RNA–Protein interactions for RNA: ENST00000363313.1

RNU6-238P-201, Transcript of RNA, U6 small nuclear 238, pseudogene, humanhuman

BASIC

Gene RNU6-238P, Length 106 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-238P-201ENST00000363313 NBPF8Q3BBV2 869 aa3.36□□□□□ -1.87
RNU6-238P-201ENST00000363313 KLHL22Q53GT1 634 aa3.36□□□□□ -1.87
RNU6-238P-201ENST00000363313 C2orf27AQ580R0 203 aa3.36□□□□□ -1.87
RNU6-238P-201ENST00000363313 RRP12Q5JTH9 1297 aaKnown RBP3.36□□□□□ -1.87
RNU6-238P-201ENST00000363313 TSHZ3Q63HK5 1081 aa3.36□□□□□ -1.87
RNU6-238P-201ENST00000363313 CDCA2Q69YH5 1023 aaPredicted RBP3.36□□□□□ -1.87
RNU6-238P-201ENST00000363313 OR14C36Q8NHC7 312 aa3.36□□□□□ -1.87
RNU6-238P-201ENST00000363313 FUBP3Q96I24 572 aaKnown RBP eCLIP3.36□□□□□ -1.87
RNU6-238P-201ENST00000363313 ZNF496Q96IT1 587 aaPredicted RBP3.36□□□□□ -1.87
RNU6-238P-201ENST00000363313 DNAJC7Q99615 494 aa3.36□□□□□ -1.87
RNU6-238P-201ENST00000363313 PPP1R1BQ9UD71 204 aaPredicted RBP3.36□□□□□ -1.87
RNU6-238P-201ENST00000363313 PRSS50Q9UI38 385 aa3.36□□□□□ -1.87
RNU6-238P-201ENST00000363313 MPPED1O15442 326 aa3.35□□□□□ -1.87
RNU6-238P-201ENST00000363313 PEX1O43933 1283 aa3.35□□□□□ -1.87
RNU6-238P-201ENST00000363313 DNAJC8O75937 253 aaPredicted RBP3.35□□□□□ -1.87
RNU6-238P-201ENST00000363313 F2P00734 622 aa3.35□□□□□ -1.87
RNU6-238P-201ENST00000363313 IGKV2-30P06310 120 aa3.35□□□□□ -1.87
RNU6-238P-201ENST00000363313 GCSHP23434 173 aa3.35□□□□□ -1.87
RNU6-238P-201ENST00000363313 VAV2P52735 878 aa3.35□□□□□ -1.87
RNU6-238P-201ENST00000363313 RBL2Q08999 1139 aa3.35□□□□□ -1.87
RNU6-238P-201ENST00000363313 EIF2B5Q13144 721 aaKnown RBP3.35□□□□□ -1.87
RNU6-238P-201ENST00000363313 CFAP100Q494V2 611 aa3.35□□□□□ -1.87
RNU6-238P-201ENST00000363313 ZBTB41Q5SVQ8 909 aa3.35□□□□□ -1.87
RNU6-238P-201ENST00000363313 SOGA3Q5TF21 947 aa3.35□□□□□ -1.87
RNU6-238P-201ENST00000363313 FOXR2Q6PJQ5 311 aa3.35□□□□□ -1.87
RNU6-238P-201ENST00000363313 ZNF517Q6ZMY9 492 aaPredicted RBP3.35□□□□□ -1.87
RNU6-238P-201ENST00000363313 SLC41A1Q8IVJ1 513 aa3.35□□□□□ -1.87
RNU6-238P-201ENST00000363313 ZNF610Q8N9Z0 462 aa3.35□□□□□ -1.87
RNU6-238P-201ENST00000363313 RNF169Q8NCN4 708 aa3.35□□□□□ -1.87
RNU6-238P-201ENST00000363313 DPF1Q92782 380 aa3.35□□□□□ -1.87
RNU6-238P-201ENST00000363313 ZBTB9Q96C00 473 aa3.35□□□□□ -1.87
RNU6-238P-201ENST00000363313 PTCD3Q96EY7 689 aaKnown RBP3.35□□□□□ -1.87
RNU6-238P-201ENST00000363313 CEP95Q96GE4 821 aa3.35□□□□□ -1.87
RNU6-238P-201ENST00000363313 SNTG2Q9NY99 539 aa3.35□□□□□ -1.87
RNU6-238P-201ENST00000363313 MSRAQ9UJ68 235 aa3.35□□□□□ -1.87
RNU6-238P-201ENST00000363313 TMPRSS11EQ9UL52 423 aa3.35□□□□□ -1.87
RNU6-238P-201ENST00000363313 FAM221BA6H8Z2 402 aa3.34□□□□□ -1.87
RNU6-238P-201ENST00000363313 GAS7O60861 476 aa3.34□□□□□ -1.87
RNU6-238P-201ENST00000363313 RFPL3O75679 317 aa3.34□□□□□ -1.87
RNU6-238P-201ENST00000363313 ATP2A2P16615 1042 aaKnown RBP3.34□□□□□ -1.87
RNU6-238P-201ENST00000363313 ATP2B1P20020 1258 aa3.34□□□□□ -1.87
RNU6-238P-201ENST00000363313 CTSSP25774 331 aa3.34□□□□□ -1.87
RNU6-238P-201ENST00000363313 CCKBRP32239 447 aa3.34□□□□□ -1.87
RNU6-238P-201ENST00000363313 FOXG1P55316 489 aaPredicted RBP3.34□□□□□ -1.87
RNU6-238P-201ENST00000363313 SLC10A2Q12908 348 aaPredicted RBP3.34□□□□□ -1.87
RNU6-238P-201ENST00000363313 SP140Q13342 867 aa3.34□□□□□ -1.87
RNU6-238P-201ENST00000363313 LLGL1Q15334 1064 aa3.34□□□□□ -1.87
RNU6-238P-201ENST00000363313 CYP2A13Q16696 494 aa3.34□□□□□ -1.87
RNU6-238P-201ENST00000363313 MFSD14BQ5SR56 506 aa3.34□□□□□ -1.87
RNU6-238P-201ENST00000363313 ZNF572Q7Z3I7 529 aaPredicted RBP3.34□□□□□ -1.87
RNU6-238P-201ENST00000363313 MDM1Q8TC05 714 aa3.34□□□□□ -1.87
RNU6-238P-201ENST00000363313 ZNF480Q8WV37 535 aa3.34□□□□□ -1.87
RNU6-238P-201ENST00000363313 RNF31Q96EP0 1072 aa3.34□□□□□ -1.87
RNU6-238P-201ENST00000363313 MED15Q96RN5 788 aa3.34□□□□□ -1.87
RNU6-238P-201ENST00000363313 UNKLQ9H9P5 680 aaKnown RBP3.34□□□□□ -1.87
RNU6-238P-201ENST00000363313 ASB6Q9NWX5 421 aa3.34□□□□□ -1.87
RNU6-238P-201ENST00000363313 EVLQ9UI08 416 aaPredicted RBP3.34□□□□□ -1.87
RNU6-238P-201ENST00000363313 RPTORQ8N122 1335 aa3.34□□□□□ -1.87
RNU6-238P-201ENST00000363313 PRSS38A1L453 326 aa3.33□□□□□ -1.88
RNU6-238P-201ENST00000363313 CXorf49A8MYA2 514 aaPredicted RBP3.33□□□□□ -1.88
RNU6-238P-201ENST00000363313 PRAMEF4O60810 478 aa3.33□□□□□ -1.88
RNU6-238P-201ENST00000363313 TMEM127O75204 238 aa3.33□□□□□ -1.88
RNU6-238P-201ENST00000363313 MOSPD3O75425 235 aa3.33□□□□□ -1.88
RNU6-238P-201ENST00000363313 RAPGEF3O95398 923 aa3.33□□□□□ -1.88
RNU6-238P-201ENST00000363313 GPANK1O95872 356 aa3.33□□□□□ -1.88
RNU6-238P-201ENST00000363313 SRGNP10124 158 aa3.33□□□□□ -1.88
RNU6-238P-201ENST00000363313 LSP1P33241 339 aa3.33□□□□□ -1.88
RNU6-238P-201ENST00000363313 TUBA4AP68366 448 aa3.33□□□□□ -1.88
RNU6-238P-201ENST00000363313 OCRLQ01968 901 aa3.33□□□□□ -1.88
RNU6-238P-201ENST00000363313 PPARAQ07869 468 aa3.33□□□□□ -1.88
RNU6-238P-201ENST00000363313 PRAMEF14Q5SWL7 426 aa3.33□□□□□ -1.88
RNU6-238P-201ENST00000363313 FCRLBQ6BAA4 426 aa3.33□□□□□ -1.88
RNU6-238P-201ENST00000363313 ABHD15Q6UXT9 468 aa3.33□□□□□ -1.88
RNU6-238P-201ENST00000363313 FRMD7Q6ZUT3 714 aa3.33□□□□□ -1.88
RNU6-238P-201ENST00000363313 MED25Q71SY5 747 aa3.33□□□□□ -1.88
RNU6-238P-201ENST00000363313 LYSMD2Q8IV50 215 aa3.33□□□□□ -1.88
RNU6-238P-201ENST00000363313 SEMA6DQ8NFY4 1073 aa3.33□□□□□ -1.88
RNU6-238P-201ENST00000363313 NACC2Q96BF6 587 aa3.33□□□□□ -1.88
RNU6-238P-201ENST00000363313 CLUHP3Q96NS8 147 aa3.33□□□□□ -1.88
RNU6-238P-201ENST00000363313 PTCH2Q9Y6C5 1203 aa3.33□□□□□ -1.88
RNU6-238P-201ENST00000363313 PROM1O43490 865 aa3.32□□□□□ -1.88
RNU6-238P-201ENST00000363313 JMJD7P0C870 316 aa3.32□□□□□ -1.88
RNU6-238P-201ENST00000363313 FGFR4P22455 802 aa3.32□□□□□ -1.88
RNU6-238P-201ENST00000363313 ITPKBP27987 946 aa3.32□□□□□ -1.88
RNU6-238P-201ENST00000363313 GRIA3P42263 894 aa3.32□□□□□ -1.88
RNU6-238P-201ENST00000363313 SLC35B2Q8TB61 432 aa3.32□□□□□ -1.88
RNU6-238P-201ENST00000363313 RPL36ALQ969Q0 106 aaKnown RBP3.32□□□□□ -1.88
RNU6-238P-201ENST00000363313 BCO1Q9HAY6 547 aa3.32□□□□□ -1.88
RNU6-238P-201ENST00000363313 MAGEC2Q9UBF1 373 aaPredicted RBP3.32□□□□□ -1.88
RNU6-238P-201ENST00000363313 BTBD3Q9Y2F9 522 aa3.32□□□□□ -1.88
RNU6-238P-201ENST00000363313 WNT6Q9Y6F9 365 aa3.32□□□□□ -1.88
RNU6-238P-201ENST00000363313 AOX1Q06278 1338 aa3.32□□□□□ -1.88
RNU6-238P-201ENST00000363313 PNPLA7Q6ZV29 1317 aa3.32□□□□□ -1.88
RNU6-238P-201ENST00000363313 ATRNL1Q5VV63 1379 aa3.31□□□□□ -1.88
RNU6-238P-201ENST00000363313 GCOM1H8Y6P7 765 aaPredicted RBP3.31□□□□□ -1.88
RNU6-238P-201ENST00000363313 TGM5O43548 720 aa3.31□□□□□ -1.88
RNU6-238P-201ENST00000363313 POMCP01189 267 aa3.31□□□□□ -1.88
RNU6-238P-201ENST00000363313 IL2RBP14784 551 aa3.31□□□□□ -1.88
RNU6-238P-201ENST00000363313 ALOX15P16050 662 aaPredicted RBP3.31□□□□□ -1.88
RNU6-238P-201ENST00000363313 POU3F2P20265 443 aaPredicted RBP3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms