RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 C9orf72Q96LT7 481 aa15.66■□□□□ 0.1
CHD4-201ENST00000357008 COG4Q9H9E3 785 aa15.66■□□□□ 0.1
CHD4-201ENST00000357008 ZNF212Q9UDV6 495 aa15.66■□□□□ 0.1
CHD4-201ENST00000357008 MTO1Q9Y2Z2 717 aaKnown RBP15.66■□□□□ 0.1
CHD4-201ENST00000357008 NEU2Q9Y3R4 380 aa15.66■□□□□ 0.1
CHD4-201ENST00000357008 MRPS35P82673 323 aaKnown RBP15.66■□□□□ 0.1
CHD4-201ENST00000357008 SWSAP1Q6NVH7 229 aa15.66■□□□□ 0.1
CHD4-201ENST00000357008 DDIASQ8IXT1 998 aa15.66■□□□□ 0.1
CHD4-201ENST00000357008 HPS3Q969F9 1004 aa15.66■□□□□ 0.1
CHD4-201ENST00000357008 RAVER2Q9HCJ3 691 aaKnown RBP15.66■□□□□ 0.1
CHD4-201ENST00000357008 F5H423 210 aaPredicted RBP15.66■□□□□ 0.1
CHD4-201ENST00000357008 F5H6K3 240 aa15.66■□□□□ 0.1
CHD4-201ENST00000357008 H0Y626 953 aa15.66■□□□□ 0.1
CHD4-201ENST00000357008 TRIM16O95361 564 aa15.66■□□□□ 0.1
CHD4-201ENST00000357008 KLRC3Q07444 240 aa15.66■□□□□ 0.1
CHD4-201ENST00000357008 PID1Q7Z2X4 250 aa15.66■□□□□ 0.1
CHD4-201ENST00000357008 ZNF710Q8N1W2 664 aa15.66■□□□□ 0.1
CHD4-201ENST00000357008 ISCA1Q9BUE6 129 aa15.66■□□□□ 0.1
CHD4-201ENST00000357008 SLC40A1Q9NP59 571 aa15.66■□□□□ 0.1
CHD4-201ENST00000357008 KIAA0391O15091 583 aaKnown RBP15.65■□□□□ 0.1
CHD4-201ENST00000357008 SERPINB9P50453 376 aa15.65■□□□□ 0.1
CHD4-201ENST00000357008 CACNB3P54284 484 aa15.65■□□□□ 0.1
CHD4-201ENST00000357008 POTEAQ6S8J7 498 aa15.65■□□□□ 0.1
CHD4-201ENST00000357008 USP38Q8NB14 1042 aa15.65■□□□□ 0.1
CHD4-201ENST00000357008 AURKCQ9UQB9 309 aa15.65■□□□□ 0.1
CHD4-201ENST00000357008 TMEM120BA0PK00 339 aa15.65■□□□□ 0.1
CHD4-201ENST00000357008 E5RI56 91 aa15.65■□□□□ 0.1
CHD4-201ENST00000357008 NMT1P30419 496 aaKnown RBP15.65■□□□□ 0.1
CHD4-201ENST00000357008 SEC24CP53992 1094 aa15.65■□□□□ 0.1
CHD4-201ENST00000357008 DAB2IPQ5VWQ8 1189 aa15.65■□□□□ 0.1
CHD4-201ENST00000357008 KIRREL3Q8IZU9 778 aa15.65■□□□□ 0.1
CHD4-201ENST00000357008 AGR3Q8TD06 166 aa15.65■□□□□ 0.1
CHD4-201ENST00000357008 SLC26A4O43511 780 aa15.65■□□□□ 0.1
CHD4-201ENST00000357008 KLHL2O95198 593 aa15.65■□□□□ 0.1
CHD4-201ENST00000357008 EDRF1Q3B7T1 1238 aa15.65■□□□□ 0.1
CHD4-201ENST00000357008 ELOA2Q8IYF1 753 aaPredicted RBP15.65■□□□□ 0.1
CHD4-201ENST00000357008 C4orf33Q8N1A6 199 aa15.65■□□□□ 0.1
CHD4-201ENST00000357008 OR6P1Q8NGX9 317 aa15.65■□□□□ 0.1
CHD4-201ENST00000357008 BEGAINQ9BUH8 593 aa15.65■□□□□ 0.1
CHD4-201ENST00000357008 REREQ9P2R6 1566 aa15.65■□□□□ 0.1
CHD4-201ENST00000357008 BNIP3LO60238 219 aa15.65■□□□□ 0.1
CHD4-201ENST00000357008 KDM1AO60341 852 aa15.65■□□□□ 0.1
CHD4-201ENST00000357008 DEAF1O75398 565 aaPredicted RBP15.65■□□□□ 0.1
CHD4-201ENST00000357008 ABCE1P61221 599 aaKnown RBP15.65■□□□□ 0.1
CHD4-201ENST00000357008 FOXO4P98177 505 aa15.65■□□□□ 0.1
CHD4-201ENST00000357008 RNF135Q8IUD6 432 aa15.65■□□□□ 0.1
CHD4-201ENST00000357008 RIBC1Q8N443 379 aaPredicted RBP15.65■□□□□ 0.1
CHD4-201ENST00000357008 TIPINQ9BVW5 301 aa15.65■□□□□ 0.1
CHD4-201ENST00000357008 LMCD1Q9NZU5 365 aa15.65■□□□□ 0.1
CHD4-201ENST00000357008 ENO4A6NNW6 628 aa15.65■□□□□ 0.1
CHD4-201ENST00000357008 FMO5P49326 533 aa15.65■□□□□ 0.1
CHD4-201ENST00000357008 TBCCQ15814 346 aa15.65■□□□□ 0.1
CHD4-201ENST00000357008 CATSPER3Q86XQ3 398 aa15.65■□□□□ 0.1
CHD4-201ENST00000357008 IGDCC4Q8TDY8 1250 aa15.65■□□□□ 0.1
CHD4-201ENST00000357008 ERP44Q9BS26 406 aa15.65■□□□□ 0.1
CHD4-201ENST00000357008 CCDC134Q9H6E4 229 aa15.65■□□□□ 0.1
CHD4-201ENST00000357008 L2HGDHQ9H9P8 463 aa15.65■□□□□ 0.1
CHD4-201ENST00000357008 CFAP74Q9C0B2 1584 aa15.65■□□□□ 0.1
CHD4-201ENST00000357008 MAP3K10Q02779 954 aa15.64■□□□□ 0.09
CHD4-201ENST00000357008 STK4Q13043 487 aa15.64■□□□□ 0.09
CHD4-201ENST00000357008 ZC3H12BQ5HYM0 836 aaKnown RBP15.64■□□□□ 0.09
CHD4-201ENST00000357008 FAM217BQ9NTX9 383 aaPredicted RBP15.64■□□□□ 0.09
CHD4-201ENST00000357008 HOXC10Q9NYD6 342 aa15.64■□□□□ 0.09
CHD4-201ENST00000357008 ESRRBO95718 433 aa15.64■□□□□ 0.09
CHD4-201ENST00000357008 SENP7Q9BQF6 1050 aa15.64■□□□□ 0.09
CHD4-201ENST00000357008 AP3B1O00203 1094 aa15.64■□□□□ 0.09
CHD4-201ENST00000357008 ANGPT2O15123 496 aa15.64■□□□□ 0.09
CHD4-201ENST00000357008 HNRNPH1P31943 449 aaKnown RBP15.64■□□□□ 0.09
CHD4-201ENST00000357008 KCNQ4P56696 695 aa15.64■□□□□ 0.09
CHD4-201ENST00000357008 LBRQ14739 615 aaKnown RBP15.64■□□□□ 0.09
CHD4-201ENST00000357008 CEP55Q53EZ4 464 aa15.64■□□□□ 0.09
CHD4-201ENST00000357008 CCDC92Q53HC0 331 aaPredicted RBP15.64■□□□□ 0.09
CHD4-201ENST00000357008 DAB1O75553 588 aa15.64■□□□□ 0.09
CHD4-201ENST00000357008 TRPC1P48995 793 aa15.64■□□□□ 0.09
CHD4-201ENST00000357008 NFX1Q12986 1120 aaKnown RBP15.64■□□□□ 0.09
CHD4-201ENST00000357008 SCARF1Q14162 830 aa15.64■□□□□ 0.09
CHD4-201ENST00000357008 MDH1BQ5I0G3 518 aa15.64■□□□□ 0.09
CHD4-201ENST00000357008 LRRC8BQ6P9F7 803 aa15.64■□□□□ 0.09
CHD4-201ENST00000357008 CMTM5Q96DZ9 223 aa15.64■□□□□ 0.09
CHD4-201ENST00000357008 WDR35Q9P2L0 1181 aa15.64■□□□□ 0.09
CHD4-201ENST00000357008 ZC3H7BQ9UGR2 993 aaKnown RBP15.64■□□□□ 0.09
CHD4-201ENST00000357008 ZNF229Q9UJW7 825 aa15.64■□□□□ 0.09
CHD4-201ENST00000357008 PDS5AQ29RF7 1337 aaKnown RBP15.64■□□□□ 0.09
CHD4-201ENST00000357008 ZBTB22O15209 634 aa15.64■□□□□ 0.09
CHD4-201ENST00000357008 TMEM253P0C7T8 217 aa15.64■□□□□ 0.09
CHD4-201ENST00000357008 ZNF200P98182 395 aaPredicted RBP15.64■□□□□ 0.09
CHD4-201ENST00000357008 MRGBPQ9NV56 204 aa15.64■□□□□ 0.09
CHD4-201ENST00000357008 FAM205CA6NFA0 338 aa15.63■□□□□ 0.09
CHD4-201ENST00000357008 C16orf96A6NNT2 1141 aa15.63■□□□□ 0.09
CHD4-201ENST00000357008 KCNN4O15554 427 aa15.63■□□□□ 0.09
CHD4-201ENST00000357008 SPAG6O75602 509 aa15.63■□□□□ 0.09
CHD4-201ENST00000357008 MAP4P27816 1152 aaKnown RBP15.63■□□□□ 0.09
CHD4-201ENST00000357008 TSPY1Q01534 308 aa15.63■□□□□ 0.09
CHD4-201ENST00000357008 RABL6Q3YEC7 729 aaPredicted RBP15.63■□□□□ 0.09
CHD4-201ENST00000357008 SYNE4Q8N205 404 aa15.63■□□□□ 0.09
CHD4-201ENST00000357008 TMCO5AQ8N6Q1 288 aa15.63■□□□□ 0.09
CHD4-201ENST00000357008 C3orf20Q8ND61 904 aa15.63■□□□□ 0.09
CHD4-201ENST00000357008 ANKS1AQ92625 1134 aa15.63■□□□□ 0.09
CHD4-201ENST00000357008 SARS2Q9NP81 518 aaKnown RBP15.63■□□□□ 0.09
CHD4-201ENST00000357008 RNF146Q9NTX7 359 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms