RNA–Protein interactions for RNA: ENST00000358392.6

COL11A1-202, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,327 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-202ENST00000358392 CCDC144BQ3MJ40 725 aa11.78□□□□□ -0.52
COL11A1-202ENST00000358392 ZFATQ9P243 1243 aa11.78□□□□□ -0.52
COL11A1-202ENST00000358392 XPO7Q9UIA9 1087 aaKnown RBP11.78□□□□□ -0.52
COL11A1-202ENST00000358392 RAPGEF6Q8TEU7 1601 aa11.78□□□□□ -0.52
COL11A1-202ENST00000358392 USP17L15C9J2P7 530 aa11.78□□□□□ -0.52
COL11A1-202ENST00000358392 USP17L13C9JLJ4 530 aa11.78□□□□□ -0.52
COL11A1-202ENST00000358392 USP17L11C9JVI0 530 aa11.78□□□□□ -0.52
COL11A1-202ENST00000358392 USP17L18D6R9N7 530 aa11.78□□□□□ -0.52
COL11A1-202ENST00000358392 USP17L22D6RA61 530 aa11.78□□□□□ -0.52
COL11A1-202ENST00000358392 USP17L17D6RBQ6 530 aa11.78□□□□□ -0.52
COL11A1-202ENST00000358392 USP17L19D6RCP7 530 aa11.78□□□□□ -0.52
COL11A1-202ENST00000358392 USP17L20D6RJB6 530 aa11.78□□□□□ -0.52
COL11A1-202ENST00000358392 TRIM66O15016 1216 aa11.78□□□□□ -0.52
COL11A1-202ENST00000358392 GRIK1P39086 918 aa11.78□□□□□ -0.52
COL11A1-202ENST00000358392 USP17L24Q0WX57 530 aa11.78□□□□□ -0.52
COL11A1-202ENST00000358392 USP17L6PQ6QN14 398 aa11.78□□□□□ -0.52
COL11A1-202ENST00000358392 PRPF39Q86UA1 669 aaKnown RBP11.78□□□□□ -0.52
COL11A1-202ENST00000358392 CDKL3Q8IVW4 592 aaPredicted RBP11.78□□□□□ -0.52
COL11A1-202ENST00000358392 URGCPQ8TCY9 931 aa11.78□□□□□ -0.52
COL11A1-202ENST00000358392 TASP1Q9H6P5 420 aa11.78□□□□□ -0.52
COL11A1-202ENST00000358392 ASAP1Q9ULH1 1129 aa11.78□□□□□ -0.52
COL11A1-202ENST00000358392 APRTP07741 180 aa11.78□□□□□ -0.52
COL11A1-202ENST00000358392 ALFQ53S48 1182 aa11.78□□□□□ -0.52
COL11A1-202ENST00000358392 SH3BP5LQ7L8J4 393 aa11.78□□□□□ -0.52
COL11A1-202ENST00000358392 XXYLT1Q8NBI6 393 aa11.78□□□□□ -0.52
COL11A1-202ENST00000358392 GPBP1L1Q9HC44 474 aaPredicted RBP11.78□□□□□ -0.52
COL11A1-202ENST00000358392 PNMA8BQ9ULN7 279 aaPredicted RBP11.78□□□□□ -0.52
COL11A1-202ENST00000358392 GTF2A1LQ9UNN4 478 aa11.78□□□□□ -0.52
COL11A1-202ENST00000358392 FARP1Q9Y4F1 1045 aaPredicted RBP11.78□□□□□ -0.52
COL11A1-202ENST00000358392 A0A1B0GW55 424 aa11.78□□□□□ -0.52
COL11A1-202ENST00000358392 PP2D1A8MPX8 630 aa11.78□□□□□ -0.52
COL11A1-202ENST00000358392 DUX4L2P0CJ85 424 aa11.78□□□□□ -0.52
COL11A1-202ENST00000358392 DUX4L3P0CJ86 424 aa11.78□□□□□ -0.52
COL11A1-202ENST00000358392 DUX4L4P0CJ87 422 aa11.78□□□□□ -0.52
COL11A1-202ENST00000358392 DUX4L5P0CJ88 424 aa11.78□□□□□ -0.52
COL11A1-202ENST00000358392 DUX4L6P0CJ89 424 aa11.78□□□□□ -0.52
COL11A1-202ENST00000358392 DUX4L7P0CJ90 424 aa11.78□□□□□ -0.52
COL11A1-202ENST00000358392 ITPRIPL1Q6GPH6 555 aa11.78□□□□□ -0.52
COL11A1-202ENST00000358392 SHCBP1LQ9BZQ2 653 aa11.78□□□□□ -0.52
COL11A1-202ENST00000358392 PIH1D3Q9NQM4 214 aaKnown RBP11.78□□□□□ -0.52
COL11A1-202ENST00000358392 CD274Q9NZQ7 290 aa11.78□□□□□ -0.52
COL11A1-202ENST00000358392 DUX4Q9UBX2 424 aa11.78□□□□□ -0.52
COL11A1-202ENST00000358392 NEDD4P46934 1319 aa11.77□□□□□ -0.52
COL11A1-202ENST00000358392 A8MXQ7 604 aa11.77□□□□□ -0.52
COL11A1-202ENST00000358392 TRIM49P0CI25 452 aa11.77□□□□□ -0.52
COL11A1-202ENST00000358392 TRIM49CP0CI26 452 aa11.77□□□□□ -0.52
COL11A1-202ENST00000358392 KLC1Q07866 573 aa11.77□□□□□ -0.52
COL11A1-202ENST00000358392 MTF1Q14872 753 aa11.77□□□□□ -0.52
COL11A1-202ENST00000358392 SLC30A9Q6PML9 568 aa11.77□□□□□ -0.52
COL11A1-202ENST00000358392 CCDC60Q8IWA6 550 aaPredicted RBP11.77□□□□□ -0.52
COL11A1-202ENST00000358392 DHX40Q8IX18 779 aaKnown RBP11.77□□□□□ -0.52
COL11A1-202ENST00000358392 CPA5Q8WXQ8 436 aa11.77□□□□□ -0.52
COL11A1-202ENST00000358392 EPN3Q9H201 632 aa11.77□□□□□ -0.52
COL11A1-202ENST00000358392 PI4KBQ9UBF8 816 aa11.77□□□□□ -0.52
COL11A1-202ENST00000358392 DTNAQ9Y4J8 743 aa11.77□□□□□ -0.52
COL11A1-202ENST00000358392 UBXN8O00124 270 aa11.77□□□□□ -0.52
COL11A1-202ENST00000358392 SMNDC1O75940 238 aaKnown RBP eCLIP11.77□□□□□ -0.52
COL11A1-202ENST00000358392 CSE1LP55060 971 aaKnown RBP11.77□□□□□ -0.52
COL11A1-202ENST00000358392 RAB14P61106 215 aa11.77□□□□□ -0.52
COL11A1-202ENST00000358392 SWSAP1Q6NVH7 229 aa11.77□□□□□ -0.52
COL11A1-202ENST00000358392 CHSY1Q86X52 802 aa11.77□□□□□ -0.52
COL11A1-202ENST00000358392 APPL2Q8NEU8 664 aa11.77□□□□□ -0.52
COL11A1-202ENST00000358392 POLR3FQ9H1D9 316 aaPredicted RBP11.77□□□□□ -0.52
COL11A1-202ENST00000358392 CARD9Q9H257 536 aa11.77□□□□□ -0.52
COL11A1-202ENST00000358392 DDX56Q9NY93 547 aaKnown RBP11.77□□□□□ -0.52
COL11A1-202ENST00000358392 DONSONQ9NYP3 566 aa11.77□□□□□ -0.52
COL11A1-202ENST00000358392 SOX13Q9UN79 622 aa11.77□□□□□ -0.52
COL11A1-202ENST00000358392 CDYLQ9Y232 598 aa11.77□□□□□ -0.52
COL11A1-202ENST00000358392 PKP3Q9Y446 797 aa11.77□□□□□ -0.52
COL11A1-202ENST00000358392 GPATCH8Q9UKJ3 1502 aaKnown RBP11.77□□□□□ -0.53
COL11A1-202ENST00000358392 FAM196BA6NMK8 535 aa11.77□□□□□ -0.53
COL11A1-202ENST00000358392 CPB1P15086 417 aa11.77□□□□□ -0.53
COL11A1-202ENST00000358392 SLC25A41Q8N5S1 370 aa11.77□□□□□ -0.53
COL11A1-202ENST00000358392 DNAJC7Q99615 494 aa11.77□□□□□ -0.53
COL11A1-202ENST00000358392 AKT1P31749 480 aa11.77□□□□□ -0.53
COL11A1-202ENST00000358392 TRIP10Q15642 601 aa11.77□□□□□ -0.53
COL11A1-202ENST00000358392 SUPT20HL1Q3ZLR7 823 aa11.77□□□□□ -0.53
COL11A1-202ENST00000358392 GLYCTKQ8IVS8 523 aa11.77□□□□□ -0.53
COL11A1-202ENST00000358392 RHOT1Q8IXI2 618 aa11.77□□□□□ -0.53
COL11A1-202ENST00000358392 NSMCE4AQ9NXX6 385 aa11.77□□□□□ -0.53
COL11A1-202ENST00000358392 SMARCAL1Q9NZC9 954 aa11.77□□□□□ -0.53
COL11A1-202ENST00000358392 BFARQ9NZS9 450 aa11.77□□□□□ -0.53
COL11A1-202ENST00000358392 GRID2IPA4D2P6 1211 aa11.77□□□□□ -0.53
COL11A1-202ENST00000358392 KIF1CO43896 1103 aaKnown RBP11.77□□□□□ -0.53
COL11A1-202ENST00000358392 CENPTQ96BT3 561 aa11.77□□□□□ -0.53
COL11A1-202ENST00000358392 RMDN3Q96TC7 470 aa11.77□□□□□ -0.53
COL11A1-202ENST00000358392 ARHGEF3Q9NR81 526 aa11.77□□□□□ -0.53
COL11A1-202ENST00000358392 ARL2BPQ9Y2Y0 163 aa11.77□□□□□ -0.53
COL11A1-202ENST00000358392 NPM3O75607 178 aaKnown RBP11.76□□□□□ -0.53
COL11A1-202ENST00000358392 CIAO1O76071 339 aa11.76□□□□□ -0.53
COL11A1-202ENST00000358392 GH2P01242 217 aa11.76□□□□□ -0.53
COL11A1-202ENST00000358392 DEFA1P59665 94 aa11.76□□□□□ -0.53
COL11A1-202ENST00000358392 DEFA3P59666 94 aa11.76□□□□□ -0.53
COL11A1-202ENST00000358392 PARVAQ9NVD7 372 aa11.76□□□□□ -0.53
COL11A1-202ENST00000358392 TARSL2A2RTX5 802 aaKnown RBP11.76□□□□□ -0.53
COL11A1-202ENST00000358392 C16orf96A6NNT2 1141 aa11.76□□□□□ -0.53
COL11A1-202ENST00000358392 EPB42P16452 691 aa11.76□□□□□ -0.53
COL11A1-202ENST00000358392 NUMBP49757 651 aa11.76□□□□□ -0.53
COL11A1-202ENST00000358392 TNFAIP2Q03169 654 aa11.76□□□□□ -0.53
COL11A1-202ENST00000358392 CAAP1Q9H8G2 361 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms