RNA–Protein interactions for RNA: ENST00000358170.6

CD46-205, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,371 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-205ENST00000358170 PIK3CAP42336 1068 aa8.84□□□□□ -0.99
CD46-205ENST00000358170 NSFP46459 744 aaKnown RBP8.84□□□□□ -0.99
CD46-205ENST00000358170 POLGP54098 1239 aaPredicted RBP8.84□□□□□ -0.99
CD46-205ENST00000358170 POU5F1Q01860 360 aaKnown RBP8.84□□□□□ -0.99
CD46-205ENST00000358170 ZBTB41Q5SVQ8 909 aa8.84□□□□□ -0.99
CD46-205ENST00000358170 WDR78Q5VTH9 848 aa8.84□□□□□ -0.99
CD46-205ENST00000358170 ZDHHC24Q6UX98 284 aa8.84□□□□□ -0.99
CD46-205ENST00000358170 IFT74Q96LB3 600 aa8.84□□□□□ -0.99
CD46-205ENST00000358170 PPP1R16BQ96T49 567 aa8.84□□□□□ -0.99
CD46-205ENST00000358170 SYT11Q9BT88 431 aa8.84□□□□□ -0.99
CD46-205ENST00000358170 POLR3FQ9H1D9 316 aaPredicted RBP8.84□□□□□ -0.99
CD46-205ENST00000358170 KCND2Q9NZV8 630 aa8.84□□□□□ -0.99
CD46-205ENST00000358170 MIF4GDA9UHW6 222 aaKnown RBP8.84□□□□□ -0.99
CD46-205ENST00000358170 NPM3O75607 178 aaKnown RBP8.84□□□□□ -0.99
CD46-205ENST00000358170 IFNB1P01574 187 aa8.84□□□□□ -0.99
CD46-205ENST00000358170 KRT10P13645 584 aa8.84□□□□□ -0.99
CD46-205ENST00000358170 ANXA13P27216 316 aa8.84□□□□□ -0.99
CD46-205ENST00000358170 HSD17B4P51659 736 aa8.84□□□□□ -0.99
CD46-205ENST00000358170 GTF2BQ00403 316 aa8.84□□□□□ -0.99
CD46-205ENST00000358170 PCNX4Q63HM2 1172 aa8.84□□□□□ -0.99
CD46-205ENST00000358170 CIAPIN1Q6FI81 312 aa8.84□□□□□ -0.99
CD46-205ENST00000358170 SCARA5Q6ZMJ2 495 aa8.84□□□□□ -0.99
CD46-205ENST00000358170 FAM71AQ8IYT1 594 aa8.84□□□□□ -0.99
CD46-205ENST00000358170 GPATCH11Q8N954 259 aa8.84□□□□□ -0.99
CD46-205ENST00000358170 WRNIP1Q96S55 665 aa8.84□□□□□ -0.99
CD46-205ENST00000358170 TARS2Q9BW92 718 aaKnown RBP8.84□□□□□ -0.99
CD46-205ENST00000358170 PXMP2Q9NR77 195 aa8.84□□□□□ -0.99
CD46-205ENST00000358170 SLC12A6Q9UHW9 1150 aa8.84□□□□□ -0.99
CD46-205ENST00000358170 NOCTQ9UK39 431 aaKnown RBP8.84□□□□□ -0.99
CD46-205ENST00000358170 UBIAD1Q9Y5Z9 338 aa8.84□□□□□ -0.99
CD46-205ENST00000358170 PASKQ96RG2 1323 aa8.84□□□□□ -0.99
CD46-205ENST00000358170 CHKAP35790 457 aa8.84□□□□□ -0.99
CD46-205ENST00000358170 WNT7BP56706 349 aa8.84□□□□□ -0.99
CD46-205ENST00000358170 NLRP11P59045 1033 aaKnown RBP8.84□□□□□ -0.99
CD46-205ENST00000358170 FKBP1AP62942 108 aaKnown RBP8.84□□□□□ -0.99
CD46-205ENST00000358170 CDR2Q01850 454 aa8.84□□□□□ -0.99
CD46-205ENST00000358170 BRDTQ58F21 947 aaPredicted RBP8.84□□□□□ -0.99
CD46-205ENST00000358170 SLC9A9Q8IVB4 645 aa8.84□□□□□ -0.99
CD46-205ENST00000358170 CCDC60Q8IWA6 550 aaPredicted RBP8.84□□□□□ -0.99
CD46-205ENST00000358170 RTKN2Q8IZC4 609 aa8.84□□□□□ -0.99
CD46-205ENST00000358170 IPO4Q8TEX9 1081 aaKnown RBP8.84□□□□□ -0.99
CD46-205ENST00000358170 XPO6Q96QU8 1125 aaKnown RBP8.84□□□□□ -0.99
CD46-205ENST00000358170 DEFB129Q9H1M3 183 aa8.84□□□□□ -0.99
CD46-205ENST00000358170 ZDHHC18Q9NUE0 388 aa8.84□□□□□ -0.99
CD46-205ENST00000358170 HAUS2Q9NVX0 235 aa8.84□□□□□ -0.99
CD46-205ENST00000358170 GRHL1Q9NZI5 618 aa8.84□□□□□ -0.99
CD46-205ENST00000358170 R3HDM2Q9Y2K5 976 aaKnown RBP8.84□□□□□ -0.99
CD46-205ENST00000358170 A6NNZ2 444 aa8.83□□□□□ -1
CD46-205ENST00000358170 THAP12O43422 761 aa8.83□□□□□ -1
CD46-205ENST00000358170 TRAPPC3O43617 180 aa8.83□□□□□ -1
CD46-205ENST00000358170 RALAP11233 206 aa8.83□□□□□ -1
CD46-205ENST00000358170 PEX5P50542 639 aa8.83□□□□□ -1
CD46-205ENST00000358170 DYNLT1P63172 113 aa8.83□□□□□ -1
CD46-205ENST00000358170 PRKCEQ02156 737 aa8.83□□□□□ -1
CD46-205ENST00000358170 E2F5Q15329 346 aa8.83□□□□□ -1
CD46-205ENST00000358170 TUBB8Q3ZCM7 444 aa8.83□□□□□ -1
CD46-205ENST00000358170 SYCP2LQ5T4T6 812 aa8.83□□□□□ -1
CD46-205ENST00000358170 SLC39A4Q6P5W5 647 aa8.83□□□□□ -1
CD46-205ENST00000358170 MMS22LQ6ZRQ5 1243 aa8.83□□□□□ -1
CD46-205ENST00000358170 PNMA8AQ86V59 439 aaPredicted RBP8.83□□□□□ -1
CD46-205ENST00000358170 LRRC34Q8IZ02 419 aa8.83□□□□□ -1
CD46-205ENST00000358170 HELQQ8TDG4 1101 aa8.83□□□□□ -1
CD46-205ENST00000358170 JPH2Q9BR39 696 aaPredicted RBP8.83□□□□□ -1
CD46-205ENST00000358170 HERPUD2Q9BSE4 406 aa8.83□□□□□ -1
CD46-205ENST00000358170 MOV10L1Q9BXT6 1211 aaKnown RBP8.83□□□□□ -1
CD46-205ENST00000358170 C10orf88Q9H8K7 445 aa8.83□□□□□ -1
CD46-205ENST00000358170 SLC38A10Q9HBR0 1119 aa8.83□□□□□ -1
CD46-205ENST00000358170 CD248Q9HCU0 757 aa8.83□□□□□ -1
CD46-205ENST00000358170 FAM187AA6NFU0 413 aa8.83□□□□□ -1
CD46-205ENST00000358170 GOLGA8SH3BPF8 625 aa8.83□□□□□ -1
CD46-205ENST00000358170 GOLGA8MH3BSY2 632 aa8.83□□□□□ -1
CD46-205ENST00000358170 WDR46O15213 610 aaKnown RBP8.83□□□□□ -1
CD46-205ENST00000358170 PPFIA2O75334 1257 aa8.83□□□□□ -1
CD46-205ENST00000358170 SRGAP2CP0DJJ0 459 aa8.83□□□□□ -1
CD46-205ENST00000358170 PTGIRP43119 386 aa8.83□□□□□ -1
CD46-205ENST00000358170 FSTL1Q12841 308 aa8.83□□□□□ -1
CD46-205ENST00000358170 STRN3Q13033 797 aa8.83□□□□□ -1
CD46-205ENST00000358170 DHX34Q14147 1143 aaKnown RBP8.83□□□□□ -1
CD46-205ENST00000358170 B3GNT9Q6UX72 402 aa8.83□□□□□ -1
CD46-205ENST00000358170 ZNF365Q70YC5 407 aa8.83□□□□□ -1
CD46-205ENST00000358170 CCDC13Q8IYE1 715 aa8.83□□□□□ -1
CD46-205ENST00000358170 SHC3Q92529 594 aa8.83□□□□□ -1
CD46-205ENST00000358170 IWS1Q96ST2 819 aa8.83□□□□□ -1
CD46-205ENST00000358170 WNT8AQ9H1J5 351 aa8.83□□□□□ -1
CD46-205ENST00000358170 TMEM8AQ9HCN3 771 aa8.83□□□□□ -1
CD46-205ENST00000358170 PICK1Q9NRD5 415 aa8.83□□□□□ -1
CD46-205ENST00000358170 ADAM22Q9P0K1 906 aa8.83□□□□□ -1
CD46-205ENST00000358170 RPTORQ8N122 1335 aa8.83□□□□□ -1
CD46-205ENST00000358170 HLA-DRAP01903 254 aa8.82□□□□□ -1
CD46-205ENST00000358170 KRT76Q01546 638 aa8.82□□□□□ -1
CD46-205ENST00000358170 CYP24A1Q07973 514 aa8.82□□□□□ -1
CD46-205ENST00000358170 ORC1Q13415 861 aa8.82□□□□□ -1
CD46-205ENST00000358170 ICE2Q659A1 982 aa8.82□□□□□ -1
CD46-205ENST00000358170 ACAD10Q6JQN1 1059 aa8.82□□□□□ -1
CD46-205ENST00000358170 C4orf19Q8IY42 314 aa8.82□□□□□ -1
CD46-205ENST00000358170 GPD1LQ8N335 351 aa8.82□□□□□ -1
CD46-205ENST00000358170 DEPTORQ8TB45 409 aa8.82□□□□□ -1
CD46-205ENST00000358170 CHMP6Q96FZ7 201 aa8.82□□□□□ -1
CD46-205ENST00000358170 GMLQ99445 158 aa8.82□□□□□ -1
CD46-205ENST00000358170 STRA6Q9BX79 667 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms