RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 SNX27Q96L92 541 aa15.01□□□□□ -0.01
PDLIM5-203ENST00000359265 FNBP1Q96RU3 617 aa15.01□□□□□ -0.01
PDLIM5-203ENST00000359265 HAPLN2Q9GZV7 340 aa15.01□□□□□ -0.01
PDLIM5-203ENST00000359265 GANQ9H2C0 597 aa15.01□□□□□ -0.01
PDLIM5-203ENST00000359265 TMEM8AQ9HCN3 771 aa15.01□□□□□ -0.01
PDLIM5-203ENST00000359265 RBAKQ9NYW8 714 aaPredicted RBP15.01□□□□□ -0.01
PDLIM5-203ENST00000359265 OGDHLQ9ULD0 1010 aa15.01□□□□□ -0.01
PDLIM5-203ENST00000359265 PDCD11Q14690 1871 aaKnown RBP15.01□□□□□ -0.01
PDLIM5-203ENST00000359265 A0A0U1RQG5 324 aaPredicted RBP15□□□□□ -0.01
PDLIM5-203ENST00000359265 A0A1W2PQ45 241 aaPredicted RBP15□□□□□ -0.01
PDLIM5-203ENST00000359265 A0A1W2PQY0 241 aa15□□□□□ -0.01
PDLIM5-203ENST00000359265 TTLL13PA6NNM8 815 aa15□□□□□ -0.01
PDLIM5-203ENST00000359265 LRRIQ3A6PVS8 624 aaPredicted RBP15□□□□□ -0.01
PDLIM5-203ENST00000359265 ABLIM1O14639 778 aa15□□□□□ -0.01
PDLIM5-203ENST00000359265 B4GALT5O43286 388 aa15□□□□□ -0.01
PDLIM5-203ENST00000359265 SLC9A1P19634 815 aa15□□□□□ -0.01
PDLIM5-203ENST00000359265 RFX1P22670 979 aa15□□□□□ -0.01
PDLIM5-203ENST00000359265 GCLMP48507 274 aa15□□□□□ -0.01
PDLIM5-203ENST00000359265 ACOT2P49753 483 aa15□□□□□ -0.01
PDLIM5-203ENST00000359265 POLR2FP61218 127 aaKnown RBP15□□□□□ -0.01
PDLIM5-203ENST00000359265 PPP3CAQ08209 521 aa15□□□□□ -0.01
PDLIM5-203ENST00000359265 SURF1Q15526 300 aa15□□□□□ -0.01
PDLIM5-203ENST00000359265 AMHR2Q16671 573 aa15□□□□□ -0.01
PDLIM5-203ENST00000359265 KYAT1Q16773 422 aa15□□□□□ -0.01
PDLIM5-203ENST00000359265 KIZQ2M2Z5 673 aa15□□□□□ -0.01
PDLIM5-203ENST00000359265 C1orf220Q5T0J3 134 aa15□□□□□ -0.01
PDLIM5-203ENST00000359265 KRT39Q6A163 491 aa15□□□□□ -0.01
PDLIM5-203ENST00000359265 TRIM65Q6PJ69 517 aa15□□□□□ -0.01
PDLIM5-203ENST00000359265 RSPH3Q86UC2 560 aa15□□□□□ -0.01
PDLIM5-203ENST00000359265 BRSK2Q8IWQ3 736 aa15□□□□□ -0.01
PDLIM5-203ENST00000359265 INTS2Q9H0H0 1204 aaKnown RBP15□□□□□ -0.01
PDLIM5-203ENST00000359265 ADAMTS10Q9H324 1103 aa15□□□□□ -0.01
PDLIM5-203ENST00000359265 PTPRHQ9HD43 1115 aa15□□□□□ -0.01
PDLIM5-203ENST00000359265 STARD7Q9NQZ5 370 aa15□□□□□ -0.01
PDLIM5-203ENST00000359265 FBXL5Q9UKA1 691 aa15□□□□□ -0.01
PDLIM5-203ENST00000359265 TRIP11Q15643 1979 aa14.99□□□□□ -0.01
PDLIM5-203ENST00000359265 M0QZ92 97 aa14.99□□□□□ -0.01
PDLIM5-203ENST00000359265 CCP110O43303 1012 aa14.99□□□□□ -0.01
PDLIM5-203ENST00000359265 TSPAN1O60635 241 aa14.99□□□□□ -0.01
PDLIM5-203ENST00000359265 GPR32O75388 356 aa14.99□□□□□ -0.01
PDLIM5-203ENST00000359265 NOL4O94818 638 aa14.99□□□□□ -0.01
PDLIM5-203ENST00000359265 DLATP10515 647 aaKnown RBP14.99□□□□□ -0.01
PDLIM5-203ENST00000359265 MCF2P10911 925 aa14.99□□□□□ -0.01
PDLIM5-203ENST00000359265 ZNF200P98182 395 aaPredicted RBP14.99□□□□□ -0.01
PDLIM5-203ENST00000359265 NCBP1Q09161 790 aaKnown RBP14.99□□□□□ -0.01
PDLIM5-203ENST00000359265 TMEM62Q0P6H9 643 aa14.99□□□□□ -0.01
PDLIM5-203ENST00000359265 MEA1Q16626 185 aa14.99□□□□□ -0.01
PDLIM5-203ENST00000359265 EPC2Q52LR7 807 aa14.99□□□□□ -0.01
PDLIM5-203ENST00000359265 KLHDC7AQ5VTJ3 777 aa14.99□□□□□ -0.01
PDLIM5-203ENST00000359265 EEF1DP3Q658K8 133 aa14.99□□□□□ -0.01
PDLIM5-203ENST00000359265 CRELD2Q6UXH1 353 aaPredicted RBP14.99□□□□□ -0.01
PDLIM5-203ENST00000359265 RRAGAQ7L523 313 aa14.99□□□□□ -0.01
PDLIM5-203ENST00000359265 BAP1Q92560 729 aa14.99□□□□□ -0.01
PDLIM5-203ENST00000359265 CGRRF1Q99675 332 aa14.99□□□□□ -0.01
PDLIM5-203ENST00000359265 ADPGKQ9BRR6 497 aa14.99□□□□□ -0.01
PDLIM5-203ENST00000359265 TMEM117Q9H0C3 514 aa14.99□□□□□ -0.01
PDLIM5-203ENST00000359265 CDT1Q9H211 546 aa14.99□□□□□ -0.01
PDLIM5-203ENST00000359265 SIX2Q9NPC8 291 aa14.99□□□□□ -0.01
PDLIM5-203ENST00000359265 NLRC4Q9NPP4 1024 aa14.99□□□□□ -0.01
PDLIM5-203ENST00000359265 MYO6Q9UM54 1294 aa14.99□□□□□ -0.01
PDLIM5-203ENST00000359265 LRRC53A6NM62 1247 aa14.98□□□□□ -0.01
PDLIM5-203ENST00000359265 TULP1O00294 542 aaPredicted RBP14.98□□□□□ -0.01
PDLIM5-203ENST00000359265 FAM189A1O60320 539 aa14.98□□□□□ -0.01
PDLIM5-203ENST00000359265 IQCF3P0C7M6 154 aa14.98□□□□□ -0.01
PDLIM5-203ENST00000359265 COL6A1P12109 1028 aa14.98□□□□□ -0.01
PDLIM5-203ENST00000359265 ACTN1P12814 892 aa14.98□□□□□ -0.01
PDLIM5-203ENST00000359265 DARSP14868 501 aaKnown RBP14.98□□□□□ -0.01
PDLIM5-203ENST00000359265 UCHL3P15374 230 aa14.98□□□□□ -0.01
PDLIM5-203ENST00000359265 ARF4P18085 180 aaPredicted RBP14.98□□□□□ -0.01
PDLIM5-203ENST00000359265 HNRNPH3P31942 346 aaKnown RBP14.98□□□□□ -0.01
PDLIM5-203ENST00000359265 CDK17Q00537 523 aa14.98□□□□□ -0.01
PDLIM5-203ENST00000359265 SHHQ15465 462 aa14.98□□□□□ -0.01
PDLIM5-203ENST00000359265 ZBTB41Q5SVQ8 909 aa14.98□□□□□ -0.01
PDLIM5-203ENST00000359265 SFMBT2Q5VUG0 894 aa14.98□□□□□ -0.01
PDLIM5-203ENST00000359265 GDF6Q6KF10 455 aaPredicted RBP14.98□□□□□ -0.01
PDLIM5-203ENST00000359265 CATSPER4Q7RTX7 472 aa14.98□□□□□ -0.01
PDLIM5-203ENST00000359265 EHBP1Q8NDI1 1231 aa14.98□□□□□ -0.01
PDLIM5-203ENST00000359265 SYN2Q92777 582 aaPredicted RBP14.98□□□□□ -0.01
PDLIM5-203ENST00000359265 SPAG5Q96R06 1193 aa14.98□□□□□ -0.01
PDLIM5-203ENST00000359265 OSMRQ99650 979 aa14.98□□□□□ -0.01
PDLIM5-203ENST00000359265 PDZD7Q9H5P4 517 aa14.98□□□□□ -0.01
PDLIM5-203ENST00000359265 KCND1Q9NSA2 647 aa14.98□□□□□ -0.01
PDLIM5-203ENST00000359265 CPSF3Q9UKF6 684 aaKnown RBP14.98□□□□□ -0.01
PDLIM5-203ENST00000359265 NOD1Q9Y239 953 aa14.98□□□□□ -0.01
PDLIM5-203ENST00000359265 GINS2Q9Y248 185 aa14.98□□□□□ -0.01
PDLIM5-203ENST00000359265 FHOD1Q9Y613 1164 aa14.98□□□□□ -0.01
PDLIM5-203ENST00000359265 SOWAHDA6NJG2 315 aa14.97□□□□□ -0.01
PDLIM5-203ENST00000359265 CSDE1O75534 798 aaKnown RBP14.97□□□□□ -0.01
PDLIM5-203ENST00000359265 TNNI1P19237 187 aa14.97□□□□□ -0.01
PDLIM5-203ENST00000359265 CRYBB1P53674 252 aaPredicted RBP14.97□□□□□ -0.01
PDLIM5-203ENST00000359265 AP3M2P53677 418 aa14.97□□□□□ -0.01
PDLIM5-203ENST00000359265 CLDN10P78369 228 aa14.97□□□□□ -0.01
PDLIM5-203ENST00000359265 MRPS6P82932 125 aaKnown RBP14.97□□□□□ -0.01
PDLIM5-203ENST00000359265 POU5F1Q01860 360 aaKnown RBP14.97□□□□□ -0.01
PDLIM5-203ENST00000359265 RAPGEF1Q13905 1077 aa14.97□□□□□ -0.01
PDLIM5-203ENST00000359265 SNX17Q15036 470 aa14.97□□□□□ -0.01
PDLIM5-203ENST00000359265 PTGISQ16647 500 aa14.97□□□□□ -0.01
PDLIM5-203ENST00000359265 DCAF4L1Q3SXM0 396 aa14.97□□□□□ -0.01
PDLIM5-203ENST00000359265 C9orf50Q5SZB4 431 aa14.97□□□□□ -0.01
PDLIM5-203ENST00000359265 DPY19L2P1Q6NXN4 242 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms