RNA–Protein interactions for RNA: ENST00000357811.7

COL13A1-202, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,991 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-202ENST00000357811 SIX1Q15475 284 aaPredicted RBP21.89■■□□□ 1.09
COL13A1-202ENST00000357811 PPP2R5EQ16537 467 aa21.89■■□□□ 1.09
COL13A1-202ENST00000357811 FAM129AQ9BZQ8 928 aa21.89■■□□□ 1.09
COL13A1-202ENST00000357811 NUDT17P0C025 328 aa21.88■■□□□ 1.09
COL13A1-202ENST00000357811 SMTNP53814 917 aa21.88■■□□□ 1.09
COL13A1-202ENST00000357811 PSMC5P62195 406 aa21.88■■□□□ 1.09
COL13A1-202ENST00000357811 RPS6KC1Q96S38 1066 aa21.88■■□□□ 1.09
COL13A1-202ENST00000357811 R3HDM2Q9Y2K5 976 aaKnown RBP21.88■■□□□ 1.09
COL13A1-202ENST00000357811 RBBP6Q7Z6E9 1792 aaKnown RBP21.88■■□□□ 1.09
COL13A1-202ENST00000357811 PODXLO00592 558 aa21.88■■□□□ 1.09
COL13A1-202ENST00000357811 ACOT2P49753 483 aa21.88■■□□□ 1.09
COL13A1-202ENST00000357811 CDR1P51861 262 aa21.88■■□□□ 1.09
COL13A1-202ENST00000357811 MTMR2Q13614 643 aa21.88■■□□□ 1.09
COL13A1-202ENST00000357811 SEZ6Q53EL9 994 aa21.88■■□□□ 1.09
COL13A1-202ENST00000357811 ANKRD20A8PQ5CZ79 823 aa21.88■■□□□ 1.09
COL13A1-202ENST00000357811 PCNX4Q63HM2 1172 aa21.88■■□□□ 1.09
COL13A1-202ENST00000357811 CDC42EP4Q9H3Q1 356 aaKnown RBP21.88■■□□□ 1.09
COL13A1-202ENST00000357811 SCP2P22307 547 aa21.87■■□□□ 1.09
COL13A1-202ENST00000357811 WNT7BP56706 349 aa21.87■■□□□ 1.09
COL13A1-202ENST00000357811 BAATQ14032 418 aaPredicted RBP21.87■■□□□ 1.09
COL13A1-202ENST00000357811 ZFYVE27Q5T4F4 411 aa21.87■■□□□ 1.09
COL13A1-202ENST00000357811 PASKQ96RG2 1323 aa21.87■■□□□ 1.09
COL13A1-202ENST00000357811 WNT10BO00744 389 aa21.87■■□□□ 1.09
COL13A1-202ENST00000357811 ZNF862O60290 1169 aa21.87■■□□□ 1.09
COL13A1-202ENST00000357811 GZMAP12544 262 aa21.87■■□□□ 1.09
COL13A1-202ENST00000357811 KYNUQ16719 465 aa21.87■■□□□ 1.09
COL13A1-202ENST00000357811 FAM133BQ5BKY9 247 aaKnown RBP21.87■■□□□ 1.09
COL13A1-202ENST00000357811 HP1BP3Q5SSJ5 553 aaPredicted RBP21.87■■□□□ 1.09
COL13A1-202ENST00000357811 PRAMEF18Q5VWM3 479 aa21.87■■□□□ 1.09
COL13A1-202ENST00000357811 SCARA3Q6AZY7 606 aa21.87■■□□□ 1.09
COL13A1-202ENST00000357811 SWSAP1Q6NVH7 229 aa21.87■■□□□ 1.09
COL13A1-202ENST00000357811 YTHDF3Q7Z739 585 aaKnown RBP21.87■■□□□ 1.09
COL13A1-202ENST00000357811 DYDC1Q8WWB3 177 aa21.87■■□□□ 1.09
COL13A1-202ENST00000357811 GTF3C4Q9UKN8 822 aa21.87■■□□□ 1.09
COL13A1-202ENST00000357811 HARSP12081 509 aaKnown RBP21.87■■□□□ 1.09
COL13A1-202ENST00000357811 AUHQ13825 339 aaKnown RBP21.87■■□□□ 1.09
COL13A1-202ENST00000357811 MYBPC2Q14324 1141 aa21.87■■□□□ 1.09
COL13A1-202ENST00000357811 GDAP1Q8TB36 358 aa21.87■■□□□ 1.09
COL13A1-202ENST00000357811 ATXN2LQ8WWM7 1075 aaKnown RBP21.87■■□□□ 1.09
COL13A1-202ENST00000357811 CEP89Q96ST8 783 aa21.87■■□□□ 1.09
COL13A1-202ENST00000357811 PDCD2LQ9BRP1 358 aa21.87■■□□□ 1.09
COL13A1-202ENST00000357811 PAGR1Q9BTK6 254 aa21.87■■□□□ 1.09
COL13A1-202ENST00000357811 ADAM33Q9BZ11 813 aa21.87■■□□□ 1.09
COL13A1-202ENST00000357811 KCNK9Q9NPC2 374 aa21.87■■□□□ 1.09
COL13A1-202ENST00000357811 KLC4Q9NSK0 619 aa21.87■■□□□ 1.09
COL13A1-202ENST00000357811 BRWD3Q6RI45 1802 aa21.86■■□□□ 1.09
COL13A1-202ENST00000357811 WDR64B1ANS9 1081 aa21.86■■□□□ 1.09
COL13A1-202ENST00000357811 P4HA2O15460 535 aa21.86■■□□□ 1.09
COL13A1-202ENST00000357811 CYP1A2P05177 515 aa21.86■■□□□ 1.09
COL13A1-202ENST00000357811 TNNI1P19237 187 aa21.86■■□□□ 1.09
COL13A1-202ENST00000357811 HADHBP55084 474 aaKnown RBP21.86■■□□□ 1.09
COL13A1-202ENST00000357811 DDX1Q92499 740 aaKnown RBP21.86■■□□□ 1.09
COL13A1-202ENST00000357811 HVCN1Q96D96 273 aa21.86■■□□□ 1.09
COL13A1-202ENST00000357811 TMEM8AQ9HCN3 771 aa21.86■■□□□ 1.09
COL13A1-202ENST00000357811 SCTRP47872 440 aa21.86■■□□□ 1.09
COL13A1-202ENST00000357811 NCKAP1LP55160 1127 aa21.86■■□□□ 1.09
COL13A1-202ENST00000357811 SCLT1Q96NL6 688 aa21.86■■□□□ 1.09
COL13A1-202ENST00000357811 C11orf70Q9BRQ4 267 aa21.86■■□□□ 1.09
COL13A1-202ENST00000357811 CNOT10Q9H9A5 744 aaKnown RBP21.86■■□□□ 1.09
COL13A1-202ENST00000357811 TBC1D22BQ9NU19 505 aa21.86■■□□□ 1.09
COL13A1-202ENST00000357811 SEPT9Q9UHD8 586 aaPredicted RBP21.86■■□□□ 1.09
COL13A1-202ENST00000357811 GRIN3BO60391 1043 aa21.85■■□□□ 1.09
COL13A1-202ENST00000357811 CHRM1P11229 460 aaPredicted RBP21.85■■□□□ 1.09
COL13A1-202ENST00000357811 MMP13P45452 471 aa21.85■■□□□ 1.09
COL13A1-202ENST00000357811 ZKSCAN8Q15776 578 aaPredicted RBP21.85■■□□□ 1.09
COL13A1-202ENST00000357811 ACAD10Q6JQN1 1059 aa21.85■■□□□ 1.09
COL13A1-202ENST00000357811 MCF2L2Q86YR7 1114 aa21.85■■□□□ 1.09
COL13A1-202ENST00000357811 ATG4CQ96DT6 458 aa21.85■■□□□ 1.09
COL13A1-202ENST00000357811 GMLQ99445 158 aa21.85■■□□□ 1.09
COL13A1-202ENST00000357811 TAOK3Q9H2K8 898 aa21.85■■□□□ 1.09
COL13A1-202ENST00000357811 PAEPP09466 180 aa21.85■■□□□ 1.09
COL13A1-202ENST00000357811 DRG2P55039 364 aaKnown RBP21.85■■□□□ 1.09
COL13A1-202ENST00000357811 ALCAMQ13740 583 aa21.85■■□□□ 1.09
COL13A1-202ENST00000357811 C4orf19Q8IY42 314 aa21.85■■□□□ 1.09
COL13A1-202ENST00000357811 FLAD1Q8NFF5 587 aa21.85■■□□□ 1.09
COL13A1-202ENST00000357811 ZNF317Q96PQ6 595 aaPredicted RBP21.85■■□□□ 1.09
COL13A1-202ENST00000357811 AAASQ9NRG9 546 aa21.85■■□□□ 1.09
COL13A1-202ENST00000357811 PSPC1Q8WXF1 523 aaKnown RBP21.84■■□□□ 1.09
COL13A1-202ENST00000357811 ZNF516Q92618 1163 aa21.84■■□□□ 1.09
COL13A1-202ENST00000357811 ART4Q93070 314 aa21.84■■□□□ 1.09
COL13A1-202ENST00000357811 PGM2Q96G03 612 aa21.84■■□□□ 1.09
COL13A1-202ENST00000357811 SYNPO2Q9UMS6 1093 aa21.84■■□□□ 1.09
COL13A1-202ENST00000357811 TP73O15350 636 aa21.84■■□□□ 1.09
COL13A1-202ENST00000357811 HSPA6P17066 643 aa21.84■■□□□ 1.09
COL13A1-202ENST00000357811 CD58P19256 250 aa21.84■■□□□ 1.09
COL13A1-202ENST00000357811 ADCY8P40145 1251 aa21.84■■□□□ 1.09
COL13A1-202ENST00000357811 CYP24A1Q07973 514 aa21.84■■□□□ 1.09
COL13A1-202ENST00000357811 C6orf118Q5T5N4 469 aa21.84■■□□□ 1.09
COL13A1-202ENST00000357811 CAPN12Q6ZSI9 719 aa21.84■■□□□ 1.09
COL13A1-202ENST00000357811 NLRX1Q86UT6 975 aa21.84■■□□□ 1.09
COL13A1-202ENST00000357811 EXOC3L1Q86VI1 746 aa21.84■■□□□ 1.09
COL13A1-202ENST00000357811 CEP57Q86XR8 500 aa21.84■■□□□ 1.09
COL13A1-202ENST00000357811 C12orf56Q8IXR9 622 aa21.84■■□□□ 1.09
COL13A1-202ENST00000357811 CCDC197Q8NCU1 140 aa21.84■■□□□ 1.09
COL13A1-202ENST00000357811 ZBTB45Q96K62 511 aaPredicted RBP21.84■■□□□ 1.09
COL13A1-202ENST00000357811 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.84■■□□□ 1.09
COL13A1-202ENST00000357811 EXOC7Q9UPT5 735 aa21.84■■□□□ 1.09
COL13A1-202ENST00000357811 RARGP13631 454 aa21.84■■□□□ 1.09
COL13A1-202ENST00000357811 ITGA8P53708 1063 aa21.84■■□□□ 1.09
COL13A1-202ENST00000357811 MTERF2Q49AM1 385 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms