46 248 aa4.98□□□□□ -1.61
XCL1-201ENST00000367818 APBA2Q99767 749 aa4.98□□□□□ -1.61
XCL1-201ENST00000367818 ZDHHC5Q9C0B5 715 aa4.98□□□□□ -1.61
XCL1-201ENST00000367818 CHMP4BQ9H444 224 aaKnown RBP4.98□□□□□ -1.61
XCL1-201ENST00000367818 CWC25Q9NXE8 425 aaPredicted RBP4.98□□□□□ -1.61
XCL1-201ENST00000367818 RIC1Q4ADV7 1423 aa4.98□□□□□ -1.61
XCL1-201ENST00000367818 SNED1Q8TER0 1413 aa4.98□□□□□ -1.61
XCL1-201ENST00000367818 GRID2IPA4D2P6 1211 aa4.97□□□□□ -1.61
XCL1-201ENST00000367818 SNAP23O00161 211 aa4.97□□□□□ -1.61
XCL1-201ENST00000367818 PDE8AO60658 829 aa4.97□□□□□ -1.61
XCL1-201ENST00000367818 DDX58O95786 925 aaKnown RBP4.97□□□□□ -1.61
XCL1-201ENST00000367818 SCG5P05408 212 aa4.97□□□□□ -1.61
XCL1-201ENST00000367818 IGKV5-2P06315 115 aa4.97□□□□□ -1.61
XCL1-201ENST00000367818 ITGAVP06756 1048 aa4.97□□□□□ -1.61
XCL1-201ENST00000367818 SNRPB2P08579 225 aaKnown RBP4.97□□□□□ -1.61
XCL1-201ENST00000367818 ECI1P42126 302 aa4.97□□□□□ -1.61
XCL1-201ENST00000367818 ZNF143P52747 638 aaPredicted RBP4.97□□□□□ -1.61
XCL1-201ENST00000367818 EXOSC9Q06265 439 aaKnown RBP4.97□□□□□ -1.61
XCL1-201ENST00000367818 SF3B3Q15393 1217 aaKnown RBP4.97□□□□□ -1.61
XCL1-201ENST00000367818 TWISTNBQ3B726 338 aaPredicted RBP4.97□□□□□ -1.61
XCL1-201ENST00000367818 DNAJC14Q6Y2X3 702 aaPredicted RBP4.97□□□□□ -1.61
XCL1-201ENST00000367818 USP50Q70EL3 339 aaPredicted RBP4.97□□□□□ -1.61
XCL1-201ENST00000367818 UBE3BQ7Z3V4 1068 aa4.97□□□□□ -1.61
XCL1-201ENST00000367818 GAS2L3Q86XJ1 694 aa4.97□□□□□ -1.61
XCL1-201ENST00000367818 SMC5Q8IY18 1101 aa4.97□□□□□ -1.61
XCL1-201ENST00000367818 ANKRD35Q8N283 1001 aa4.97□□□□□ -1.61
XCL1-201ENST00000367818 ZBTB38Q8NAP3 1195 aaPredicted RBP4.97□□□□□ -1.61
XCL1-201ENST00000367818 SNX21Q969T3 373 aa4.97□□□□□ -1.61
XCL1-201ENST00000367818 PPP1R14AQ96A00 147 aa4.97□□□□□ -1.61
XCL1-201ENST00000367818 LENG9Q96B70 501 aa4.97□□□□□ -1.61
XCL1-201ENST00000367818 STK31Q9BXU1 1019 aa4.97□□□□□ -1.61
XCL1-201ENST00000367818 RTFDC1Q9BY42 306 aaPredicted RBP4.97□□□□□ -1.61
XCL1-201ENST00000367818 C22orf23Q9BZE7 217 aa4.97□□□□□ -1.61
XCL1-201ENST00000367818 ZKSCAN5Q9Y2L8 839 aa4.97□□□□□ -1.61
XCL1-201ENST00000367818 COX11Q9Y6N1 276 aa4.97□□□□□ -1.61
XCL1-201ENST00000367818 TRPM7Q96QT4 1865 aa4.96□□□□□ -1.62
XCL1-201ENST00000367818 RTL9Q8NET4 1388 aa4.96□□□□□ -1.62
XCL1-201ENST00000367818 IGHDP01880 384 aa4.96□□□□□ -1.62
XCL1-201ENST00000367818 LTFP02788 710 aa4.96□□□□□ -1.62
XCL1-201ENST00000367818 PCCAP05165 728 aaPredicted RBP4.96□□□□□ -1.62
XCL1-201ENST00000367818 HOXB7P09629 217 aa4.96□□□□□ -1.62
XCL1-201ENST00000367818 KLRK1P26718 216 aa4.96□□□□□ -1.62
XCL1-201ENST00000367818 CTCFP49711 727 aaPredicted RBP4.96□□□□□ -1.62
XCL1-201ENST00000367818 SCNN1GP51170 649 aa4.96□□□□□ -1.62
XCL1-201ENST00000367818 SLFN5Q08AF3 891 aa4.96□□□□□ -1.62
XCL1-201ENST00000367818 PRKG1Q13976 671 aa4.96□□□□□ -1.62
XCL1-201ENST00000367818 KLHL40Q2TBA0 621 aa4.96□□□□□ -1.62
XCL1-201ENST00000367818 WDR72Q3MJ13 1102 aa4.96□□□□□ -1.62
XCL1-201ENST00000367818 CCDC152Q4G0S7 254 aa4.96□□□□□ -1.62
XCL1-201ENST00000367818 KSR2Q6VAB6 950 aa4.96□□□□□ -1.62
XCL1-201ENST00000367818 Q6ZRM9 215 aa4.96□□□□□ -1.62
XCL1-201ENST00000367818 LARP4Q71RC2 724 aaKnown RBP eCLIP4.96□□□□□ -1.62
XCL1-201ENST00000367818 RHOUQ7L0Q8 258 aa4.96□□□□□ -1.62
XCL1-201ENST00000367818 KRT26Q7Z3Y9 468 aa4.96□□□□□ -1.62
XCL1-201ENST00000367818 ANKRD18AQ8IVF6 992 aa4.96□□□□□ -1.62
XCL1-201ENST00000367818 RBM12BQ8IXT5 1001 aaKnown RBP4.96□□□□□ -1.62
XCL1-201ENST00000367818 SHCBP1Q8NEM2 672 aa4.96□□□□□ -1.62
XCL1-201ENST00000367818 MYRIPQ8NFW9 859 aa4.96□□□□□ -1.62
XCL1-201ENST00000367818 SLC25A43Q8WUT9 341 aaPredicted RBP4.96□□□□□ -1.62
XCL1-201ENST00000367818 TNPO1Q92973 898 aaKnown RBP4.96□□□□□ -1.62
XCL1-201ENST00000367818 DCPSQ96C86 337 aaKnown RBP4.96□□□□□ -1.62
XCL1-201ENST00000367818 EYA3Q99504 573 aa4.96□□□□□ -1.62
XCL1-201ENST00000367818 LGR4Q9BXB1 951 aa4.96□□□□□ -1.62
XCL1-201ENST00000367818 KRTAP1-5Q9BYS1 174 aa4.96□□□□□ -1.62
XCL1-201ENST00000367818 CDIP1Q9H305 208 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms