RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 USP17L6PQ6QN14 398 aa15.68■□□□□ 0.1
LMX1B-201ENST00000355497 EPN3Q9H201 632 aa15.68■□□□□ 0.1
LMX1B-201ENST00000355497 RBAKQ9NYW8 714 aaPredicted RBP15.68■□□□□ 0.1
LMX1B-201ENST00000355497 KCNN4O15554 427 aa15.68■□□□□ 0.1
LMX1B-201ENST00000355497 SULT1E1P49888 294 aa15.68■□□□□ 0.1
LMX1B-201ENST00000355497 GLYCTKQ8IVS8 523 aa15.68■□□□□ 0.1
LMX1B-201ENST00000355497 TSPAN17Q96FV3 270 aa15.68■□□□□ 0.1
LMX1B-201ENST00000355497 STMN3Q9NZ72 180 aa15.68■□□□□ 0.1
LMX1B-201ENST00000355497 CYP2D6P10635 497 aa15.68■□□□□ 0.1
LMX1B-201ENST00000355497 IMPDH2P12268 514 aa15.68■□□□□ 0.1
LMX1B-201ENST00000355497 MCAMP43121 646 aa15.68■□□□□ 0.1
LMX1B-201ENST00000355497 TTLL4Q14679 1199 aa15.68■□□□□ 0.1
LMX1B-201ENST00000355497 SPDYAQ5MJ70 313 aa15.68■□□□□ 0.1
LMX1B-201ENST00000355497 RCSD1Q6JBY9 416 aa15.68■□□□□ 0.1
LMX1B-201ENST00000355497 FAM180AQ6UWF9 173 aa15.68■□□□□ 0.1
LMX1B-201ENST00000355497 DHX40Q8IX18 779 aaKnown RBP15.68■□□□□ 0.1
LMX1B-201ENST00000355497 RCOR2Q8IZ40 523 aa15.68■□□□□ 0.1
LMX1B-201ENST00000355497 FMR1NBQ8N0W7 255 aaPredicted RBP15.68■□□□□ 0.1
LMX1B-201ENST00000355497 OXER1Q8TDS5 423 aa15.68■□□□□ 0.1
LMX1B-201ENST00000355497 CLMNQ96JQ2 1002 aa15.68■□□□□ 0.1
LMX1B-201ENST00000355497 RNPC3Q96LT9 517 aaKnown RBP15.68■□□□□ 0.1
LMX1B-201ENST00000355497 ZNF560Q96MR9 790 aa15.68■□□□□ 0.1
LMX1B-201ENST00000355497 WDR19Q8NEZ3 1342 aa15.67■□□□□ 0.1
LMX1B-201ENST00000355497 TTC26A0AVF1 554 aa15.67■□□□□ 0.1
LMX1B-201ENST00000355497 POTEFA5A3E0 1075 aa15.67■□□□□ 0.1
LMX1B-201ENST00000355497 POTEIP0CG38 1075 aa15.67■□□□□ 0.1
LMX1B-201ENST00000355497 HSD17B4P51659 736 aa15.67■□□□□ 0.1
LMX1B-201ENST00000355497 DALRD3Q5D0E6 543 aaKnown RBP15.67■□□□□ 0.1
LMX1B-201ENST00000355497 POTEGQ6S5H5 508 aa15.67■□□□□ 0.1
LMX1B-201ENST00000355497 POTEEQ6S8J3 1075 aa15.67■□□□□ 0.1
LMX1B-201ENST00000355497 KIRREL3Q8IZU9 778 aa15.67■□□□□ 0.1
LMX1B-201ENST00000355497 AGGF1Q8N302 714 aaeCLIP15.67■□□□□ 0.1
LMX1B-201ENST00000355497 RANBP17Q9H2T7 1088 aaKnown RBP15.67■□□□□ 0.1
LMX1B-201ENST00000355497 DIABLOQ9NR28 239 aa15.67■□□□□ 0.1
LMX1B-201ENST00000355497 ABCA5Q8WWZ7 1642 aa15.67■□□□□ 0.1
LMX1B-201ENST00000355497 USP17L10C9JJH3 530 aa15.67■□□□□ 0.1
LMX1B-201ENST00000355497 HIST1H2AGP0C0S8 130 aaPredicted RBP15.67■□□□□ 0.1
LMX1B-201ENST00000355497 HIST1H2ADP20671 130 aa15.67■□□□□ 0.1
LMX1B-201ENST00000355497 MDH1P40925 334 aaKnown RBP15.67■□□□□ 0.1
LMX1B-201ENST00000355497 TPI1P60174 286 aa15.67■□□□□ 0.1
LMX1B-201ENST00000355497 PSMC5P62195 406 aa15.67■□□□□ 0.1
LMX1B-201ENST00000355497 GRM4Q14833 912 aa15.67■□□□□ 0.1
LMX1B-201ENST00000355497 NKX1-1Q15270 411 aaPredicted RBP15.67■□□□□ 0.1
LMX1B-201ENST00000355497 TXNRD1Q16881 649 aa15.67■□□□□ 0.1
LMX1B-201ENST00000355497 CMTM5Q96DZ9 223 aa15.67■□□□□ 0.1
LMX1B-201ENST00000355497 HIST1H2AHQ96KK5 128 aa15.67■□□□□ 0.1
LMX1B-201ENST00000355497 HIST1H2AJQ99878 128 aa15.67■□□□□ 0.1
LMX1B-201ENST00000355497 H2AFJQ9BTM1 129 aa15.67■□□□□ 0.1
LMX1B-201ENST00000355497 PLEKHG1Q9ULL1 1385 aa15.67■□□□□ 0.1
LMX1B-201ENST00000355497 EMSYQ7Z589 1322 aa15.67■□□□□ 0.1
LMX1B-201ENST00000355497 A0A1W2PQC6 194 aa15.67■□□□□ 0.1
LMX1B-201ENST00000355497 CRKP46108 304 aa15.67■□□□□ 0.1
LMX1B-201ENST00000355497 GTF2H3Q13889 308 aa15.67■□□□□ 0.1
LMX1B-201ENST00000355497 LRIG3Q6UXM1 1119 aa15.67■□□□□ 0.1
LMX1B-201ENST00000355497 CYB5R4Q7L1T6 521 aa15.67■□□□□ 0.1
LMX1B-201ENST00000355497 STAG2Q8N3U4 1231 aa15.67■□□□□ 0.1
LMX1B-201ENST00000355497 ELMO2Q96JJ3 720 aa15.67■□□□□ 0.1
LMX1B-201ENST00000355497 SLC9A1P19634 815 aa15.67■□□□□ 0.1
LMX1B-201ENST00000355497 SSTR3P32745 418 aaPredicted RBP15.67■□□□□ 0.1
LMX1B-201ENST00000355497 FRMD5Q7Z6J6 570 aa15.67■□□□□ 0.1
LMX1B-201ENST00000355497 CNPY4Q8N129 248 aa15.67■□□□□ 0.1
LMX1B-201ENST00000355497 DTX3LQ8TDB6 740 aa15.67■□□□□ 0.1
LMX1B-201ENST00000355497 CCDC134Q9H6E4 229 aa15.67■□□□□ 0.1
LMX1B-201ENST00000355497 PIDD1Q9HB75 910 aa15.67■□□□□ 0.1
LMX1B-201ENST00000355497 TJP2Q9UDY2 1190 aa15.67■□□□□ 0.1
LMX1B-201ENST00000355497 TMEM2Q9UHN6 1383 aa15.67■□□□□ 0.1
LMX1B-201ENST00000355497 CLASP1Q7Z460 1538 aa15.67■□□□□ 0.1
LMX1B-201ENST00000355497 CPB1P15086 417 aa15.67■□□□□ 0.1
LMX1B-201ENST00000355497 RUNX1T1Q06455 604 aa15.67■□□□□ 0.1
LMX1B-201ENST00000355497 FAM162AQ96A26 154 aa15.67■□□□□ 0.1
LMX1B-201ENST00000355497 CEP95Q96GE4 821 aa15.67■□□□□ 0.1
LMX1B-201ENST00000355497 GPR101Q96P66 508 aaPredicted RBP15.67■□□□□ 0.1
LMX1B-201ENST00000355497 LXNQ9BS40 222 aa15.67■□□□□ 0.1
LMX1B-201ENST00000355497 NPHS2Q9NP85 383 aa15.67■□□□□ 0.1
LMX1B-201ENST00000355497 GOLGA8RI6L899 631 aa15.66■□□□□ 0.1
LMX1B-201ENST00000355497 TCF3P15923 654 aa15.66■□□□□ 0.1
LMX1B-201ENST00000355497 DEFA1P59665 94 aa15.66■□□□□ 0.1
LMX1B-201ENST00000355497 DEFA3P59666 94 aa15.66■□□□□ 0.1
LMX1B-201ENST00000355497 ZNF473Q8WTR7 871 aaKnown RBP15.66■□□□□ 0.1
LMX1B-201ENST00000355497 H2AFY2Q9P0M6 372 aaPredicted RBP15.66■□□□□ 0.1
LMX1B-201ENST00000355497 AMACRQ9UHK6 382 aa15.66■□□□□ 0.1
LMX1B-201ENST00000355497 SASH1O94885 1247 aa15.66■□□□□ 0.1
LMX1B-201ENST00000355497 CHN1P15882 459 aa15.66■□□□□ 0.1
LMX1B-201ENST00000355497 RCAN1P53805 252 aa15.66■□□□□ 0.1
LMX1B-201ENST00000355497 SESN2P58004 480 aaPredicted RBP15.66■□□□□ 0.1
LMX1B-201ENST00000355497 STX3Q13277 289 aa15.66■□□□□ 0.1
LMX1B-201ENST00000355497 BYSLQ13895 437 aaKnown RBP15.66■□□□□ 0.1
LMX1B-201ENST00000355497 EME1Q96AY2 570 aa15.66■□□□□ 0.1
LMX1B-201ENST00000355497 KIF12Q96FN5 646 aa15.66■□□□□ 0.1
LMX1B-201ENST00000355497 KCNK16Q96T55 309 aa15.66■□□□□ 0.1
LMX1B-201ENST00000355497 GGT7Q9UJ14 662 aa15.66■□□□□ 0.1
LMX1B-201ENST00000355497 USP27XA6NNY8 438 aa15.66■□□□□ 0.1
LMX1B-201ENST00000355497 POTEAQ6S8J7 498 aa15.66■□□□□ 0.1
LMX1B-201ENST00000355497 GJB4Q9NTQ9 266 aa15.66■□□□□ 0.1
LMX1B-201ENST00000355497 KRT75O95678 551 aa15.66■□□□□ 0.1
LMX1B-201ENST00000355497 ENO3P13929 434 aaPredicted RBP15.66■□□□□ 0.1
LMX1B-201ENST00000355497 SEMA3FQ13275 785 aa15.66■□□□□ 0.1
LMX1B-201ENST00000355497 KIZQ2M2Z5 673 aa15.66■□□□□ 0.1
LMX1B-201ENST00000355497 COBLL1Q53SF7 1204 aa15.66■□□□□ 0.1
LMX1B-201ENST00000355497 TMED8Q6PL24 325 aaPredicted RBP15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms