RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 SMARCA1P28370 1054 aa14.53□□□□□ -0.08
VCP-201ENST00000358901 HERVK_113P62684 666 aa14.53□□□□□ -0.08
VCP-201ENST00000358901 EARS2Q5JPH6 523 aaKnown RBP14.53□□□□□ -0.08
VCP-201ENST00000358901 RSBN1LQ6PCB5 846 aaPredicted RBP14.53□□□□□ -0.08
VCP-201ENST00000358901 MKNK1Q9BUB5 465 aa14.53□□□□□ -0.08
VCP-201ENST00000358901 CARD9Q9H257 536 aa14.53□□□□□ -0.08
VCP-201ENST00000358901 ANLNQ9NQW6 1124 aa14.53□□□□□ -0.08
VCP-201ENST00000358901 TOPORSQ9NS56 1045 aaPredicted RBP14.53□□□□□ -0.08
VCP-201ENST00000358901 LCMT1Q9UIC8 334 aa14.53□□□□□ -0.08
VCP-201ENST00000358901 ABCA9Q8IUA7 1624 aa14.53□□□□□ -0.08
VCP-201ENST00000358901 FAM205AQ6ZU69 1335 aa14.53□□□□□ -0.08
VCP-201ENST00000358901 TFRCP02786 760 aaKnown RBP14.52□□□□□ -0.08
VCP-201ENST00000358901 KRT10P13645 584 aa14.52□□□□□ -0.08
VCP-201ENST00000358901 EEF1B2P24534 225 aaKnown RBP14.52□□□□□ -0.08
VCP-201ENST00000358901 EIF3EP60228 445 aaKnown RBP14.52□□□□□ -0.08
VCP-201ENST00000358901 TSTA3Q13630 321 aaPredicted RBP14.52□□□□□ -0.08
VCP-201ENST00000358901 PKN1Q16512 942 aa14.52□□□□□ -0.08
VCP-201ENST00000358901 FIGNQ5HY92 759 aa14.52□□□□□ -0.08
VCP-201ENST00000358901 TRIML2Q8N7C3 387 aa14.52□□□□□ -0.08
VCP-201ENST00000358901 TPCN2Q8NHX9 752 aa14.52□□□□□ -0.08
VCP-201ENST00000358901 CASKIN2Q8WXE0 1202 aa14.52□□□□□ -0.08
VCP-201ENST00000358901 OSBPL1AQ9BXW6 950 aa14.52□□□□□ -0.08
VCP-201ENST00000358901 SEMA6BQ9H3T3 888 aa14.52□□□□□ -0.08
VCP-201ENST00000358901 PPFIA2O75334 1257 aa14.52□□□□□ -0.08
VCP-201ENST00000358901 DGAT1O75907 488 aa14.52□□□□□ -0.08
VCP-201ENST00000358901 PMLP29590 882 aa14.52□□□□□ -0.08
VCP-201ENST00000358901 CENPPQ6IPU0 288 aa14.52□□□□□ -0.08
VCP-201ENST00000358901 LRRC31Q6UY01 552 aa14.52□□□□□ -0.08
VCP-201ENST00000358901 ABI1Q8IZP0 508 aa14.52□□□□□ -0.08
VCP-201ENST00000358901 RNF149Q8NC42 400 aa14.52□□□□□ -0.08
VCP-201ENST00000358901 DAGLBQ8NCG7 672 aa14.52□□□□□ -0.08
VCP-201ENST00000358901 TMEM143Q96AN5 459 aa14.52□□□□□ -0.08
VCP-201ENST00000358901 PACSIN1Q9BY11 444 aa14.52□□□□□ -0.08
VCP-201ENST00000358901 ATF5Q9Y2D1 282 aaPredicted RBP14.52□□□□□ -0.08
VCP-201ENST00000358901 TYK2P29597 1187 aa14.52□□□□□ -0.09
VCP-201ENST00000358901 COPS2P61201 443 aa14.52□□□□□ -0.09
VCP-201ENST00000358901 DALRD3Q5D0E6 543 aaKnown RBP14.52□□□□□ -0.09
VCP-201ENST00000358901 FSCBQ5H9T9 825 aa14.52□□□□□ -0.09
VCP-201ENST00000358901 PLA2G4FQ68DD2 849 aa14.52□□□□□ -0.09
VCP-201ENST00000358901 TRPM8Q7Z2W7 1104 aa14.52□□□□□ -0.09
VCP-201ENST00000358901 CCDC138Q96M89 665 aa14.52□□□□□ -0.09
VCP-201ENST00000358901 ANKZF1Q9H8Y5 726 aa14.52□□□□□ -0.09
VCP-201ENST00000358901 JPH1Q9HDC5 661 aaPredicted RBP14.52□□□□□ -0.09
VCP-201ENST00000358901 BFARQ9NZS9 450 aa14.52□□□□□ -0.09
VCP-201ENST00000358901 NEU2Q9Y3R4 380 aa14.52□□□□□ -0.09
VCP-201ENST00000358901 NPEPPSP55786 919 aa14.52□□□□□ -0.09
VCP-201ENST00000358901 BAATQ14032 418 aaPredicted RBP14.52□□□□□ -0.09
VCP-201ENST00000358901 BARGINQ6ZT62 677 aa14.52□□□□□ -0.09
VCP-201ENST00000358901 LINC00116Q8NCU8 138 aa14.52□□□□□ -0.09
VCP-201ENST00000358901 C18orf8Q96DM3 657 aa14.52□□□□□ -0.09
VCP-201ENST00000358901 MRPL46Q9H2W6 279 aaKnown RBP14.52□□□□□ -0.09
VCP-201ENST00000358901 ACAD9Q9H845 621 aa14.52□□□□□ -0.09
VCP-201ENST00000358901 SLC12A6Q9UHW9 1150 aa14.52□□□□□ -0.09
VCP-201ENST00000358901 COL3A1P02461 1466 aaPredicted RBP14.52□□□□□ -0.09
VCP-201ENST00000358901 RSPH10B2B2RC85 870 aa14.51□□□□□ -0.09
VCP-201ENST00000358901 RSPH10BP0C881 870 aa14.51□□□□□ -0.09
VCP-201ENST00000358901 CIITAP33076 1130 aa14.51□□□□□ -0.09
VCP-201ENST00000358901 PMS1P54277 932 aaKnown RBP14.51□□□□□ -0.09
VCP-201ENST00000358901 ARPP19P56211 112 aa14.51□□□□□ -0.09
VCP-201ENST00000358901 PPP4CP60510 307 aa14.51□□□□□ -0.09
VCP-201ENST00000358901 KLC3Q6P597 504 aa14.51□□□□□ -0.09
VCP-201ENST00000358901 LCA5Q86VQ0 697 aa14.51□□□□□ -0.09
VCP-201ENST00000358901 THAP2Q9H0W7 228 aa14.51□□□□□ -0.09
VCP-201ENST00000358901 SUDS3Q9H7L9 328 aaPredicted RBP14.51□□□□□ -0.09
VCP-201ENST00000358901 GOLGA8CPA6NN73 597 aa14.51□□□□□ -0.09
VCP-201ENST00000358901 KPNA7A9QM74 516 aa14.51□□□□□ -0.09
VCP-201ENST00000358901 FGFR2P21802 821 aa14.51□□□□□ -0.09
VCP-201ENST00000358901 TNFAIP2Q03169 654 aa14.51□□□□□ -0.09
VCP-201ENST00000358901 KIF2BQ8N4N8 673 aa14.51□□□□□ -0.09
VCP-201ENST00000358901 ERP27Q96DN0 273 aa14.51□□□□□ -0.09
VCP-201ENST00000358901 C2orf40Q9H1Z8 148 aa14.51□□□□□ -0.09
VCP-201ENST00000358901 PCDHB2Q9Y5E7 798 aa14.51□□□□□ -0.09
VCP-201ENST00000358901 ZC3H13Q5T200 1668 aaKnown RBP14.51□□□□□ -0.09
VCP-201ENST00000358901 HUS1O60921 280 aa14.51□□□□□ -0.09
VCP-201ENST00000358901 S100BP04271 92 aaPredicted RBP14.51□□□□□ -0.09
VCP-201ENST00000358901 APRTP07741 180 aa14.51□□□□□ -0.09
VCP-201ENST00000358901 IREB2P48200 963 aaKnown RBP14.51□□□□□ -0.09
VCP-201ENST00000358901 RABGAP1LQ5R372 815 aa14.51□□□□□ -0.09
VCP-201ENST00000358901 TMTC4Q5T4D3 741 aa14.51□□□□□ -0.09
VCP-201ENST00000358901 RGS9BPQ6ZS82 235 aa14.51□□□□□ -0.09
VCP-201ENST00000358901 SYDE1Q6ZW31 735 aaPredicted RBP14.51□□□□□ -0.09
VCP-201ENST00000358901 ADGRA1Q86SQ6 560 aa14.51□□□□□ -0.09
VCP-201ENST00000358901 FGD4Q96M96 766 aa14.51□□□□□ -0.09
VCP-201ENST00000358901 CRAMP1Q96RY5 1269 aa14.51□□□□□ -0.09
VCP-201ENST00000358901 SMG5Q9UPR3 1016 aaKnown RBP14.51□□□□□ -0.09
VCP-201ENST00000358901 CD163L1Q9NR16 1453 aa14.51□□□□□ -0.09
VCP-201ENST00000358901 FAM47DPA6NHR8 397 aa14.5□□□□□ -0.09
VCP-201ENST00000358901 CASP4P49662 377 aa14.5□□□□□ -0.09
VCP-201ENST00000358901 RBBP8NLQ8NC74 664 aaPredicted RBP14.5□□□□□ -0.09
VCP-201ENST00000358901 SGSM3Q96HU1 749 aa14.5□□□□□ -0.09
VCP-201ENST00000358901 KLF6Q99612 283 aaPredicted RBP14.5□□□□□ -0.09
VCP-201ENST00000358901 PI4K2AQ9BTU6 479 aa14.5□□□□□ -0.09
VCP-201ENST00000358901 RPAP3Q9H6T3 665 aaPredicted RBP14.5□□□□□ -0.09
VCP-201ENST00000358901 FOXN3O00409 490 aaPredicted RBP14.5□□□□□ -0.09
VCP-201ENST00000358901 PIK3R2O00459 728 aa14.5□□□□□ -0.09
VCP-201ENST00000358901 PRLRP16471 622 aa14.5□□□□□ -0.09
VCP-201ENST00000358901 KDSRQ06136 332 aa14.5□□□□□ -0.09
VCP-201ENST00000358901 STRIP1Q5VSL9 837 aa14.5□□□□□ -0.09
VCP-201ENST00000358901 RNF168Q8IYW5 571 aaPredicted RBP14.5□□□□□ -0.09
VCP-201ENST00000358901 FBXL16Q8N461 479 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms