RNA–Protein interactions for RNA: ENST00000354828.7

GABPA-201, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 5,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-201ENST00000354828 RAB44Q7Z6P3 723 aaPredicted RBP10.33□□□□□ -0.76
GABPA-201ENST00000354828 ACRBPQ8NEB7 543 aa10.33□□□□□ -0.76
GABPA-201ENST00000354828 NUDCD1Q96RS6 583 aa10.33□□□□□ -0.76
GABPA-201ENST00000354828 DDX23Q9BUQ8 820 aaKnown RBP10.33□□□□□ -0.76
GABPA-201ENST00000354828 PLEKHA5Q9HAU0 1116 aa10.33□□□□□ -0.76
GABPA-201ENST00000354828 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.33□□□□□ -0.76
GABPA-201ENST00000354828 DPP3Q9NY33 737 aa10.33□□□□□ -0.76
GABPA-201ENST00000354828 SLC4A7Q9Y6M7 1214 aa10.33□□□□□ -0.76
GABPA-201ENST00000354828 RGS16O15492 202 aaPredicted RBP10.33□□□□□ -0.76
GABPA-201ENST00000354828 CYP26A1O43174 497 aa10.33□□□□□ -0.76
GABPA-201ENST00000354828 TJP3O95049 919 aa10.33□□□□□ -0.76
GABPA-201ENST00000354828 CTNNA1P35221 906 aaKnown RBP10.33□□□□□ -0.76
GABPA-201ENST00000354828 MAPRE1Q15691 268 aaKnown RBP10.33□□□□□ -0.76
GABPA-201ENST00000354828 C10orf120Q5SQS8 335 aa10.33□□□□□ -0.76
GABPA-201ENST00000354828 CCDC13Q8IYE1 715 aa10.33□□□□□ -0.76
GABPA-201ENST00000354828 DAGLBQ8NCG7 672 aa10.33□□□□□ -0.76
GABPA-201ENST00000354828 REPS2Q8NFH8 660 aa10.33□□□□□ -0.76
GABPA-201ENST00000354828 RIOX1Q9H6W3 641 aa10.33□□□□□ -0.76
GABPA-201ENST00000354828 PDE11AQ9HCR9 933 aa10.33□□□□□ -0.76
GABPA-201ENST00000354828 LRRC53A6NM62 1247 aa10.32□□□□□ -0.76
GABPA-201ENST00000354828 POC1B-GALNT4F8VUJ3 575 aa10.32□□□□□ -0.76
GABPA-201ENST00000354828 PI4K2BG5E9Z4 385 aa10.32□□□□□ -0.76
GABPA-201ENST00000354828 H3BRJ5 948 aa10.32□□□□□ -0.76
GABPA-201ENST00000354828 PGRMC1O00264 195 aaKnown RBP10.32□□□□□ -0.76
GABPA-201ENST00000354828 DFFAO00273 331 aa10.32□□□□□ -0.76
GABPA-201ENST00000354828 HSD17B4P51659 736 aa10.32□□□□□ -0.76
GABPA-201ENST00000354828 AMHR2Q16671 573 aa10.32□□□□□ -0.76
GABPA-201ENST00000354828 KCTD17Q8N5Z5 321 aa10.32□□□□□ -0.76
GABPA-201ENST00000354828 RBM41Q96IZ5 413 aaKnown RBP10.32□□□□□ -0.76
GABPA-201ENST00000354828 MED15Q96RN5 788 aa10.32□□□□□ -0.76
GABPA-201ENST00000354828 EPAS1Q99814 870 aa10.32□□□□□ -0.76
GABPA-201ENST00000354828 WDR18Q9BV38 432 aa10.32□□□□□ -0.76
GABPA-201ENST00000354828 IL17RBQ9NRM6 502 aa10.32□□□□□ -0.76
GABPA-201ENST00000354828 HOMER3Q9NSC5 361 aa10.32□□□□□ -0.76
GABPA-201ENST00000354828 KANSL3Q9P2N6 904 aa10.32□□□□□ -0.76
GABPA-201ENST00000354828 TBX20Q9UMR3 447 aa10.32□□□□□ -0.76
GABPA-201ENST00000354828 DYNC1I1O14576 645 aa10.32□□□□□ -0.76
GABPA-201ENST00000354828 WEE2P0C1S8 567 aa10.32□□□□□ -0.76
GABPA-201ENST00000354828 KLRC2P26717 231 aa10.32□□□□□ -0.76
GABPA-201ENST00000354828 NAMPTP43490 491 aa10.32□□□□□ -0.76
GABPA-201ENST00000354828 TPD52P55327 224 aaPredicted RBP10.32□□□□□ -0.76
GABPA-201ENST00000354828 NR1H3Q13133 447 aa10.32□□□□□ -0.76
GABPA-201ENST00000354828 CCDC144BQ3MJ40 725 aa10.32□□□□□ -0.76
GABPA-201ENST00000354828 ANKRD40Q6AI12 368 aa10.32□□□□□ -0.76
GABPA-201ENST00000354828 NXNQ6DKJ4 435 aa10.32□□□□□ -0.76
GABPA-201ENST00000354828 MGARPQ8TDB4 240 aa10.32□□□□□ -0.76
GABPA-201ENST00000354828 C18orf8Q96DM3 657 aa10.32□□□□□ -0.76
GABPA-201ENST00000354828 HINFPQ9BQA5 517 aa10.32□□□□□ -0.76
GABPA-201ENST00000354828 DAAM1Q9Y4D1 1078 aa10.32□□□□□ -0.76
GABPA-201ENST00000354828 TBC1D12O60347 775 aa10.32□□□□□ -0.76
GABPA-201ENST00000354828 ATRNO75882 1429 aa10.32□□□□□ -0.76
GABPA-201ENST00000354828 POMCP01189 267 aa10.32□□□□□ -0.76
GABPA-201ENST00000354828 HLA-DRAP01903 254 aa10.32□□□□□ -0.76
GABPA-201ENST00000354828 CKMP06732 381 aa10.32□□□□□ -0.76
GABPA-201ENST00000354828 HOXC6P09630 235 aa10.32□□□□□ -0.76
GABPA-201ENST00000354828 HARS2P49590 506 aaKnown RBP10.32□□□□□ -0.76
GABPA-201ENST00000354828 MOXD1Q6UVY6 613 aa10.32□□□□□ -0.76
GABPA-201ENST00000354828 RASGRP2Q7LDG7 609 aa10.32□□□□□ -0.76
GABPA-201ENST00000354828 SDCCAG8Q86SQ7 713 aaPredicted RBP10.32□□□□□ -0.76
GABPA-201ENST00000354828 KRT222Q8N1A0 295 aa10.32□□□□□ -0.76
GABPA-201ENST00000354828 VGLL2Q8N8G2 317 aa10.32□□□□□ -0.76
GABPA-201ENST00000354828 C7orf25Q9BPX7 421 aa10.32□□□□□ -0.76
GABPA-201ENST00000354828 HEMGNQ9BXL5 484 aa10.32□□□□□ -0.76
GABPA-201ENST00000354828 DOLKQ9UPQ8 538 aa10.32□□□□□ -0.76
GABPA-201ENST00000354828 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.32□□□□□ -0.76
GABPA-201ENST00000354828 MRC1P22897 1456 aa10.32□□□□□ -0.76
GABPA-201ENST00000354828 SOWAHDA6NJG2 315 aa10.32□□□□□ -0.76
GABPA-201ENST00000354828 OGTO15294 1046 aa10.32□□□□□ -0.76
GABPA-201ENST00000354828 VSTM4Q8IW00 320 aa10.32□□□□□ -0.76
GABPA-201ENST00000354828 SLC35F6Q8N357 371 aa10.32□□□□□ -0.76
GABPA-201ENST00000354828 HVCN1Q96D96 273 aa10.32□□□□□ -0.76
GABPA-201ENST00000354828 RILPQ96NA2 401 aa10.32□□□□□ -0.76
GABPA-201ENST00000354828 MUC3BQ9H195 1237 aa10.32□□□□□ -0.76
GABPA-201ENST00000354828 IL25Q9H293 177 aa10.32□□□□□ -0.76
GABPA-201ENST00000354828 LCMT1Q9UIC8 334 aa10.32□□□□□ -0.76
GABPA-201ENST00000354828 HPS5Q9UPZ3 1129 aa10.32□□□□□ -0.76
GABPA-201ENST00000354828 JRKLQ9Y4A0 524 aa10.32□□□□□ -0.76
GABPA-201ENST00000354828 TACC3Q9Y6A5 838 aa10.32□□□□□ -0.76
GABPA-201ENST00000354828 BTBD19C9JJ37 291 aa10.31□□□□□ -0.76
GABPA-201ENST00000354828 HGSO14964 777 aaPredicted RBP10.31□□□□□ -0.76
GABPA-201ENST00000354828 SLC16A3O15427 465 aaKnown RBP10.31□□□□□ -0.76
GABPA-201ENST00000354828 NDUFA10O95299 355 aa10.31□□□□□ -0.76
GABPA-201ENST00000354828 FTLP02792 175 aaPredicted RBP10.31□□□□□ -0.76
GABPA-201ENST00000354828 SCP2P22307 547 aa10.31□□□□□ -0.76
GABPA-201ENST00000354828 CXCR5P32302 372 aa10.31□□□□□ -0.76
GABPA-201ENST00000354828 ELAVL2Q12926 359 aaKnown RBP10.31□□□□□ -0.76
GABPA-201ENST00000354828 SEC23AQ15436 765 aa10.31□□□□□ -0.76
GABPA-201ENST00000354828 BBS9Q3SYG4 887 aa10.31□□□□□ -0.76
GABPA-201ENST00000354828 SPRYD7Q5W111 196 aa10.31□□□□□ -0.76
GABPA-201ENST00000354828 BHMTQ93088 406 aa10.31□□□□□ -0.76
GABPA-201ENST00000354828 RNF25Q96BH1 459 aaPredicted RBP10.31□□□□□ -0.76
GABPA-201ENST00000354828 TLK1Q9UKI8 766 aa10.31□□□□□ -0.76
GABPA-201ENST00000354828 CASTOR2A6NHX0 329 aa10.31□□□□□ -0.76
GABPA-201ENST00000354828 SPDYE5A6NIY4 337 aa10.31□□□□□ -0.76
GABPA-201ENST00000354828 YDJCA8MPS7 323 aa10.31□□□□□ -0.76
GABPA-201ENST00000354828 HMGCRP04035 888 aa10.31□□□□□ -0.76
GABPA-201ENST00000354828 FAM200BP0CF97 657 aa10.31□□□□□ -0.76
GABPA-201ENST00000354828 ZBTB48P10074 688 aaPredicted RBP10.31□□□□□ -0.76
GABPA-201ENST00000354828 RAB27AP51159 221 aa10.31□□□□□ -0.76
GABPA-201ENST00000354828 NOP14P78316 857 aaKnown RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms