RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 MIS18BP1Q6P0N0 1132 aa6.92□□□□□ -1.3
VPS13B-202ENST00000357162 MOXD1Q6UVY6 613 aa6.92□□□□□ -1.3
VPS13B-202ENST00000357162 ARMT1Q9H993 441 aa6.92□□□□□ -1.3
VPS13B-202ENST00000357162 TBC1D22BQ9NU19 505 aa6.92□□□□□ -1.3
VPS13B-202ENST00000357162 ZBTB24O43167 697 aaPredicted RBP6.92□□□□□ -1.3
VPS13B-202ENST00000357162 MYO1DO94832 1006 aa6.92□□□□□ -1.3
VPS13B-202ENST00000357162 NQO1P15559 274 aaKnown RBP6.92□□□□□ -1.3
VPS13B-202ENST00000357162 LUZP2Q86TE4 346 aa6.92□□□□□ -1.3
VPS13B-202ENST00000357162 SAMD3Q8N6K7 520 aa6.92□□□□□ -1.3
VPS13B-202ENST00000357162 GINS4Q9BRT9 223 aa6.92□□□□□ -1.3
VPS13B-202ENST00000357162 PLA2G12BQ9BX93 195 aa6.92□□□□□ -1.3
VPS13B-202ENST00000357162 KLHL4Q9C0H6 718 aa6.92□□□□□ -1.3
VPS13B-202ENST00000357162 SCN3BQ9NY72 215 aa6.92□□□□□ -1.3
VPS13B-202ENST00000357162 SERPINB13Q9UIV8 391 aa6.92□□□□□ -1.3
VPS13B-202ENST00000357162 RABGEF1Q9UJ41 708 aa6.92□□□□□ -1.3
VPS13B-202ENST00000357162 ZBTB12Q9Y330 459 aaPredicted RBP6.92□□□□□ -1.3
VPS13B-202ENST00000357162 TMEM2Q9UHN6 1383 aa6.92□□□□□ -1.3
VPS13B-202ENST00000357162 ZNF135P52742 658 aaPredicted RBP6.92□□□□□ -1.3
VPS13B-202ENST00000357162 LRRC8EQ6NSJ5 796 aa6.92□□□□□ -1.3
VPS13B-202ENST00000357162 SLC30A5Q8TAD4 765 aa6.92□□□□□ -1.3
VPS13B-202ENST00000357162 DEPDC1BQ8WUY9 529 aa6.92□□□□□ -1.3
VPS13B-202ENST00000357162 SLIT1O75093 1534 aa6.92□□□□□ -1.3
VPS13B-202ENST00000357162 C15orf38-AP3S2A0A0A6YYH1 394 aa6.92□□□□□ -1.3
VPS13B-202ENST00000357162 LOC102724159A0A0B4J2E5 919 aa6.92□□□□□ -1.3
VPS13B-202ENST00000357162 MOCS3O95396 460 aa6.92□□□□□ -1.3
VPS13B-202ENST00000357162 OATP04181 439 aa6.92□□□□□ -1.3
VPS13B-202ENST00000357162 PLA2G4BP0C869 781 aa6.92□□□□□ -1.3
VPS13B-202ENST00000357162 CPA1P15085 419 aa6.92□□□□□ -1.3
VPS13B-202ENST00000357162 ACAT1P24752 427 aaKnown RBP6.92□□□□□ -1.3
VPS13B-202ENST00000357162 PDAP1Q13442 181 aaKnown RBP6.92□□□□□ -1.3
VPS13B-202ENST00000357162 PWP2Q15269 919 aaKnown RBP6.92□□□□□ -1.3
VPS13B-202ENST00000357162 ARPINQ7Z6K5 226 aa6.92□□□□□ -1.3
VPS13B-202ENST00000357162 FBXO11Q86XK2 927 aa6.92□□□□□ -1.3
VPS13B-202ENST00000357162 UFL1O94874 794 aa6.92□□□□□ -1.3
VPS13B-202ENST00000357162 ABCB1P08183 1280 aaPredicted RBP6.92□□□□□ -1.3
VPS13B-202ENST00000357162 ALDH1B1P30837 517 aa6.92□□□□□ -1.3
VPS13B-202ENST00000357162 TUFT1Q9NNX1 390 aa6.92□□□□□ -1.3
VPS13B-202ENST00000357162 PCDHB4Q9Y5E5 795 aa6.92□□□□□ -1.3
VPS13B-202ENST00000357162 RHOBTB3O94955 611 aa6.92□□□□□ -1.3
VPS13B-202ENST00000357162 PREPLQ4J6C6 727 aaPredicted RBP6.92□□□□□ -1.3
VPS13B-202ENST00000357162 DNAAF3Q8N9W5 541 aa6.92□□□□□ -1.3
VPS13B-202ENST00000357162 SETD9Q8NE22 299 aa6.92□□□□□ -1.3
VPS13B-202ENST00000357162 GDAP1Q8TB36 358 aa6.92□□□□□ -1.3
VPS13B-202ENST00000357162 PI4K2BQ8TCG2 481 aa6.92□□□□□ -1.3
VPS13B-202ENST00000357162 GTF3C4Q9UKN8 822 aa6.92□□□□□ -1.3
VPS13B-202ENST00000357162 IVNS1ABPQ9Y6Y0 642 aa6.92□□□□□ -1.3
VPS13B-202ENST00000357162 USP6P35125 1406 aa6.92□□□□□ -1.3
VPS13B-202ENST00000357162 MFSD14BQ5SR56 506 aa6.92□□□□□ -1.3
VPS13B-202ENST00000357162 TTC27Q6P3X3 843 aa6.92□□□□□ -1.3
VPS13B-202ENST00000357162 RFX6Q8HWS3 928 aa6.92□□□□□ -1.3
VPS13B-202ENST00000357162 KIAA2013Q8IYS2 634 aa6.92□□□□□ -1.3
VPS13B-202ENST00000357162 SCFD2Q8WU76 684 aa6.92□□□□□ -1.3
VPS13B-202ENST00000357162 IL17RAQ96F46 866 aa6.92□□□□□ -1.3
VPS13B-202ENST00000357162 DACH2Q96NX9 599 aa6.92□□□□□ -1.3
VPS13B-202ENST00000357162 EPAS1Q99814 870 aa6.92□□□□□ -1.3
VPS13B-202ENST00000357162 C7orf25Q9BPX7 421 aa6.92□□□□□ -1.3
VPS13B-202ENST00000357162 BEGAINQ9BUH8 593 aa6.92□□□□□ -1.3
VPS13B-202ENST00000357162 PARVAQ9NVD7 372 aa6.92□□□□□ -1.3
VPS13B-202ENST00000357162 PTPN22Q9Y2R2 807 aa6.92□□□□□ -1.3
VPS13B-202ENST00000357162 NCKAP5LQ9HCH0 1330 aa6.92□□□□□ -1.3
VPS13B-202ENST00000357162 TTC26A0AVF1 554 aa6.91□□□□□ -1.3
VPS13B-202ENST00000357162 IFNA14P01570 189 aa6.91□□□□□ -1.3
VPS13B-202ENST00000357162 GCP02774 474 aa6.91□□□□□ -1.3
VPS13B-202ENST00000357162 PSAPP07602 524 aa6.91□□□□□ -1.3
VPS13B-202ENST00000357162 STAT3P40763 770 aa6.91□□□□□ -1.3
VPS13B-202ENST00000357162 SCTRP47872 440 aa6.91□□□□□ -1.3
VPS13B-202ENST00000357162 PDK1Q15118 436 aa6.91□□□□□ -1.3
VPS13B-202ENST00000357162 SLC45A4Q5BKX6 768 aa6.91□□□□□ -1.3
VPS13B-202ENST00000357162 NLRP9Q7RTR0 991 aa6.91□□□□□ -1.3
VPS13B-202ENST00000357162 B4GALNT2Q8NHY0 566 aa6.91□□□□□ -1.3
VPS13B-202ENST00000357162 KCNB2Q92953 911 aa6.91□□□□□ -1.3
VPS13B-202ENST00000357162 SAYSD1Q9NPB0 183 aa6.91□□□□□ -1.3
VPS13B-202ENST00000357162 XDHP47989 1333 aa6.91□□□□□ -1.3
VPS13B-202ENST00000357162 KYNUQ16719 465 aa6.91□□□□□ -1.3
VPS13B-202ENST00000357162 RFX4Q33E94 735 aa6.91□□□□□ -1.3
VPS13B-202ENST00000357162 CENPPQ6IPU0 288 aa6.91□□□□□ -1.3
VPS13B-202ENST00000357162 ANKS1AQ92625 1134 aa6.91□□□□□ -1.3
VPS13B-202ENST00000357162 ACAP3Q96P50 834 aa6.91□□□□□ -1.3
VPS13B-202ENST00000357162 CACNA2D2Q9NY47 1150 aa6.91□□□□□ -1.3
VPS13B-202ENST00000357162 TTC7AQ9ULT0 858 aaPredicted RBP6.91□□□□□ -1.3
VPS13B-202ENST00000357162 USTQ9Y2C2 406 aa6.91□□□□□ -1.3
VPS13B-202ENST00000357162 MMP14P50281 582 aa6.91□□□□□ -1.3
VPS13B-202ENST00000357162 GOLGA8FQ08AF8 430 aa6.91□□□□□ -1.3
VPS13B-202ENST00000357162 GOLGA8DPQ0D2H9 430 aa6.91□□□□□ -1.3
VPS13B-202ENST00000357162 ARHGAP44Q17R89 818 aa6.91□□□□□ -1.3
VPS13B-202ENST00000357162 TTC33Q6PID6 262 aaPredicted RBP6.91□□□□□ -1.3
VPS13B-202ENST00000357162 SEPT8Q92599 483 aa6.91□□□□□ -1.3
VPS13B-202ENST00000357162 RBM15Q96T37 977 aaKnown RBP eCLIP6.91□□□□□ -1.3
VPS13B-202ENST00000357162 GRID1Q9ULK0 1009 aa6.91□□□□□ -1.3
VPS13B-202ENST00000357162 CAB39Q9Y376 341 aaPredicted RBP6.91□□□□□ -1.3
VPS13B-202ENST00000357162 DDR1Q08345 913 aa6.91□□□□□ -1.3
VPS13B-202ENST00000357162 BFSP2Q13515 415 aa6.91□□□□□ -1.3
VPS13B-202ENST00000357162 DDB1Q16531 1140 aa6.91□□□□□ -1.3
VPS13B-202ENST00000357162 XKR9Q5GH70 373 aa6.91□□□□□ -1.3
VPS13B-202ENST00000357162 FKBP9P1Q75LS8 142 aa6.91□□□□□ -1.3
VPS13B-202ENST00000357162 PIGOQ8TEQ8 1089 aa6.91□□□□□ -1.3
VPS13B-202ENST00000357162 RASSF5Q8WWW0 418 aa6.91□□□□□ -1.3
VPS13B-202ENST00000357162 TOPORSQ9NS56 1045 aaPredicted RBP6.91□□□□□ -1.3
VPS13B-202ENST00000357162 EVPLLA8MZ36 301 aa6.91□□□□□ -1.3
VPS13B-202ENST00000357162 MAP2K7O14733 419 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms