RNA–Protein interactions for RNA: ENST00000362588.1

RNU4-35P-201, Transcript of RNA, U4 small nuclear 35, pseudogene, humanhuman

BASIC

Gene RNU4-35P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-35P-201ENST00000362588 SMAD4Q13485 552 aaKnown RBP3.81□□□□□ -1.8
RNU4-35P-201ENST00000362588 KCNC3Q14003 757 aa3.81□□□□□ -1.8
RNU4-35P-201ENST00000362588 HSP90AA2PQ14568 343 aaPredicted RBP3.81□□□□□ -1.8
RNU4-35P-201ENST00000362588 SMC1AQ14683 1233 aaKnown RBP3.81□□□□□ -1.8
RNU4-35P-201ENST00000362588 NOLC1Q14978 699 aaKnown RBP eCLIP3.81□□□□□ -1.8
RNU4-35P-201ENST00000362588 PCBP1Q15365 356 aaKnown RBP eCLIP3.81□□□□□ -1.8
RNU4-35P-201ENST00000362588 E2F4Q16254 413 aa3.81□□□□□ -1.8
RNU4-35P-201ENST00000362588 DUSP6Q16828 381 aa3.81□□□□□ -1.8
RNU4-35P-201ENST00000362588 CSPP1Q1MSJ5 1256 aa3.81□□□□□ -1.8
RNU4-35P-201ENST00000362588 DCAF4L1Q3SXM0 396 aa3.81□□□□□ -1.8
RNU4-35P-201ENST00000362588 RTP2Q5QGT7 225 aa3.81□□□□□ -1.8
RNU4-35P-201ENST00000362588 RARS2Q5T160 578 aaKnown RBP3.81□□□□□ -1.8
RNU4-35P-201ENST00000362588 AXDND1Q5T1B0 1012 aaPredicted RBP3.81□□□□□ -1.8
RNU4-35P-201ENST00000362588 SYCE2Q6PIF2 218 aa3.81□□□□□ -1.8
RNU4-35P-201ENST00000362588 MPZL3Q6UWV2 235 aa3.81□□□□□ -1.8
RNU4-35P-201ENST00000362588 CD300LGQ6UXG3 332 aa3.81□□□□□ -1.8
RNU4-35P-201ENST00000362588 SPATA31D4Q6ZUB0 917 aa3.81□□□□□ -1.8
RNU4-35P-201ENST00000362588 DDX53Q86TM3 631 aaKnown RBP3.81□□□□□ -1.8
RNU4-35P-201ENST00000362588 CEP57Q86XR8 500 aa3.81□□□□□ -1.8
RNU4-35P-201ENST00000362588 FAM178BQ8IXR5 827 aa3.81□□□□□ -1.8
RNU4-35P-201ENST00000362588 HACE1Q8IYU2 909 aa3.81□□□□□ -1.8
RNU4-35P-201ENST00000362588 RNF168Q8IYW5 571 aaPredicted RBP3.81□□□□□ -1.8
RNU4-35P-201ENST00000362588 SMRP1Q8NCR6 262 aa3.81□□□□□ -1.8
RNU4-35P-201ENST00000362588 CNNM3Q8NE01 707 aa3.81□□□□□ -1.8
RNU4-35P-201ENST00000362588 ST13P5Q8NFI4 369 aaPredicted RBP3.81□□□□□ -1.8
RNU4-35P-201ENST00000362588 NOC3LQ8WTT2 800 aaKnown RBP3.81□□□□□ -1.8
RNU4-35P-201ENST00000362588 SPIRE2Q8WWL2 714 aa3.81□□□□□ -1.8
RNU4-35P-201ENST00000362588 DDX12PQ92771 950 aa3.81□□□□□ -1.8
RNU4-35P-201ENST00000362588 C18orf25Q96B23 403 aaPredicted RBP3.81□□□□□ -1.8
RNU4-35P-201ENST00000362588 FAM212AQ96EL1 285 aa3.81□□□□□ -1.8
RNU4-35P-201ENST00000362588 MSLNLQ96KJ4 702 aa3.81□□□□□ -1.8
RNU4-35P-201ENST00000362588 SNX27Q96L92 541 aa3.81□□□□□ -1.8
RNU4-35P-201ENST00000362588 ZNF396Q96N95 335 aaPredicted RBP3.81□□□□□ -1.8
RNU4-35P-201ENST00000362588 ZMAT2Q96NC0 199 aaKnown RBP3.81□□□□□ -1.8
RNU4-35P-201ENST00000362588 KLHL5Q96PQ7 755 aa3.81□□□□□ -1.8
RNU4-35P-201ENST00000362588 PPP1R10Q96QC0 940 aaKnown RBP3.81□□□□□ -1.8
RNU4-35P-201ENST00000362588 TMEM175Q9BSA9 504 aa3.81□□□□□ -1.8
RNU4-35P-201ENST00000362588 TCHPQ9BT92 498 aa3.81□□□□□ -1.8
RNU4-35P-201ENST00000362588 CCDC94Q9BW85 323 aaPredicted RBP3.81□□□□□ -1.8
RNU4-35P-201ENST00000362588 BLZF1Q9H2G9 400 aa3.81□□□□□ -1.8
RNU4-35P-201ENST00000362588 TMEM134Q9H6X4 195 aa3.81□□□□□ -1.8
RNU4-35P-201ENST00000362588 PARVGQ9HBI0 331 aa3.81□□□□□ -1.8
RNU4-35P-201ENST00000362588 PTPRHQ9HD43 1115 aa3.81□□□□□ -1.8
RNU4-35P-201ENST00000362588 RNF216Q9NWF9 866 aaPredicted RBP3.81□□□□□ -1.8
RNU4-35P-201ENST00000362588 LARSQ9P2J5 1176 aaKnown RBP3.81□□□□□ -1.8
RNU4-35P-201ENST00000362588 STK17AQ9UEE5 414 aa3.81□□□□□ -1.8
RNU4-35P-201ENST00000362588 CCDC39Q9UFE4 941 aa3.81□□□□□ -1.8
RNU4-35P-201ENST00000362588 TUBGCP4Q9UGJ1 667 aa3.81□□□□□ -1.8
RNU4-35P-201ENST00000362588 PUF60Q9UHX1 559 aaKnown RBP3.81□□□□□ -1.8
RNU4-35P-201ENST00000362588 CD207Q9UJ71 328 aa3.81□□□□□ -1.8
RNU4-35P-201ENST00000362588 ODF2LQ9ULJ1 636 aa3.81□□□□□ -1.8
RNU4-35P-201ENST00000362588 TBX20Q9UMR3 447 aa3.81□□□□□ -1.8
RNU4-35P-201ENST00000362588 PCDHA7Q9UN72 937 aa3.81□□□□□ -1.8
RNU4-35P-201ENST00000362588 TNFSF13BQ9Y275 285 aa3.81□□□□□ -1.8
RNU4-35P-201ENST00000362588 GIT1Q9Y2X7 761 aa3.81□□□□□ -1.8
RNU4-35P-201ENST00000362588 USP15Q9Y4E8 981 aaPredicted RBP3.81□□□□□ -1.8
RNU4-35P-201ENST00000362588 HCFC2Q9Y5Z7 792 aa3.81□□□□□ -1.8
RNU4-35P-201ENST00000362588 DENND4CQ5VZ89 1909 aa3.81□□□□□ -1.8
RNU4-35P-201ENST00000362588 KIF26AQ9ULI4 1882 aaPredicted RBP3.81□□□□□ -1.8
RNU4-35P-201ENST00000362588 COL4A3Q01955 1670 aa3.81□□□□□ -1.8
RNU4-35P-201ENST00000362588 PTPRDP23468 1912 aa3.8□□□□□ -1.8
RNU4-35P-201ENST00000362588 ZMYM2Q9UBW7 1377 aa3.8□□□□□ -1.8
RNU4-35P-201ENST00000362588 MUC6Q6W4X9 2439 aa3.8□□□□□ -1.8
RNU4-35P-201ENST00000362588 KMT2EQ8IZD2 1858 aa3.8□□□□□ -1.8
RNU4-35P-201ENST00000362588 SMIM28A0A1B0GU29 152 aa3.8□□□□□ -1.8
RNU4-35P-201ENST00000362588 A0A1B0GVL5 298 aa3.8□□□□□ -1.8
RNU4-35P-201ENST00000362588 GOLGA8IPA6NC78 632 aa3.8□□□□□ -1.8
RNU4-35P-201ENST00000362588 SPDYE4A6NLX3 237 aa3.8□□□□□ -1.8
RNU4-35P-201ENST00000362588 GOLGA8JA6NMD2 632 aa3.8□□□□□ -1.8
RNU4-35P-201ENST00000362588 LACTBL1A8MY62 500 aa3.8□□□□□ -1.8
RNU4-35P-201ENST00000362588 TNFRSF10AO00220 468 aa3.8□□□□□ -1.8
RNU4-35P-201ENST00000362588 PODXLO00592 558 aa3.8□□□□□ -1.8
RNU4-35P-201ENST00000362588 TEX28O15482 410 aa3.8□□□□□ -1.8
RNU4-35P-201ENST00000362588 POLR2DO15514 142 aaKnown RBP3.8□□□□□ -1.8
RNU4-35P-201ENST00000362588 ADAM12O43184 909 aa3.8□□□□□ -1.8
RNU4-35P-201ENST00000362588 SLC26A4O43511 780 aa3.8□□□□□ -1.8
RNU4-35P-201ENST00000362588 FAM189A1O60320 539 aa3.8□□□□□ -1.8
RNU4-35P-201ENST00000362588 CUTAO60888 179 aa3.8□□□□□ -1.8
RNU4-35P-201ENST00000362588 LILRB3O75022 631 aa3.8□□□□□ -1.8
RNU4-35P-201ENST00000362588 PPP6R2O75170 966 aa3.8□□□□□ -1.8
RNU4-35P-201ENST00000362588 TADA2AO75478 443 aa3.8□□□□□ -1.8
RNU4-35P-201ENST00000362588 TOM1L1O75674 476 aa3.8□□□□□ -1.8
RNU4-35P-201ENST00000362588 RFPL2O75678 378 aa3.8□□□□□ -1.8
RNU4-35P-201ENST00000362588 PPP1R37O75864 691 aa3.8□□□□□ -1.8
RNU4-35P-201ENST00000362588 GCNT3O95395 438 aa3.8□□□□□ -1.8
RNU4-35P-201ENST00000362588 EFEMP2O95967 443 aa3.8□□□□□ -1.8
RNU4-35P-201ENST00000362588 ALDH2P05091 517 aa3.8□□□□□ -1.8
RNU4-35P-201ENST00000362588 URODP06132 367 aa3.8□□□□□ -1.8
RNU4-35P-201ENST00000362588 NFICP08651 508 aa3.8□□□□□ -1.8
RNU4-35P-201ENST00000362588 PRR29P0C7W0 189 aa3.8□□□□□ -1.8
RNU4-35P-201ENST00000362588 MCF2P10911 925 aa3.8□□□□□ -1.8
RNU4-35P-201ENST00000362588 PFKFB1P16118 471 aa3.8□□□□□ -1.8
RNU4-35P-201ENST00000362588 KLRC2P26717 231 aa3.8□□□□□ -1.8
RNU4-35P-201ENST00000362588 TKTP29401 623 aaKnown RBP3.8□□□□□ -1.8
RNU4-35P-201ENST00000362588 AFMP43652 599 aa3.8□□□□□ -1.8
RNU4-35P-201ENST00000362588 ME1P48163 572 aa3.8□□□□□ -1.8
RNU4-35P-201ENST00000362588 GLUD2P49448 558 aa3.8□□□□□ -1.8
RNU4-35P-201ENST00000362588 ACOT2P49753 483 aa3.8□□□□□ -1.8
RNU4-35P-201ENST00000362588 LIG4P49917 911 aa3.8□□□□□ -1.8
RNU4-35P-201ENST00000362588 CLCN4P51793 760 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms