RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 RAB15P59190 212 aa16.73■□□□□ 0.27
RTN3-205ENST00000356000 CYP4A11Q02928 519 aa16.73■□□□□ 0.27
RTN3-205ENST00000356000 PPIDQ08752 370 aaKnown RBP16.73■□□□□ 0.27
RTN3-205ENST00000356000 PDIA6Q15084 440 aa16.73■□□□□ 0.27
RTN3-205ENST00000356000 PDSS2Q86YH6 399 aa16.73■□□□□ 0.27
RTN3-205ENST00000356000 DMTF1Q9Y222 760 aa16.73■□□□□ 0.27
RTN3-205ENST00000356000 PKD1L3Q7Z443 1732 aa16.73■□□□□ 0.27
RTN3-205ENST00000356000 PRAMEF22A3QJZ6 481 aa16.72■□□□□ 0.27
RTN3-205ENST00000356000 SPTLC1O15269 473 aa16.72■□□□□ 0.27
RTN3-205ENST00000356000 PGM3O95394 542 aa16.72■□□□□ 0.27
RTN3-205ENST00000356000 TFAP2AP05549 437 aa16.72■□□□□ 0.27
RTN3-205ENST00000356000 UQCRBP14927 111 aa16.72■□□□□ 0.27
RTN3-205ENST00000356000 MUTP22033 750 aa16.72■□□□□ 0.27
RTN3-205ENST00000356000 STIP1P31948 543 aaKnown RBP16.72■□□□□ 0.27
RTN3-205ENST00000356000 RAP1GDS1P52306 607 aa16.72■□□□□ 0.27
RTN3-205ENST00000356000 NPY5RQ15761 445 aa16.72■□□□□ 0.27
RTN3-205ENST00000356000 SCYL3Q8IZE3 742 aa16.72■□□□□ 0.27
RTN3-205ENST00000356000 OR6Y1Q8NGX8 325 aa16.72■□□□□ 0.27
RTN3-205ENST00000356000 SYT17Q9BSW7 474 aa16.72■□□□□ 0.27
RTN3-205ENST00000356000 CYLDQ9NQC7 956 aa16.72■□□□□ 0.27
RTN3-205ENST00000356000 TIMM22Q9Y584 194 aa16.72■□□□□ 0.27
RTN3-205ENST00000356000 PCDHA3Q9Y5H8 950 aa16.72■□□□□ 0.27
RTN3-205ENST00000356000 TBC1D12O60347 775 aa16.72■□□□□ 0.27
RTN3-205ENST00000356000 ADAM23O75077 832 aa16.72■□□□□ 0.27
RTN3-205ENST00000356000 PHF2O75151 1096 aa16.72■□□□□ 0.27
RTN3-205ENST00000356000 OXSR1O95747 527 aaPredicted RBP16.72■□□□□ 0.27
RTN3-205ENST00000356000 FCER1AP12319 257 aa16.72■□□□□ 0.27
RTN3-205ENST00000356000 HOXC9P31274 260 aa16.72■□□□□ 0.27
RTN3-205ENST00000356000 IL15P40933 162 aaPredicted RBP16.72■□□□□ 0.27
RTN3-205ENST00000356000 CHN2P52757 468 aa16.72■□□□□ 0.27
RTN3-205ENST00000356000 EXOC3L4Q17RC7 722 aa16.72■□□□□ 0.27
RTN3-205ENST00000356000 MTDHQ86UE4 582 aaKnown RBP16.72■□□□□ 0.27
RTN3-205ENST00000356000 PRPF31Q8WWY3 499 aaKnown RBP16.72■□□□□ 0.27
RTN3-205ENST00000356000 PPP1R10Q96QC0 940 aaKnown RBP16.72■□□□□ 0.27
RTN3-205ENST00000356000 SLCO1B3Q9NPD5 702 aa16.72■□□□□ 0.27
RTN3-205ENST00000356000 TRAF3IP3Q9Y228 551 aa16.72■□□□□ 0.27
RTN3-205ENST00000356000 ACTL7BQ9Y614 415 aa16.72■□□□□ 0.27
RTN3-205ENST00000356000 NUMBLQ9Y6R0 609 aa16.72■□□□□ 0.27
RTN3-205ENST00000356000 PODXLO00592 558 aa16.71■□□□□ 0.27
RTN3-205ENST00000356000 STK10O94804 968 aaKnown RBP16.71■□□□□ 0.27
RTN3-205ENST00000356000 FGFR1OPO95684 399 aaKnown RBP16.71■□□□□ 0.27
RTN3-205ENST00000356000 TTLL1O95922 423 aa16.71■□□□□ 0.27
RTN3-205ENST00000356000 ZBED1O96006 694 aa16.71■□□□□ 0.27
RTN3-205ENST00000356000 PCSK6P29122 969 aa16.71■□□□□ 0.27
RTN3-205ENST00000356000 MCM7P33993 719 aa16.71■□□□□ 0.27
RTN3-205ENST00000356000 COPB2P35606 906 aa16.71■□□□□ 0.27
RTN3-205ENST00000356000 RXRGP48443 463 aa16.71■□□□□ 0.27
RTN3-205ENST00000356000 RPL26P61254 145 aaKnown RBP16.71■□□□□ 0.27
RTN3-205ENST00000356000 ZFP28Q8NHY6 868 aa16.71■□□□□ 0.27
RTN3-205ENST00000356000 ZNF398Q8TD17 642 aa16.71■□□□□ 0.27
RTN3-205ENST00000356000 NSL1Q96IY1 281 aa16.71■□□□□ 0.27
RTN3-205ENST00000356000 ARL8BQ9NVJ2 186 aa16.71■□□□□ 0.27
RTN3-205ENST00000356000 ATP8B3O60423 1300 aa16.71■□□□□ 0.27
RTN3-205ENST00000356000 TRMUO75648 421 aaKnown RBP16.71■□□□□ 0.27
RTN3-205ENST00000356000 TMED10P49755 219 aaKnown RBP16.71■□□□□ 0.27
RTN3-205ENST00000356000 AP2B1P63010 937 aa16.71■□□□□ 0.27
RTN3-205ENST00000356000 COG7P83436 770 aa16.71■□□□□ 0.27
RTN3-205ENST00000356000 RAPGEF1Q13905 1077 aa16.71■□□□□ 0.27
RTN3-205ENST00000356000 KYNUQ16719 465 aa16.71■□□□□ 0.27
RTN3-205ENST00000356000 DEPDC1Q5TB30 811 aa16.71■□□□□ 0.27
RTN3-205ENST00000356000 RASSF3Q86WH2 238 aa16.71■□□□□ 0.27
RTN3-205ENST00000356000 SRBD1Q8N5C6 995 aaKnown RBP16.71■□□□□ 0.27
RTN3-205ENST00000356000 C4orf32Q8N8J7 132 aa16.71■□□□□ 0.27
RTN3-205ENST00000356000 ART4Q93070 314 aa16.71■□□□□ 0.27
RTN3-205ENST00000356000 TRIM11Q96F44 468 aa16.71■□□□□ 0.27
RTN3-205ENST00000356000 SUGT1Q9Y2Z0 365 aa16.71■□□□□ 0.27
RTN3-205ENST00000356000 ZNF831Q5JPB2 1677 aa16.7■□□□□ 0.26
RTN3-205ENST00000356000 A0A0A6YYK5 440 aaPredicted RBP16.7■□□□□ 0.26
RTN3-205ENST00000356000 TCEA3O75764 348 aa16.7■□□□□ 0.26
RTN3-205ENST00000356000 NAA20P61599 178 aa16.7■□□□□ 0.26
RTN3-205ENST00000356000 PLCB3Q01970 1234 aa16.7■□□□□ 0.26
RTN3-205ENST00000356000 ASIC2Q16515 512 aa16.7■□□□□ 0.26
RTN3-205ENST00000356000 UGT2A3Q6UWM9 527 aa16.7■□□□□ 0.26
RTN3-205ENST00000356000 PACS1Q6VY07 963 aa16.7■□□□□ 0.26
RTN3-205ENST00000356000 SREK1Q8WXA9 508 aaKnown RBP16.7■□□□□ 0.26
RTN3-205ENST00000356000 SPOCK2Q92563 424 aa16.7■□□□□ 0.26
RTN3-205ENST00000356000 OSBPL10Q9BXB5 764 aa16.7■□□□□ 0.26
RTN3-205ENST00000356000 CDC42EP4Q9H3Q1 356 aaKnown RBP16.7■□□□□ 0.26
RTN3-205ENST00000356000 TAS2R1Q9NYW7 299 aa16.7■□□□□ 0.26
RTN3-205ENST00000356000 LGALS13Q9UHV8 139 aa16.7■□□□□ 0.26
RTN3-205ENST00000356000 ASAP1Q9ULH1 1129 aa16.7■□□□□ 0.26
RTN3-205ENST00000356000 FAF1Q9UNN5 650 aaPredicted RBP16.7■□□□□ 0.26
RTN3-205ENST00000356000 ARHGAP10A1A4S6 786 aa16.7■□□□□ 0.26
RTN3-205ENST00000356000 CCDC160A6NGH7 325 aa16.7■□□□□ 0.26
RTN3-205ENST00000356000 TCF7P36402 384 aaPredicted RBP16.7■□□□□ 0.26
RTN3-205ENST00000356000 NPEPPSP55786 919 aa16.7■□□□□ 0.26
RTN3-205ENST00000356000 ARID5AQ03989 594 aa16.7■□□□□ 0.26
RTN3-205ENST00000356000 WTAPQ15007 396 aa16.7■□□□□ 0.26
RTN3-205ENST00000356000 TMEM266Q2M3C6 531 aa16.7■□□□□ 0.26
RTN3-205ENST00000356000 NADK2Q4G0N4 442 aa16.7■□□□□ 0.26
RTN3-205ENST00000356000 DCAF12L1Q5VU92 463 aa16.7■□□□□ 0.26
RTN3-205ENST00000356000 DZIP1Q86YF9 867 aaKnown RBP16.7■□□□□ 0.26
RTN3-205ENST00000356000 ARHGAP24Q8N264 748 aa16.7■□□□□ 0.26
RTN3-205ENST00000356000 BHMTQ93088 406 aa16.7■□□□□ 0.26
RTN3-205ENST00000356000 CCT7Q99832 543 aa16.7■□□□□ 0.26
RTN3-205ENST00000356000 TPK1Q9H3S4 243 aa16.7■□□□□ 0.26
RTN3-205ENST00000356000 TRPC7Q9HCX4 862 aa16.7■□□□□ 0.26
RTN3-205ENST00000356000 AMFRQ9UKV5 643 aa16.7■□□□□ 0.26
RTN3-205ENST00000356000 PCDH11YQ9BZA8 1340 aa16.7■□□□□ 0.26
RTN3-205ENST00000356000 FAM47DPA6NHR8 397 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms