RNA–Protein interactions for RNA: ENST00000356948.10

PTBP1-203, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTBP1, Length 3,598 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-203ENST00000356948 ACOT2P49753 483 aa16.33■□□□□ 0.2
PTBP1-203ENST00000356948 PGM5Q15124 567 aa16.33■□□□□ 0.2
PTBP1-203ENST00000356948 RNF207Q6ZRF8 634 aa16.33■□□□□ 0.2
PTBP1-203ENST00000356948 RHOT2Q8IXI1 618 aa16.33■□□□□ 0.2
PTBP1-203ENST00000356948 ZBTB45Q96K62 511 aaPredicted RBP16.33■□□□□ 0.2
PTBP1-203ENST00000356948 RMDN3Q96TC7 470 aa16.33■□□□□ 0.2
PTBP1-203ENST00000356948 ANAPC7Q9UJX3 599 aa16.33■□□□□ 0.2
PTBP1-203ENST00000356948 WNT10BO00744 389 aa16.32■□□□□ 0.2
PTBP1-203ENST00000356948 CHUKO15111 745 aa16.32■□□□□ 0.2
PTBP1-203ENST00000356948 RIPK2O43353 540 aa16.32■□□□□ 0.2
PTBP1-203ENST00000356948 FSTL1Q12841 308 aa16.32■□□□□ 0.2
PTBP1-203ENST00000356948 MTMR3Q13615 1198 aa16.32■□□□□ 0.2
PTBP1-203ENST00000356948 SPDYE2Q495Y8 402 aa16.32■□□□□ 0.2
PTBP1-203ENST00000356948 ERMARDQ5T6L9 678 aa16.32■□□□□ 0.2
PTBP1-203ENST00000356948 AGBL2Q5U5Z8 902 aa16.32■□□□□ 0.2
PTBP1-203ENST00000356948 CYP4X1Q8N118 509 aa16.32■□□□□ 0.2
PTBP1-203ENST00000356948 OGFOD1Q8N543 542 aa16.32■□□□□ 0.2
PTBP1-203ENST00000356948 GMLQ99445 158 aa16.32■□□□□ 0.2
PTBP1-203ENST00000356948 ELAC2Q9BQ52 826 aaKnown RBP16.32■□□□□ 0.2
PTBP1-203ENST00000356948 CETPP11597 493 aa16.32■□□□□ 0.2
PTBP1-203ENST00000356948 ANXA13P27216 316 aa16.32■□□□□ 0.2
PTBP1-203ENST00000356948 UBL4BQ8N7F7 174 aa16.32■□□□□ 0.2
PTBP1-203ENST00000356948 SHC3Q92529 594 aa16.32■□□□□ 0.2
PTBP1-203ENST00000356948 SLC40A1Q9NP59 571 aa16.32■□□□□ 0.2
PTBP1-203ENST00000356948 UBIAD1Q9Y5Z9 338 aa16.32■□□□□ 0.2
PTBP1-203ENST00000356948 RGS16O15492 202 aaPredicted RBP16.32■□□□□ 0.2
PTBP1-203ENST00000356948 FSBPO95073 299 aa16.32■□□□□ 0.2
PTBP1-203ENST00000356948 MYBL1P10243 752 aa16.32■□□□□ 0.2
PTBP1-203ENST00000356948 MTMR2Q13614 643 aa16.32■□□□□ 0.2
PTBP1-203ENST00000356948 MPP2Q14168 576 aa16.32■□□□□ 0.2
PTBP1-203ENST00000356948 GLIS1Q8NBF1 620 aa16.32■□□□□ 0.2
PTBP1-203ENST00000356948 THOC1Q96FV9 657 aaKnown RBP16.32■□□□□ 0.2
PTBP1-203ENST00000356948 ZNF317Q96PQ6 595 aaPredicted RBP16.32■□□□□ 0.2
PTBP1-203ENST00000356948 AUHQ13825 339 aaKnown RBP16.31■□□□□ 0.2
PTBP1-203ENST00000356948 KYNUQ16719 465 aa16.31■□□□□ 0.2
PTBP1-203ENST00000356948 ANKRD20A8PQ5CZ79 823 aa16.31■□□□□ 0.2
PTBP1-203ENST00000356948 ARFGAP2Q8N6H7 521 aa16.31■□□□□ 0.2
PTBP1-203ENST00000356948 EIF1ADQ8N9N8 165 aaKnown RBP16.31■□□□□ 0.2
PTBP1-203ENST00000356948 C1orf131Q8NDD1 294 aaKnown RBP16.31■□□□□ 0.2
PTBP1-203ENST00000356948 PSPC1Q8WXF1 523 aaKnown RBP16.31■□□□□ 0.2
PTBP1-203ENST00000356948 KLC4Q9NSK0 619 aa16.31■□□□□ 0.2
PTBP1-203ENST00000356948 GABBR1Q9UBS5 961 aa16.31■□□□□ 0.2
PTBP1-203ENST00000356948 STK24Q9Y6E0 443 aa16.31■□□□□ 0.2
PTBP1-203ENST00000356948 DOCK5Q9H7D0 1870 aa16.31■□□□□ 0.2
PTBP1-203ENST00000356948 UMODL1Q5DID0 1318 aa16.31■□□□□ 0.2
PTBP1-203ENST00000356948 ENO4A6NNW6 628 aa16.31■□□□□ 0.2
PTBP1-203ENST00000356948 CLTAP09496 248 aa16.31■□□□□ 0.2
PTBP1-203ENST00000356948 FKBP1AP62942 108 aaKnown RBP16.31■□□□□ 0.2
PTBP1-203ENST00000356948 KRT17Q04695 432 aa16.31■□□□□ 0.2
PTBP1-203ENST00000356948 PPP1R7Q15435 360 aa16.31■□□□□ 0.2
PTBP1-203ENST00000356948 FAM133BQ5BKY9 247 aaKnown RBP16.31■□□□□ 0.2
PTBP1-203ENST00000356948 STYK1Q6J9G0 422 aa16.31■□□□□ 0.2
PTBP1-203ENST00000356948 TAS1R3Q7RTX0 852 aa16.31■□□□□ 0.2
PTBP1-203ENST00000356948 FAM228AQ86W67 206 aa16.31■□□□□ 0.2
PTBP1-203ENST00000356948 GDAP1Q8TB36 358 aa16.31■□□□□ 0.2
PTBP1-203ENST00000356948 CDC42EP4Q9H3Q1 356 aaKnown RBP16.31■□□□□ 0.2
PTBP1-203ENST00000356948 TMEM206Q9H813 350 aa16.31■□□□□ 0.2
PTBP1-203ENST00000356948 FEM1BQ9UK73 627 aa16.31■□□□□ 0.2
PTBP1-203ENST00000356948 USTQ9Y2C2 406 aa16.31■□□□□ 0.2
PTBP1-203ENST00000356948 BAATQ14032 418 aaPredicted RBP16.31■□□□□ 0.2
PTBP1-203ENST00000356948 SEL1L2Q5TEA6 688 aa16.31■□□□□ 0.2
PTBP1-203ENST00000356948 C11orf63Q6NUN7 778 aa16.31■□□□□ 0.2
PTBP1-203ENST00000356948 EXOC3L1Q86VI1 746 aa16.31■□□□□ 0.2
PTBP1-203ENST00000356948 ANKRD42Q8N9B4 389 aa16.31■□□□□ 0.2
PTBP1-203ENST00000356948 TCP11Q8WWU5 503 aa16.31■□□□□ 0.2
PTBP1-203ENST00000356948 TRIM6Q9C030 488 aaPredicted RBP16.31■□□□□ 0.2
PTBP1-203ENST00000356948 RAB20Q9NX57 234 aa16.31■□□□□ 0.2
PTBP1-203ENST00000356948 SWSAP1Q6NVH7 229 aa16.3■□□□□ 0.2
PTBP1-203ENST00000356948 CAPN12Q6ZSI9 719 aa16.3■□□□□ 0.2
PTBP1-203ENST00000356948 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.3■□□□□ 0.22e-6■■■■■ 50.8
PTBP1-203ENST00000356948 ATG4CQ96DT6 458 aa16.3■□□□□ 0.2
PTBP1-203ENST00000356948 CHMP6Q96FZ7 201 aa16.3■□□□□ 0.2
PTBP1-203ENST00000356948 CEP170P1Q96L14 293 aa16.3■□□□□ 0.2
PTBP1-203ENST00000356948 HAPLN2Q9GZV7 340 aa16.3■□□□□ 0.2
PTBP1-203ENST00000356948 PGAP2Q9UHJ9 254 aa16.3■□□□□ 0.2
PTBP1-203ENST00000356948 MROH7Q68CQ1 1323 aa16.3■□□□□ 0.2
PTBP1-203ENST00000356948 SYNGAP1Q96PV0 1343 aa16.3■□□□□ 0.2
PTBP1-203ENST00000356948 TTLL13PA6NNM8 815 aa16.3■□□□□ 0.2
PTBP1-203ENST00000356948 PI4K2BG5E9Z4 385 aa16.3■□□□□ 0.2
PTBP1-203ENST00000356948 RGS20O76081 388 aa16.3■□□□□ 0.2
PTBP1-203ENST00000356948 VIMP08670 466 aaKnown RBP16.3■□□□□ 0.2
PTBP1-203ENST00000356948 CETN1Q12798 172 aa16.3■□□□□ 0.2
PTBP1-203ENST00000356948 CACNA2D3Q8IZS8 1091 aa16.3■□□□□ 0.2
PTBP1-203ENST00000356948 FAM129AQ9BZQ8 928 aa16.3■□□□□ 0.2
PTBP1-203ENST00000356948 EDN1P05305 212 aa16.3■□□□□ 0.2
PTBP1-203ENST00000356948 CHRNA3P32297 505 aa16.3■□□□□ 0.2
PTBP1-203ENST00000356948 SCTRP47872 440 aa16.3■□□□□ 0.2
PTBP1-203ENST00000356948 SATB1Q01826 763 aa16.3■□□□□ 0.2
PTBP1-203ENST00000356948 KRT39Q6A163 491 aa16.3■□□□□ 0.2
PTBP1-203ENST00000356948 MRRFQ96E11 262 aaKnown RBP16.3■□□□□ 0.2
PTBP1-203ENST00000356948 C10orf88Q9H8K7 445 aa16.3■□□□□ 0.2
PTBP1-203ENST00000356948 KMT5AQ9NQR1 393 aa16.3■□□□□ 0.2
PTBP1-203ENST00000356948 ABCF3Q9NUQ8 709 aa16.3■□□□□ 0.2
PTBP1-203ENST00000356948 KCND2Q9NZV8 630 aa16.3■□□□□ 0.2
PTBP1-203ENST00000356948 ASIC3Q9UHC3 531 aa16.3■□□□□ 0.2
PTBP1-203ENST00000356948 PCYOX1Q9UHG3 505 aa16.3■□□□□ 0.2
PTBP1-203ENST00000356948 HNRNPDLO14979 420 aaKnown RBP16.29■□□□□ 0.2
PTBP1-203ENST00000356948 ZSCAN5DPP0CG00 497 aa16.29■□□□□ 0.2
PTBP1-203ENST00000356948 HARSP12081 509 aaKnown RBP16.29■□□□□ 0.2
PTBP1-203ENST00000356948 CD58P19256 250 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms