RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 ARID2Q68CP9 1835 aa9.2□□□□□ -0.94
RFX3-202ENST00000358730 AGTP01019 485 aa9.2□□□□□ -0.94
RFX3-202ENST00000358730 MMP13P45452 471 aa9.2□□□□□ -0.94
RFX3-202ENST00000358730 KRT17Q04695 432 aa9.2□□□□□ -0.94
RFX3-202ENST00000358730 CYP24A1Q07973 514 aa9.2□□□□□ -0.94
RFX3-202ENST00000358730 PLCB4Q15147 1175 aa9.2□□□□□ -0.94
RFX3-202ENST00000358730 C6orf118Q5T5N4 469 aa9.2□□□□□ -0.94
RFX3-202ENST00000358730 ACAD10Q6JQN1 1059 aa9.2□□□□□ -0.94
RFX3-202ENST00000358730 SLC39A4Q6P5W5 647 aa9.2□□□□□ -0.94
RFX3-202ENST00000358730 SV2AQ7L0J3 742 aa9.2□□□□□ -0.94
RFX3-202ENST00000358730 CYFIP1Q7L576 1253 aa9.2□□□□□ -0.94
RFX3-202ENST00000358730 C12orf50Q8NA57 414 aaPredicted RBP9.2□□□□□ -0.94
RFX3-202ENST00000358730 C1orf54Q8WWF1 131 aa9.2□□□□□ -0.94
RFX3-202ENST00000358730 ART4Q93070 314 aa9.2□□□□□ -0.94
RFX3-202ENST00000358730 FAM84AQ96KN4 292 aa9.2□□□□□ -0.94
RFX3-202ENST00000358730 CEP170P1Q96L14 293 aa9.2□□□□□ -0.94
RFX3-202ENST00000358730 OSBPL7Q9BZF2 842 aa9.2□□□□□ -0.94
RFX3-202ENST00000358730 CCDC113Q9H0I3 377 aa9.2□□□□□ -0.94
RFX3-202ENST00000358730 CNOT7Q9UIV1 285 aaKnown RBP9.2□□□□□ -0.94
RFX3-202ENST00000358730 KIAA1217Q5T5P2 1943 aa9.19□□□□□ -0.94
RFX3-202ENST00000358730 WNT10BO00744 389 aa9.19□□□□□ -0.94
RFX3-202ENST00000358730 RARGP13631 454 aa9.19□□□□□ -0.94
RFX3-202ENST00000358730 MAPK4P31152 587 aa9.19□□□□□ -0.94
RFX3-202ENST00000358730 GTF2A1P52655 376 aaPredicted RBP9.19□□□□□ -0.94
RFX3-202ENST00000358730 SNX1Q13596 522 aa9.19□□□□□ -0.94
RFX3-202ENST00000358730 CLEC16AQ2KHT3 1053 aa9.19□□□□□ -0.94
RFX3-202ENST00000358730 SPRED3Q2MJR0 410 aa9.19□□□□□ -0.94
RFX3-202ENST00000358730 CROCCP2Q86T23 111 aa9.19□□□□□ -0.94
RFX3-202ENST00000358730 RTKN2Q8IZC4 609 aa9.19□□□□□ -0.94
RFX3-202ENST00000358730 TTLL6Q8N841 843 aa9.19□□□□□ -0.94
RFX3-202ENST00000358730 TMC2Q8TDI7 906 aa9.19□□□□□ -0.94
RFX3-202ENST00000358730 ATXN2LQ8WWM7 1075 aaKnown RBP9.19□□□□□ -0.94
RFX3-202ENST00000358730 PSPC1Q8WXF1 523 aaKnown RBP9.19□□□□□ -0.94
RFX3-202ENST00000358730 CENPTQ96BT3 561 aa9.19□□□□□ -0.94
RFX3-202ENST00000358730 BICD1Q96G01 975 aa9.19□□□□□ -0.94
RFX3-202ENST00000358730 KIAA1683Q9H0B3 1180 aa9.19□□□□□ -0.94
RFX3-202ENST00000358730 STMN4Q9H169 189 aaPredicted RBP9.19□□□□□ -0.94
RFX3-202ENST00000358730 ADAM7Q9H2U9 754 aa9.19□□□□□ -0.94
RFX3-202ENST00000358730 ACTR5Q9H9F9 607 aaPredicted RBP9.19□□□□□ -0.94
RFX3-202ENST00000358730 C1orf112Q9NSG2 853 aa9.19□□□□□ -0.94
RFX3-202ENST00000358730 ASIC3Q9UHC3 531 aa9.19□□□□□ -0.94
RFX3-202ENST00000358730 PGAP2Q9UHJ9 254 aa9.19□□□□□ -0.94
RFX3-202ENST00000358730 ADGRA3Q8IWK6 1321 aa9.19□□□□□ -0.94
RFX3-202ENST00000358730 DOCK5Q9H7D0 1870 aa9.19□□□□□ -0.94
RFX3-202ENST00000358730 RASGRF2O14827 1237 aa9.19□□□□□ -0.94
RFX3-202ENST00000358730 MNAT1P51948 309 aa9.19□□□□□ -0.94
RFX3-202ENST00000358730 SP4Q02446 784 aa9.19□□□□□ -0.94
RFX3-202ENST00000358730 ANKRD20A8PQ5CZ79 823 aa9.19□□□□□ -0.94
RFX3-202ENST00000358730 NLRX1Q86UT6 975 aa9.19□□□□□ -0.94
RFX3-202ENST00000358730 GPD1LQ8N335 351 aa9.19□□□□□ -0.94
RFX3-202ENST00000358730 MTMR14Q8NCE2 650 aa9.19□□□□□ -0.94
RFX3-202ENST00000358730 CCDC114Q96M63 670 aa9.19□□□□□ -0.94
RFX3-202ENST00000358730 MFSD14AQ96MC6 490 aa9.19□□□□□ -0.94
RFX3-202ENST00000358730 MOV10L1Q9BXT6 1211 aaKnown RBP9.19□□□□□ -0.94
RFX3-202ENST00000358730 TRIM7Q9C029 511 aa9.19□□□□□ -0.94
RFX3-202ENST00000358730 LRRC19Q9H756 370 aa9.19□□□□□ -0.94
RFX3-202ENST00000358730 INTS9Q9NV88 658 aaKnown RBP9.19□□□□□ -0.94
RFX3-202ENST00000358730 MAP3K20Q9NYL2 800 aaKnown RBP9.19□□□□□ -0.94
RFX3-202ENST00000358730 GABBR1Q9UBS5 961 aa9.19□□□□□ -0.94
RFX3-202ENST00000358730 GRIN3BO60391 1043 aa9.18□□□□□ -0.94
RFX3-202ENST00000358730 ATP2C2O75185 946 aa9.18□□□□□ -0.94
RFX3-202ENST00000358730 GTF2H1P32780 548 aa9.18□□□□□ -0.94
RFX3-202ENST00000358730 MTMR2Q13614 643 aa9.18□□□□□ -0.94
RFX3-202ENST00000358730 OTUD6AQ7L8S5 288 aa9.18□□□□□ -0.94
RFX3-202ENST00000358730 PHLDB2Q86SQ0 1253 aa9.18□□□□□ -0.94
RFX3-202ENST00000358730 NIM1KQ8IY84 436 aa9.18□□□□□ -0.94
RFX3-202ENST00000358730 SPIRE2Q8WWL2 714 aa9.18□□□□□ -0.94
RFX3-202ENST00000358730 ATG4AQ8WYN0 398 aa9.18□□□□□ -0.94
RFX3-202ENST00000358730 FBXL18Q96ME1 805 aa9.18□□□□□ -0.94
RFX3-202ENST00000358730 CEP89Q96ST8 783 aa9.18□□□□□ -0.94
RFX3-202ENST00000358730 FAM213AQ9BRX8 229 aa9.18□□□□□ -0.94
RFX3-202ENST00000358730 CDC42EP4Q9H3Q1 356 aaKnown RBP9.18□□□□□ -0.94
RFX3-202ENST00000358730 PCDHA10Q9Y5I2 948 aa9.18□□□□□ -0.94
RFX3-202ENST00000358730 ZBED4O75132 1171 aa9.18□□□□□ -0.94
RFX3-202ENST00000358730 ACSL3O95573 720 aa9.18□□□□□ -0.94
RFX3-202ENST00000358730 GCNT1Q02742 428 aa9.18□□□□□ -0.94
RFX3-202ENST00000358730 MAP3K10Q02779 954 aa9.18□□□□□ -0.94
RFX3-202ENST00000358730 CCDC38Q502W7 563 aa9.18□□□□□ -0.94
RFX3-202ENST00000358730 LMBRD2Q68DH5 695 aaPredicted RBP9.18□□□□□ -0.94
RFX3-202ENST00000358730 CCDC197Q8NCU1 140 aa9.18□□□□□ -0.94
RFX3-202ENST00000358730 AGBL3Q8NEM8 1001 aa9.18□□□□□ -0.94
RFX3-202ENST00000358730 ATP6V0A1Q93050 837 aa9.18□□□□□ -0.94
RFX3-202ENST00000358730 ZNF317Q96PQ6 595 aaPredicted RBP9.18□□□□□ -0.94
RFX3-202ENST00000358730 PRMT1Q99873 361 aaKnown RBP9.18□□□□□ -0.94
RFX3-202ENST00000358730 DDX23Q9BUQ8 820 aaKnown RBP9.18□□□□□ -0.94
RFX3-202ENST00000358730 TMEM109Q9BVC6 243 aa9.18□□□□□ -0.94
RFX3-202ENST00000358730 RPAP3Q9H6T3 665 aaPredicted RBP9.18□□□□□ -0.94
RFX3-202ENST00000358730 CHST7Q9NS84 486 aa9.18□□□□□ -0.94
RFX3-202ENST00000358730 SEPT9Q9UHD8 586 aaPredicted RBP9.18□□□□□ -0.94
RFX3-202ENST00000358730 MROH7Q68CQ1 1323 aa9.18□□□□□ -0.94
RFX3-202ENST00000358730 DNM1LO00429 736 aa9.18□□□□□ -0.94
RFX3-202ENST00000358730 FSCN2O14926 492 aa9.18□□□□□ -0.94
RFX3-202ENST00000358730 ZNF862O60290 1169 aa9.18□□□□□ -0.94
RFX3-202ENST00000358730 SCP2P22307 547 aa9.18□□□□□ -0.94
RFX3-202ENST00000358730 RRM1P23921 792 aa9.18□□□□□ -0.94
RFX3-202ENST00000358730 CCND2P30279 289 aa9.18□□□□□ -0.94
RFX3-202ENST00000358730 IFNAR2P48551 515 aa9.18□□□□□ -0.94
RFX3-202ENST00000358730 MCCD1P59942 119 aaPredicted RBP9.18□□□□□ -0.94
RFX3-202ENST00000358730 SF3A3Q12874 501 aaKnown RBP eCLIP9.18□□□□□ -0.94
RFX3-202ENST00000358730 AUHQ13825 339 aaKnown RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms