RNA–Protein interactions for RNA: ENST00000361528.8

CNOT4-203, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT4, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-203ENST00000361528 ADAMTS13Q76LX8 1427 aa12.3□□□□□ -0.44
CNOT4-203ENST00000361528 KDM3BQ7LBC6 1761 aa12.3□□□□□ -0.44
CNOT4-203ENST00000361528 KIF13AQ9H1H9 1805 aa12.3□□□□□ -0.44
CNOT4-203ENST00000361528 FAM47DPA6NHR8 397 aa12.3□□□□□ -0.44
CNOT4-203ENST00000361528 GUCY1A2P33402 732 aa12.3□□□□□ -0.44
CNOT4-203ENST00000361528 PHKA2P46019 1235 aa12.3□□□□□ -0.44
CNOT4-203ENST00000361528 TRAPPC10P48553 1259 aa12.3□□□□□ -0.44
CNOT4-203ENST00000361528 ACTR3P61158 418 aa12.3□□□□□ -0.44
CNOT4-203ENST00000361528 RRP1BQ14684 758 aaKnown RBP12.3□□□□□ -0.44
CNOT4-203ENST00000361528 NONOQ15233 471 aaKnown RBP eCLIP12.3□□□□□ -0.44
CNOT4-203ENST00000361528 ARL6IP4Q66PJ3 421 aaKnown RBP12.3□□□□□ -0.44
CNOT4-203ENST00000361528 CYFIP1Q7L576 1253 aa12.3□□□□□ -0.44
CNOT4-203ENST00000361528 PROSER2Q86WR7 435 aaPredicted RBP12.3□□□□□ -0.44
CNOT4-203ENST00000361528 SLC7A5P1Q8MH63 180 aa12.3□□□□□ -0.44
CNOT4-203ENST00000361528 MARVELD2Q8N4S9 558 aa12.3□□□□□ -0.44
CNOT4-203ENST00000361528 TPCN2Q8NHX9 752 aa12.3□□□□□ -0.44
CNOT4-203ENST00000361528 OXER1Q8TDS5 423 aa12.3□□□□□ -0.44
CNOT4-203ENST00000361528 CCDC85AQ96PX6 553 aaPredicted RBP12.3□□□□□ -0.44
CNOT4-203ENST00000361528 SENP6Q9GZR1 1112 aaPredicted RBP12.3□□□□□ -0.44
CNOT4-203ENST00000361528 GIN1Q9NXP7 522 aa12.3□□□□□ -0.44
CNOT4-203ENST00000361528 PPP1R1BQ9UD71 204 aaPredicted RBP12.3□□□□□ -0.44
CNOT4-203ENST00000361528 FRMPD4Q14CM0 1322 aa12.3□□□□□ -0.44
CNOT4-203ENST00000361528 FLT4P35916 1363 aa12.3□□□□□ -0.44
CNOT4-203ENST00000361528 A2ML1A8K2U0 1454 aa12.29□□□□□ -0.44
CNOT4-203ENST00000361528 C15orf38-AP3S2A0A0A6YYH1 394 aa12.29□□□□□ -0.44
CNOT4-203ENST00000361528 TMEM114B3SHH9 223 aa12.29□□□□□ -0.44
CNOT4-203ENST00000361528 WASLO00401 505 aaPredicted RBP12.29□□□□□ -0.44
CNOT4-203ENST00000361528 PEX1O43933 1283 aa12.29□□□□□ -0.44
CNOT4-203ENST00000361528 SPAG7O75391 227 aa12.29□□□□□ -0.44
CNOT4-203ENST00000361528 DGKIO75912 1065 aa12.29□□□□□ -0.44
CNOT4-203ENST00000361528 OCM2P0CE71 109 aa12.29□□□□□ -0.44
CNOT4-203ENST00000361528 OCMP0CE72 109 aaPredicted RBP12.29□□□□□ -0.44
CNOT4-203ENST00000361528 HOXD10P28358 340 aa12.29□□□□□ -0.44
CNOT4-203ENST00000361528 RPS3AP61247 264 aaKnown RBP12.29□□□□□ -0.44
CNOT4-203ENST00000361528 NR1H3Q13133 447 aa12.29□□□□□ -0.44
CNOT4-203ENST00000361528 SPCS2Q15005 226 aa12.29□□□□□ -0.44
CNOT4-203ENST00000361528 PDK4Q16654 411 aa12.29□□□□□ -0.44
CNOT4-203ENST00000361528 USP41Q3LFD5 358 aa12.29□□□□□ -0.44
CNOT4-203ENST00000361528 MMEL1Q495T6 779 aa12.29□□□□□ -0.44
CNOT4-203ENST00000361528 TTC38Q5R3I4 469 aa12.29□□□□□ -0.44
CNOT4-203ENST00000361528 FAM91A1Q658Y4 838 aa12.29□□□□□ -0.44
CNOT4-203ENST00000361528 TMEM214Q6NUQ4 689 aaKnown RBP12.29□□□□□ -0.44
CNOT4-203ENST00000361528 ZNF804AQ7Z570 1209 aa12.29□□□□□ -0.44
CNOT4-203ENST00000361528 RIC3Q7Z5B4 369 aa12.29□□□□□ -0.44
CNOT4-203ENST00000361528 ARPINQ7Z6K5 226 aa12.29□□□□□ -0.44
CNOT4-203ENST00000361528 CABP7Q86V35 215 aa12.29□□□□□ -0.44
CNOT4-203ENST00000361528 ZNF410Q86VK4 478 aa12.29□□□□□ -0.44
CNOT4-203ENST00000361528 TRIM55Q9BYV6 548 aa12.29□□□□□ -0.44
CNOT4-203ENST00000361528 KLHL4Q9C0H6 718 aa12.29□□□□□ -0.44
CNOT4-203ENST00000361528 Q9H521 79 aa12.29□□□□□ -0.44
CNOT4-203ENST00000361528 MLXIPLQ9NP71 852 aa12.29□□□□□ -0.44
CNOT4-203ENST00000361528 PIH1D3Q9NQM4 214 aaKnown RBP12.29□□□□□ -0.44
CNOT4-203ENST00000361528 GID8Q9NWU2 228 aa12.29□□□□□ -0.44
CNOT4-203ENST00000361528 FBXO9Q9UK97 447 aaPredicted RBP12.29□□□□□ -0.44
CNOT4-203ENST00000361528 MTUS1Q9ULD2 1270 aa12.29□□□□□ -0.44
CNOT4-203ENST00000361528 SNX24Q9Y343 169 aa12.29□□□□□ -0.44
CNOT4-203ENST00000361528 KAT6BQ8WYB5 2073 aa12.29□□□□□ -0.44
CNOT4-203ENST00000361528 MTRF1O75570 445 aaKnown RBP12.29□□□□□ -0.44
CNOT4-203ENST00000361528 PGM3O95394 542 aa12.29□□□□□ -0.44
CNOT4-203ENST00000361528 FGGP02679 453 aa12.29□□□□□ -0.44
CNOT4-203ENST00000361528 CREB1P16220 341 aa12.29□□□□□ -0.44
CNOT4-203ENST00000361528 FGFR4P22455 802 aa12.29□□□□□ -0.44
CNOT4-203ENST00000361528 CHRNA3P32297 505 aa12.29□□□□□ -0.44
CNOT4-203ENST00000361528 PGM1P36871 562 aa12.29□□□□□ -0.44
CNOT4-203ENST00000361528 NR1H2P55055 460 aa12.29□□□□□ -0.44
CNOT4-203ENST00000361528 CSE1LP55060 971 aaKnown RBP12.29□□□□□ -0.44
CNOT4-203ENST00000361528 KCNC4Q03721 635 aa12.29□□□□□ -0.44
CNOT4-203ENST00000361528 SPARCL1Q14515 664 aa12.29□□□□□ -0.44
CNOT4-203ENST00000361528 KRT81Q14533 505 aa12.29□□□□□ -0.44
CNOT4-203ENST00000361528 LONRF1Q17RB8 773 aa12.29□□□□□ -0.44
CNOT4-203ENST00000361528 TMEM67Q5HYA8 995 aa12.29□□□□□ -0.44
CNOT4-203ENST00000361528 CCDC62Q6P9F0 684 aa12.29□□□□□ -0.44
CNOT4-203ENST00000361528 FAM172AQ8WUF8 416 aa12.29□□□□□ -0.44
CNOT4-203ENST00000361528 ART4Q93070 314 aa12.29□□□□□ -0.44
CNOT4-203ENST00000361528 TUT1Q9H6E5 874 aaKnown RBP12.29□□□□□ -0.44
CNOT4-203ENST00000361528 ZNF696Q9H7X3 374 aa12.29□□□□□ -0.44
CNOT4-203ENST00000361528 CCDC61Q9Y6R9 512 aa12.29□□□□□ -0.44
CNOT4-203ENST00000361528 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.29□□□□□ -0.44
CNOT4-203ENST00000361528 MYH6P13533 1939 aa12.29□□□□□ -0.44
CNOT4-203ENST00000361528 A0A087X0T9 212 aa12.28□□□□□ -0.44
CNOT4-203ENST00000361528 DYTNA2CJ06 578 aa12.28□□□□□ -0.44
CNOT4-203ENST00000361528 DENRO43583 198 aaKnown RBP12.28□□□□□ -0.44
CNOT4-203ENST00000361528 TLR2O60603 784 aa12.28□□□□□ -0.44
CNOT4-203ENST00000361528 ESRRBO95718 433 aa12.28□□□□□ -0.44
CNOT4-203ENST00000361528 FAM228BP0C875 321 aa12.28□□□□□ -0.44
CNOT4-203ENST00000361528 RARBP10826 455 aa12.28□□□□□ -0.44
CNOT4-203ENST00000361528 CDH3P22223 829 aa12.28□□□□□ -0.44
CNOT4-203ENST00000361528 GNA11P29992 359 aa12.28□□□□□ -0.44
CNOT4-203ENST00000361528 EIF2B2P49770 351 aaKnown RBP12.28□□□□□ -0.44
CNOT4-203ENST00000361528 CREB5Q02930 508 aa12.28□□□□□ -0.44
CNOT4-203ENST00000361528 LRRC63Q05C16 580 aa12.28□□□□□ -0.44
CNOT4-203ENST00000361528 PTGDRQ13258 359 aa12.28□□□□□ -0.44
CNOT4-203ENST00000361528 RTN1Q16799 776 aa12.28□□□□□ -0.44
CNOT4-203ENST00000361528 MYLK3Q32MK0 819 aa12.28□□□□□ -0.44
CNOT4-203ENST00000361528 FAM209AQ5JX71 171 aa12.28□□□□□ -0.44
CNOT4-203ENST00000361528 C6orf183Q5T699 404 aa12.28□□□□□ -0.44
CNOT4-203ENST00000361528 FOXR2Q6PJQ5 311 aa12.28□□□□□ -0.44
CNOT4-203ENST00000361528 DCDC5Q6ZRR9 648 aa12.28□□□□□ -0.44
CNOT4-203ENST00000361528 CATIPQ7Z7H3 387 aa12.28□□□□□ -0.44
CNOT4-203ENST00000361528 MTDHQ86UE4 582 aaKnown RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms