RNA–Protein interactions for RNA: ENST00000357980.8

TPM1-205, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-205ENST00000357980 WDR49Q8IV35 697 aa18.46■□□□□ 0.55
TPM1-205ENST00000357980 DESI2Q9BSY9 194 aa18.46■□□□□ 0.55
TPM1-205ENST00000357980 CELF4Q9BZC1 486 aaKnown RBP18.46■□□□□ 0.55
TPM1-205ENST00000357980 RAB20Q9NX57 234 aa18.46■□□□□ 0.55
TPM1-205ENST00000357980 PPP2R2CQ9Y2T4 447 aa18.46■□□□□ 0.55
TPM1-205ENST00000357980 MEFVO15553 781 aaPredicted RBP18.45■□□□□ 0.54
TPM1-205ENST00000357980 RPLP2P05387 115 aaKnown RBP18.45■□□□□ 0.54
TPM1-205ENST00000357980 PLEKP08567 350 aaPredicted RBP18.45■□□□□ 0.54
TPM1-205ENST00000357980 CLTAP09496 248 aa18.45■□□□□ 0.54
TPM1-205ENST00000357980 OSTNP61366 133 aa18.45■□□□□ 0.54
TPM1-205ENST00000357980 PTPN11Q06124 597 aaPredicted RBP18.45■□□□□ 0.54
TPM1-205ENST00000357980 RAPGEF1Q13905 1077 aa18.45■□□□□ 0.54
TPM1-205ENST00000357980 ARHGEF19Q8IW93 802 aa18.45■□□□□ 0.54
TPM1-205ENST00000357980 OR5B17Q8NGF7 314 aa18.45■□□□□ 0.54
TPM1-205ENST00000357980 PPP1R13BQ96KQ4 1090 aa18.45■□□□□ 0.54
TPM1-205ENST00000357980 SPAG5Q96R06 1193 aa18.45■□□□□ 0.54
TPM1-205ENST00000357980 ADPGKQ9BRR6 497 aa18.45■□□□□ 0.54
TPM1-205ENST00000357980 STK33Q9BYT3 514 aa18.45■□□□□ 0.54
TPM1-205ENST00000357980 GPR88Q9GZN0 384 aa18.45■□□□□ 0.54
TPM1-205ENST00000357980 NHEJ1Q9H9Q4 299 aaPredicted RBP18.45■□□□□ 0.54
TPM1-205ENST00000357980 TRMT1Q9NXH9 659 aaKnown RBP18.45■□□□□ 0.54
TPM1-205ENST00000357980 DNAJC12Q9UKB3 198 aa18.45■□□□□ 0.54
TPM1-205ENST00000357980 ADGRG1Q9Y653 693 aa18.45■□□□□ 0.54
TPM1-205ENST00000357980 F8VZ95 297 aa18.44■□□□□ 0.54
TPM1-205ENST00000357980 TULP1O00294 542 aaPredicted RBP18.44■□□□□ 0.54
TPM1-205ENST00000357980 B4GALT4O60513 344 aa18.44■□□□□ 0.54
TPM1-205ENST00000357980 NDUFA10O95299 355 aa18.44■□□□□ 0.54
TPM1-205ENST00000357980 STAG3L1P0CL83 205 aa18.44■□□□□ 0.54
TPM1-205ENST00000357980 CXCL8P10145 99 aa18.44■□□□□ 0.54
TPM1-205ENST00000357980 AXLP30530 894 aa18.44■□□□□ 0.54
TPM1-205ENST00000357980 CLCN1P35523 988 aa18.44■□□□□ 0.54
TPM1-205ENST00000357980 SURF1Q15526 300 aa18.44■□□□□ 0.54
TPM1-205ENST00000357980 PTGISQ16647 500 aa18.44■□□□□ 0.54
TPM1-205ENST00000357980 KYAT1Q16773 422 aa18.44■□□□□ 0.54
TPM1-205ENST00000357980 DCAF4L1Q3SXM0 396 aa18.44■□□□□ 0.54
TPM1-205ENST00000357980 NOTUMQ6P988 496 aa18.44■□□□□ 0.54
TPM1-205ENST00000357980 RSPH3Q86UC2 560 aa18.44■□□□□ 0.54
TPM1-205ENST00000357980 CCDC170Q8IYT3 715 aa18.44■□□□□ 0.54
TPM1-205ENST00000357980 DNAJC5GQ8N7S2 189 aa18.44■□□□□ 0.54
TPM1-205ENST00000357980 GLT1D1Q96MS3 346 aa18.44■□□□□ 0.54
TPM1-205ENST00000357980 UNC93B1Q9H1C4 597 aa18.44■□□□□ 0.54
TPM1-205ENST00000357980 PAK6Q9NQU5 681 aaPredicted RBP18.44■□□□□ 0.54
TPM1-205ENST00000357980 CDY2AQ9Y6F7 541 aa18.44■□□□□ 0.54
TPM1-205ENST00000357980 EPN1Q9Y6I3 576 aaPredicted RBP18.44■□□□□ 0.54
TPM1-205ENST00000357980 A0A1W2PQ45 241 aaPredicted RBP18.44■□□□□ 0.54
TPM1-205ENST00000357980 A0A1W2PQY0 241 aa18.44■□□□□ 0.54
TPM1-205ENST00000357980 VNN1O95497 513 aa18.44■□□□□ 0.54
TPM1-205ENST00000357980 AP3M2P53677 418 aa18.44■□□□□ 0.54
TPM1-205ENST00000357980 NCBP1Q09161 790 aaKnown RBP18.44■□□□□ 0.54
TPM1-205ENST00000357980 SLC27A1Q6PCB7 646 aa18.44■□□□□ 0.54
TPM1-205ENST00000357980 IRF2BP2Q7Z5L9 587 aa18.44■□□□□ 0.54
TPM1-205ENST00000357980 ARRDC4Q8NCT1 418 aa18.44■□□□□ 0.54
TPM1-205ENST00000357980 SENP6Q9GZR1 1112 aaPredicted RBP18.44■□□□□ 0.54
TPM1-205ENST00000357980 RPF1Q9H9Y2 349 aaKnown RBP18.44■□□□□ 0.54
TPM1-205ENST00000357980 TRPV2Q9Y5S1 764 aa18.44■□□□□ 0.54
TPM1-205ENST00000357980 ZC3H11AO75152 810 aaKnown RBP eCLIP18.43■□□□□ 0.54
TPM1-205ENST00000357980 IL18RAPO95256 599 aa18.43■□□□□ 0.54
TPM1-205ENST00000357980 CHRNA1P02708 482 aa18.43■□□□□ 0.54
TPM1-205ENST00000357980 SERPING1P05155 500 aa18.43■□□□□ 0.54
TPM1-205ENST00000357980 MGAT3Q09327 533 aa18.43■□□□□ 0.54
TPM1-205ENST00000357980 MAPK8IP2Q13387 824 aaPredicted RBP18.43■□□□□ 0.54
TPM1-205ENST00000357980 DRAP1Q14919 205 aaPredicted RBP18.43■□□□□ 0.54
TPM1-205ENST00000357980 GPIHBP1Q8IV16 184 aa18.43■□□□□ 0.54
TPM1-205ENST00000357980 REXO1L1PQ8IX06 675 aa18.43■□□□□ 0.54
TPM1-205ENST00000357980 EFCAB13Q8IY85 973 aa18.43■□□□□ 0.54
TPM1-205ENST00000357980 SLC43A3Q8NBI5 491 aa18.43■□□□□ 0.54
TPM1-205ENST00000357980 VTI1AQ96AJ9 217 aa18.43■□□□□ 0.54
TPM1-205ENST00000357980 PHF24Q9UPV7 400 aa18.43■□□□□ 0.54
TPM1-205ENST00000357980 TRIP11Q15643 1979 aa18.43■□□□□ 0.54
TPM1-205ENST00000357980 SSU72P8A0A1W2PR75 194 aa18.42■□□□□ 0.54
TPM1-205ENST00000357980 M0QZ92 97 aa18.42■□□□□ 0.54
TPM1-205ENST00000357980 CCP110O43303 1012 aa18.42■□□□□ 0.54
TPM1-205ENST00000357980 HLA-DRAP01903 254 aa18.42■□□□□ 0.54
TPM1-205ENST00000357980 CCDC175P0C221 793 aa18.42■□□□□ 0.54
TPM1-205ENST00000357980 GRM5P41594 1212 aa18.42■□□□□ 0.54
TPM1-205ENST00000357980 ASIC2Q16515 512 aa18.42■□□□□ 0.54
TPM1-205ENST00000357980 ASTE1Q2TB18 679 aaPredicted RBP18.42■□□□□ 0.54
TPM1-205ENST00000357980 SLC9C1Q4G0N8 1177 aa18.42■□□□□ 0.54
TPM1-205ENST00000357980 FAM228AQ86W67 206 aa18.42■□□□□ 0.54
TPM1-205ENST00000357980 ACRBPQ8NEB7 543 aa18.42■□□□□ 0.54
TPM1-205ENST00000357980 HELQQ8TDG4 1101 aa18.42■□□□□ 0.54
TPM1-205ENST00000357980 DHX38Q92620 1227 aaKnown RBP18.42■□□□□ 0.54
TPM1-205ENST00000357980 FAM212AQ96EL1 285 aa18.42■□□□□ 0.54
TPM1-205ENST00000357980 MTMR12Q9C0I1 747 aa18.42■□□□□ 0.54
TPM1-205ENST00000357980 UBE2TQ9NPD8 197 aaPredicted RBP18.42■□□□□ 0.54
TPM1-205ENST00000357980 TRMT13Q9NUP7 481 aaKnown RBP18.42■□□□□ 0.54
TPM1-205ENST00000357980 REXO2Q9Y3B8 237 aaKnown RBP18.42■□□□□ 0.54
TPM1-205ENST00000357980 ZSCAN12O43309 604 aa18.42■□□□□ 0.54
TPM1-205ENST00000357980 NPTXRO95502 500 aa18.42■□□□□ 0.54
TPM1-205ENST00000357980 PNMA6AP0CW24 399 aaPredicted RBP18.42■□□□□ 0.54
TPM1-205ENST00000357980 CYLC1P35663 651 aaPredicted RBP18.42■□□□□ 0.54
TPM1-205ENST00000357980 SOX5P35711 763 aa18.42■□□□□ 0.54
TPM1-205ENST00000357980 EIF4A3P38919 411 aaKnown RBP18.42■□□□□ 0.54
TPM1-205ENST00000357980 PRKCIP41743 596 aa18.42■□□□□ 0.54
TPM1-205ENST00000357980 PIK3CAP42336 1068 aa18.42■□□□□ 0.54
TPM1-205ENST00000357980 PTK7Q13308 1070 aa18.42■□□□□ 0.54
TPM1-205ENST00000357980 BIRC3Q13489 604 aa18.42■□□□□ 0.54
TPM1-205ENST00000357980 SLC10A6Q3KNW5 377 aa18.42■□□□□ 0.54
TPM1-205ENST00000357980 APBB1IPQ7Z5R6 666 aaPredicted RBP18.42■□□□□ 0.54
TPM1-205ENST00000357980 KREMEN1Q96MU8 473 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms