RNA–Protein interactions for RNA: ENST00000364047.1

RNU6-553P-201, Transcript of RNA, U6 small nuclear 553, pseudogene, humanhuman

BASIC

Gene RNU6-553P, Length 96 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-553P-201ENST00000364047 MRI1Q9BV20 369 aa5.52□□□□□ -1.53
RNU6-553P-201ENST00000364047 MLST8Q9BVC4 326 aa5.52□□□□□ -1.53
RNU6-553P-201ENST00000364047 TMEM140Q9NV12 185 aa5.52□□□□□ -1.53
RNU6-553P-201ENST00000364047 AJAP1Q9UKB5 411 aaPredicted RBP5.52□□□□□ -1.53
RNU6-553P-201ENST00000364047 SIK3Q9Y2K2 1263 aa5.52□□□□□ -1.53
RNU6-553P-201ENST00000364047 ZNF185O15231 689 aa5.51□□□□□ -1.53
RNU6-553P-201ENST00000364047 KATNA1O75449 491 aa5.51□□□□□ -1.53
RNU6-553P-201ENST00000364047 NCR1O76036 304 aa5.51□□□□□ -1.53
RNU6-553P-201ENST00000364047 ATP5JP18859 108 aa5.51□□□□□ -1.53
RNU6-553P-201ENST00000364047 FPR1P21462 350 aa5.51□□□□□ -1.53
RNU6-553P-201ENST00000364047 ZFP36P26651 326 aaKnown RBP5.51□□□□□ -1.53
RNU6-553P-201ENST00000364047 SLC6A9P48067 706 aa5.51□□□□□ -1.53
RNU6-553P-201ENST00000364047 DPTQ07507 201 aa5.51□□□□□ -1.53
RNU6-553P-201ENST00000364047 PDCD4Q53EL6 469 aaKnown RBP5.51□□□□□ -1.53
RNU6-553P-201ENST00000364047 LY6G5CQ5SRR4 150 aa5.51□□□□□ -1.53
RNU6-553P-201ENST00000364047 PLXDC1Q8IUK5 500 aa5.51□□□□□ -1.53
RNU6-553P-201ENST00000364047 DRC7Q8IY82 874 aa5.51□□□□□ -1.53
RNU6-553P-201ENST00000364047 OR2I1PQ8NGU4 316 aa5.51□□□□□ -1.53
RNU6-553P-201ENST00000364047 CCHCR1Q8TD31 782 aa5.51□□□□□ -1.53
RNU6-553P-201ENST00000364047 NRG4Q8WWG1 115 aa5.51□□□□□ -1.53
RNU6-553P-201ENST00000364047 JADE3Q92613 823 aa5.51□□□□□ -1.53
RNU6-553P-201ENST00000364047 DPF2Q92785 391 aa5.51□□□□□ -1.53
RNU6-553P-201ENST00000364047 FAXDC2Q96IV6 333 aa5.51□□□□□ -1.53
RNU6-553P-201ENST00000364047 C7orf25Q9BPX7 421 aa5.51□□□□□ -1.53
RNU6-553P-201ENST00000364047 TEX101Q9BY14 249 aa5.51□□□□□ -1.53
RNU6-553P-201ENST00000364047 CCDC8Q9H0W5 538 aaPredicted RBP5.51□□□□□ -1.53
RNU6-553P-201ENST00000364047 AKIP1Q9NQ31 210 aa5.51□□□□□ -1.53
RNU6-553P-201ENST00000364047 INTUQ9ULD6 942 aa5.51□□□□□ -1.53
RNU6-553P-201ENST00000364047 USP15Q9Y4E8 981 aaPredicted RBP5.51□□□□□ -1.53
RNU6-553P-201ENST00000364047 COL4A3BPQ9Y5P4 624 aa5.51□□□□□ -1.53
RNU6-553P-201ENST00000364047 PNPLA7Q6ZV29 1317 aa5.5□□□□□ -1.53
RNU6-553P-201ENST00000364047 WDR33Q9C0J8 1336 aaKnown RBP5.5□□□□□ -1.53
RNU6-553P-201ENST00000364047 GAGE12BA1L429 117 aa5.5□□□□□ -1.53
RNU6-553P-201ENST00000364047 GAGE12HA6NDE8 117 aa5.5□□□□□ -1.53
RNU6-553P-201ENST00000364047 DRGXA6NNA5 263 aa5.5□□□□□ -1.53
RNU6-553P-201ENST00000364047 XPOTO43592 962 aaKnown RBP5.5□□□□□ -1.53
RNU6-553P-201ENST00000364047 GPR32O75388 356 aa5.5□□□□□ -1.53
RNU6-553P-201ENST00000364047 NDUFA10O95299 355 aa5.5□□□□□ -1.53
RNU6-553P-201ENST00000364047 SPATA31D3P0C874 917 aa5.5□□□□□ -1.53
RNU6-553P-201ENST00000364047 EVA1CP58658 441 aa5.5□□□□□ -1.53
RNU6-553P-201ENST00000364047 FAM102AQ5T9C2 384 aaPredicted RBP5.5□□□□□ -1.53
RNU6-553P-201ENST00000364047 SPATA31D4Q6ZUB0 917 aa5.5□□□□□ -1.53
RNU6-553P-201ENST00000364047 LDLRAD3Q86YD5 345 aa5.5□□□□□ -1.53
RNU6-553P-201ENST00000364047 ULK2Q8IYT8 1036 aa5.5□□□□□ -1.53
RNU6-553P-201ENST00000364047 CASKIN2Q8WXE0 1202 aa5.5□□□□□ -1.53
RNU6-553P-201ENST00000364047 CHFRQ96EP1 664 aa5.5□□□□□ -1.53
RNU6-553P-201ENST00000364047 CYFIP2Q96F07 1278 aa5.5□□□□□ -1.53
RNU6-553P-201ENST00000364047 MANSC1Q9H8J5 431 aa5.5□□□□□ -1.53
RNU6-553P-201ENST00000364047 SAP30BPQ9UHR5 308 aaKnown RBP5.5□□□□□ -1.53
RNU6-553P-201ENST00000364047 ACTL7AQ9Y615 435 aa5.5□□□□□ -1.53
RNU6-553P-201ENST00000364047 SHTN1A0MZ66 631 aa5.49□□□□□ -1.53
RNU6-553P-201ENST00000364047 KLHL33A6NCF5 533 aa5.49□□□□□ -1.53
RNU6-553P-201ENST00000364047 ALG1L2C9J202 215 aa5.49□□□□□ -1.53
RNU6-553P-201ENST00000364047 GABRDO14764 452 aa5.49□□□□□ -1.53
RNU6-553P-201ENST00000364047 TEX33O43247 280 aa5.49□□□□□ -1.53
RNU6-553P-201ENST00000364047 NDUFS2O75306 463 aa5.49□□□□□ -1.53
RNU6-553P-201ENST00000364047 PCSK1P29120 753 aa5.49□□□□□ -1.53
RNU6-553P-201ENST00000364047 INHBCP55103 352 aa5.49□□□□□ -1.53
RNU6-553P-201ENST00000364047 PTPAQ15257 358 aa5.49□□□□□ -1.53
RNU6-553P-201ENST00000364047 METRNLQ641Q3 311 aa5.49□□□□□ -1.53
RNU6-553P-201ENST00000364047 OTUD7BQ6GQQ9 843 aa5.49□□□□□ -1.53
RNU6-553P-201ENST00000364047 ZNF529Q6P280 563 aa5.49□□□□□ -1.53
RNU6-553P-201ENST00000364047 MED25Q71SY5 747 aa5.49□□□□□ -1.53
RNU6-553P-201ENST00000364047 RHOT1Q8IXI2 618 aa5.49□□□□□ -1.53
RNU6-553P-201ENST00000364047 RPUSD2Q8IZ73 545 aaKnown RBP5.49□□□□□ -1.53
RNU6-553P-201ENST00000364047 MYEOVQ96EZ4 313 aa5.49□□□□□ -1.53
RNU6-553P-201ENST00000364047 NEU1Q99519 415 aa5.49□□□□□ -1.53
RNU6-553P-201ENST00000364047 PRRX2Q99811 253 aa5.49□□□□□ -1.53
RNU6-553P-201ENST00000364047 PCDH12Q9NPG4 1184 aa5.49□□□□□ -1.53
RNU6-553P-201ENST00000364047 TUBD1Q9UJT1 453 aa5.49□□□□□ -1.53
RNU6-553P-201ENST00000364047 RUVBL1Q9Y265 456 aaKnown RBP5.49□□□□□ -1.53
RNU6-553P-201ENST00000364047 MRFAP1Q9Y605 127 aa5.49□□□□□ -1.53
RNU6-553P-201ENST00000364047 HS3ST4Q9Y661 456 aa5.49□□□□□ -1.53
RNU6-553P-201ENST00000364047 CENPVL1A0A0U1RR11 272 aa5.48□□□□□ -1.53
RNU6-553P-201ENST00000364047 TMEM191CA6NGB0 347 aa5.48□□□□□ -1.53
RNU6-553P-201ENST00000364047 PCDHGA12O60330 932 aa5.48□□□□□ -1.53
RNU6-553P-201ENST00000364047 LPXNO60711 386 aa5.48□□□□□ -1.53
RNU6-553P-201ENST00000364047 POMCP01189 267 aa5.48□□□□□ -1.53
RNU6-553P-201ENST00000364047 AMY1AP04745 511 aa5.48□□□□□ -1.53
RNU6-553P-201ENST00000364047 DDCP20711 480 aa5.48□□□□□ -1.53
RNU6-553P-201ENST00000364047 C5AR1P21730 350 aa5.48□□□□□ -1.53
RNU6-553P-201ENST00000364047 WASP42768 502 aa5.48□□□□□ -1.53
RNU6-553P-201ENST00000364047 SLC16A1P53985 500 aa5.48□□□□□ -1.53
RNU6-553P-201ENST00000364047 MTM1Q13496 603 aa5.48□□□□□ -1.53
RNU6-553P-201ENST00000364047 BEAN1Q3B7T3 259 aa5.48□□□□□ -1.53
RNU6-553P-201ENST00000364047 AGAP9Q5VTM2 703 aa5.48□□□□□ -1.53
RNU6-553P-201ENST00000364047 Q6ZPA2 131 aa5.48□□□□□ -1.53
RNU6-553P-201ENST00000364047 MIGA2Q7L4E1 593 aa5.48□□□□□ -1.53
RNU6-553P-201ENST00000364047 MRGPRGQ86SM5 289 aa5.48□□□□□ -1.53
RNU6-553P-201ENST00000364047 VRK3Q8IV63 474 aa5.48□□□□□ -1.53
RNU6-553P-201ENST00000364047 RHOT2Q8IXI1 618 aa5.48□□□□□ -1.53
RNU6-553P-201ENST00000364047 ZGPATQ8N5A5 531 aaKnown RBP5.48□□□□□ -1.53
RNU6-553P-201ENST00000364047 OR56A1Q8NGH5 318 aa5.48□□□□□ -1.53
RNU6-553P-201ENST00000364047 FUBP3Q96I24 572 aaKnown RBP eCLIP5.48□□□□□ -1.53
RNU6-553P-201ENST00000364047 TTPALQ9BTX7 342 aa5.48□□□□□ -1.53
RNU6-553P-201ENST00000364047 REXO4Q9GZR2 422 aaKnown RBP5.48□□□□□ -1.53
RNU6-553P-201ENST00000364047 IKZF4Q9H2S9 585 aa5.48□□□□□ -1.53
RNU6-553P-201ENST00000364047 SLC23A1Q9UHI7 598 aa5.48□□□□□ -1.53
RNU6-553P-201ENST00000364047 PCDHGA9Q9Y5G4 932 aaKnown RBP5.48□□□□□ -1.53
RNU6-553P-201ENST00000364047 PCDHGA8Q9Y5G5 932 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms