RNA–Protein interactions for RNA: ENST00000354725.7

SND1-201, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SND1, Length 3,476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-201ENST00000354725 TMEM39BQ9GZU3 492 aa11.57□□□□□ -0.56
SND1-201ENST00000354725 VCX3BQ9H321 246 aa11.57□□□□□ -0.56
SND1-201ENST00000354725 VCX3AQ9NNX9 186 aa11.57□□□□□ -0.56
SND1-201ENST00000354725 RLFQ13129 1914 aa11.57□□□□□ -0.56
SND1-201ENST00000354725 A0A0B4J203 849 aa11.56□□□□□ -0.56
SND1-201ENST00000354725 HTR3EA5X5Y0 456 aa11.56□□□□□ -0.56
SND1-201ENST00000354725 TACC1O75410 805 aa11.56□□□□□ -0.56
SND1-201ENST00000354725 ZMYND10O75800 440 aa11.56□□□□□ -0.56
SND1-201ENST00000354725 PDGFRBP09619 1106 aa11.56□□□□□ -0.56
SND1-201ENST00000354725 ZNF268Q14587 947 aaPredicted RBP11.56□□□□□ -0.56
SND1-201ENST00000354725 P3H1Q32P28 736 aa11.56□□□□□ -0.56
SND1-201ENST00000354725 USH1GQ495M9 461 aa11.56□□□□□ -0.56
SND1-201ENST00000354725 FIP1L1Q6UN15 594 aaKnown RBP11.56□□□□□ -0.56
SND1-201ENST00000354725 RAD54LQ92698 747 aa11.56□□□□□ -0.56
SND1-201ENST00000354725 INPP4AQ96PE3 977 aaPredicted RBP11.56□□□□□ -0.56
SND1-201ENST00000354725 RIC8AQ9NPQ8 531 aa11.56□□□□□ -0.56
SND1-201ENST00000354725 TSKSQ9UJT2 592 aa11.56□□□□□ -0.56
SND1-201ENST00000354725 DAAM1Q9Y4D1 1078 aa11.56□□□□□ -0.56
SND1-201ENST00000354725 GRID2IPA4D2P6 1211 aa11.56□□□□□ -0.56
SND1-201ENST00000354725 MOCS3O95396 460 aa11.56□□□□□ -0.56
SND1-201ENST00000354725 ARPC4P59998 168 aa11.56□□□□□ -0.56
SND1-201ENST00000354725 GSTM4Q03013 218 aa11.56□□□□□ -0.56
SND1-201ENST00000354725 TCERG1LQ5VWI1 586 aa11.56□□□□□ -0.56
SND1-201ENST00000354725 EGFLAMQ63HQ2 1017 aa11.56□□□□□ -0.56
SND1-201ENST00000354725 PPP4R3AQ6IN85 833 aa11.56□□□□□ -0.56
SND1-201ENST00000354725 NFRKBQ6P4R8 1299 aa11.56□□□□□ -0.56
SND1-201ENST00000354725 HEATR3Q7Z4Q2 680 aa11.56□□□□□ -0.56
SND1-201ENST00000354725 LILRB2Q8N423 598 aa11.56□□□□□ -0.56
SND1-201ENST00000354725 DEPTORQ8TB45 409 aa11.56□□□□□ -0.56
SND1-201ENST00000354725 MACROD2A1Z1Q3 448 aa11.56□□□□□ -0.56
SND1-201ENST00000354725 KLRF2D3W0D1 207 aa11.56□□□□□ -0.56
SND1-201ENST00000354725 CCNT1O60563 726 aaKnown RBP11.56□□□□□ -0.56
SND1-201ENST00000354725 ECHS1P30084 290 aa11.56□□□□□ -0.56
SND1-201ENST00000354725 HPDP32754 393 aaPredicted RBP11.56□□□□□ -0.56
SND1-201ENST00000354725 EAPPQ56P03 285 aaPredicted RBP11.56□□□□□ -0.56
SND1-201ENST00000354725 TMEM154Q6P9G4 183 aa11.56□□□□□ -0.56
SND1-201ENST00000354725 SH2D3CQ8N5H7 860 aa11.56□□□□□ -0.56
SND1-201ENST00000354725 CCT6BQ92526 530 aa11.56□□□□□ -0.56
SND1-201ENST00000354725 ASIC4Q96FT7 647 aa11.56□□□□□ -0.56
SND1-201ENST00000354725 SNX27Q96L92 541 aa11.56□□□□□ -0.56
SND1-201ENST00000354725 SRPK1Q96SB4 655 aaKnown RBP11.56□□□□□ -0.56
SND1-201ENST00000354725 CEP72Q9P209 647 aa11.56□□□□□ -0.56
SND1-201ENST00000354725 SLC37A4O43826 429 aa11.55□□□□□ -0.56
SND1-201ENST00000354725 GNA11P29992 359 aa11.55□□□□□ -0.56
SND1-201ENST00000354725 ASIC1P78348 528 aa11.55□□□□□ -0.56
SND1-201ENST00000354725 ITGA7Q13683 1181 aa11.55□□□□□ -0.56
SND1-201ENST00000354725 RRP1BQ14684 758 aaKnown RBP11.55□□□□□ -0.56
SND1-201ENST00000354725 MEI1Q5TIA1 1274 aa11.55□□□□□ -0.56
SND1-201ENST00000354725 OLIG1Q8TAK6 271 aa11.55□□□□□ -0.56
SND1-201ENST00000354725 AIPL1Q9NZN9 384 aa11.55□□□□□ -0.56
SND1-201ENST00000354725 LOXHD1Q8IVV2 1947 aa11.55□□□□□ -0.56
SND1-201ENST00000354725 VARSP26640 1264 aaKnown RBP11.55□□□□□ -0.56
SND1-201ENST00000354725 RFC5P40937 340 aa11.55□□□□□ -0.56
SND1-201ENST00000354725 MTIF2P46199 727 aaKnown RBP11.55□□□□□ -0.56
SND1-201ENST00000354725 NAB2Q15742 525 aa11.55□□□□□ -0.56
SND1-201ENST00000354725 ECM1Q16610 540 aa11.55□□□□□ -0.56
SND1-201ENST00000354725 Q3C1V9 767 aa11.55□□□□□ -0.56
SND1-201ENST00000354725 SDE2Q6IQ49 451 aa11.55□□□□□ -0.56
SND1-201ENST00000354725 ZNF554Q86TJ5 538 aa11.55□□□□□ -0.56
SND1-201ENST00000354725 ARHGAP18Q8N392 663 aa11.55□□□□□ -0.56
SND1-201ENST00000354725 TBCKQ8TEA7 893 aa11.55□□□□□ -0.56
SND1-201ENST00000354725 ANKRD49Q8WVL7 239 aa11.55□□□□□ -0.56
SND1-201ENST00000354725 LARP4BQ92615 738 aaKnown RBP11.55□□□□□ -0.56
SND1-201ENST00000354725 PLIN2Q99541 437 aa11.55□□□□□ -0.56
SND1-201ENST00000354725 POLD4Q9HCU8 107 aa11.55□□□□□ -0.56
SND1-201ENST00000354725 RBM12Q9NTZ6 932 aaKnown RBP11.55□□□□□ -0.56
SND1-201ENST00000354725 A0A0G2JMZ2 1700 aa11.55□□□□□ -0.56
SND1-201ENST00000354725 SMCO2A6NFE2 343 aa11.55□□□□□ -0.56
SND1-201ENST00000354725 HNRNPRO43390 633 aaKnown RBP11.55□□□□□ -0.56
SND1-201ENST00000354725 XPOTO43592 962 aaKnown RBP11.55□□□□□ -0.56
SND1-201ENST00000354725 USP2O75604 605 aaPredicted RBP11.55□□□□□ -0.56
SND1-201ENST00000354725 GSTT1P30711 240 aa11.55□□□□□ -0.56
SND1-201ENST00000354725 MDH1P40925 334 aaKnown RBP11.55□□□□□ -0.56
SND1-201ENST00000354725 TECP42680 631 aa11.55□□□□□ -0.56
SND1-201ENST00000354725 LRRC41Q15345 812 aa11.55□□□□□ -0.56
SND1-201ENST00000354725 LDLRAD1Q5T700 205 aa11.55□□□□□ -0.56
SND1-201ENST00000354725 NBPF12Q5TAG4 269 aaPredicted RBP11.55□□□□□ -0.56
SND1-201ENST00000354725 FOXB2Q5VYV0 432 aa11.55□□□□□ -0.56
SND1-201ENST00000354725 OR52E8Q6IFG1 317 aa11.55□□□□□ -0.56
SND1-201ENST00000354725 PPP1R18Q6NYC8 613 aa11.55□□□□□ -0.56
SND1-201ENST00000354725 MAEAQ7L5Y9 396 aa11.55□□□□□ -0.56
SND1-201ENST00000354725 KCNK18Q7Z418 384 aa11.55□□□□□ -0.56
SND1-201ENST00000354725 JAZF1Q86VZ6 243 aa11.55□□□□□ -0.56
SND1-201ENST00000354725 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.55□□□□□ -0.56
SND1-201ENST00000354725 UROC1Q96N76 676 aa11.55□□□□□ -0.56
SND1-201ENST00000354725 KCTD10Q9H3F6 313 aa11.55□□□□□ -0.56
SND1-201ENST00000354725 C6orf50Q9HD87 102 aa11.55□□□□□ -0.56
SND1-201ENST00000354725 A6NCN8 305 aa11.54□□□□□ -0.56
SND1-201ENST00000354725 PLCG2P16885 1265 aa11.54□□□□□ -0.56
SND1-201ENST00000354725 SPA17Q15506 151 aa11.54□□□□□ -0.56
SND1-201ENST00000354725 SLC44A4Q53GD3 710 aa11.54□□□□□ -0.56
SND1-201ENST00000354725 SH2D4BQ5SQS7 431 aa11.54□□□□□ -0.56
SND1-201ENST00000354725 TATDN1Q6P1N9 297 aa11.54□□□□□ -0.56
SND1-201ENST00000354725 ZNF365Q70YC5 407 aa11.54□□□□□ -0.56
SND1-201ENST00000354725 SV2BQ7L1I2 683 aa11.54□□□□□ -0.56
SND1-201ENST00000354725 TRIM59Q8IWR1 403 aa11.54□□□□□ -0.56
SND1-201ENST00000354725 SPICE1Q8N0Z3 855 aa11.54□□□□□ -0.56
SND1-201ENST00000354725 SIX5Q8N196 739 aa11.54□□□□□ -0.56
SND1-201ENST00000354725 SLC44A5Q8NCS7 719 aa11.54□□□□□ -0.56
SND1-201ENST00000354725 SEC16BQ96JE7 1060 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms