RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 UVSSAQ2YD98 709 aa17.63■□□□□ 0.41
DDX55-202ENST00000354291 CEP68Q76N32 757 aa17.63■□□□□ 0.41
DDX55-202ENST00000354291 EXOC8Q8IYI6 725 aa17.63■□□□□ 0.41
DDX55-202ENST00000354291 PIK3R5Q8WYR1 880 aa17.63■□□□□ 0.41
DDX55-202ENST00000354291 DNASE1L2Q92874 299 aa17.63■□□□□ 0.41
DDX55-202ENST00000354291 ELSPBP1Q96BH3 223 aa17.63■□□□□ 0.41
DDX55-202ENST00000354291 CCDC51Q96ER9 411 aa17.63■□□□□ 0.41
DDX55-202ENST00000354291 SPEGQ15772 3267 aa17.63■□□□□ 0.41
DDX55-202ENST00000354291 CASTOR2A6NHX0 329 aa17.62■□□□□ 0.41
DDX55-202ENST00000354291 AXIN1O15169 862 aa17.62■□□□□ 0.41
DDX55-202ENST00000354291 REC8O95072 547 aa17.62■□□□□ 0.41
DDX55-202ENST00000354291 RHOP08100 348 aa17.62■□□□□ 0.41
DDX55-202ENST00000354291 HSPA4P34932 840 aa17.62■□□□□ 0.41
DDX55-202ENST00000354291 GRIK3Q13003 919 aa17.62■□□□□ 0.41
DDX55-202ENST00000354291 SF3A2Q15428 464 aaKnown RBP17.62■□□□□ 0.41
DDX55-202ENST00000354291 CCDC6Q16204 474 aa17.62■□□□□ 0.41
DDX55-202ENST00000354291 SLC5A9Q2M3M2 681 aa17.62■□□□□ 0.41
DDX55-202ENST00000354291 Q4G0T1 1027 aa17.62■□□□□ 0.41
DDX55-202ENST00000354291 POTEHQ6S545 545 aa17.62■□□□□ 0.41
DDX55-202ENST00000354291 B3GNT9Q6UX72 402 aa17.62■□□□□ 0.41
DDX55-202ENST00000354291 FERMT3Q86UX7 667 aa17.62■□□□□ 0.41
DDX55-202ENST00000354291 CDR2LQ86X02 465 aaPredicted RBP17.62■□□□□ 0.41
DDX55-202ENST00000354291 C12orf50Q8NA57 414 aaPredicted RBP17.62■□□□□ 0.41
DDX55-202ENST00000354291 TBCKQ8TEA7 893 aa17.62■□□□□ 0.41
DDX55-202ENST00000354291 IER2Q9BTL4 223 aa17.62■□□□□ 0.41
DDX55-202ENST00000354291 TRMT61BQ9BVS5 477 aaKnown RBP17.62■□□□□ 0.41
DDX55-202ENST00000354291 SLKQ9H2G2 1235 aaPredicted RBP17.62■□□□□ 0.41
DDX55-202ENST00000354291 DHX33Q9H6R0 707 aaKnown RBP17.62■□□□□ 0.41
DDX55-202ENST00000354291 ZMIZ1Q9ULJ6 1067 aa17.62■□□□□ 0.41
DDX55-202ENST00000354291 TDP2O95551 362 aa17.61■□□□□ 0.41
DDX55-202ENST00000354291 CEBPBP17676 345 aa17.61■□□□□ 0.41
DDX55-202ENST00000354291 CNR2P34972 360 aa17.61■□□□□ 0.41
DDX55-202ENST00000354291 RFC5P40937 340 aa17.61■□□□□ 0.41
DDX55-202ENST00000354291 QARSP47897 775 aaKnown RBP17.61■□□□□ 0.41
DDX55-202ENST00000354291 AKAP17AQ02040 695 aaKnown RBP17.61■□□□□ 0.41
DDX55-202ENST00000354291 BLOC1S2Q6QNY1 142 aa17.61■□□□□ 0.41
DDX55-202ENST00000354291 FAM160A2Q8N612 972 aaPredicted RBP17.61■□□□□ 0.41
DDX55-202ENST00000354291 TCP11Q8WWU5 503 aa17.61■□□□□ 0.41
DDX55-202ENST00000354291 JAKMIP1Q96N16 626 aaKnown RBP17.61■□□□□ 0.41
DDX55-202ENST00000354291 ZFP14Q9HCL3 533 aa17.61■□□□□ 0.41
DDX55-202ENST00000354291 PIAS3Q9Y6X2 628 aa17.61■□□□□ 0.41
DDX55-202ENST00000354291 C1QTNF9BB2RNN3 333 aa17.6■□□□□ 0.41
DDX55-202ENST00000354291 EML1O00423 815 aa17.6■□□□□ 0.41
DDX55-202ENST00000354291 TM4SF5O14894 197 aa17.6■□□□□ 0.41
DDX55-202ENST00000354291 PRPF3O43395 683 aaKnown RBP17.6■□□□□ 0.41
DDX55-202ENST00000354291 KIF4AO95239 1232 aa17.6■□□□□ 0.41
DDX55-202ENST00000354291 NPTXRO95502 500 aa17.6■□□□□ 0.41
DDX55-202ENST00000354291 POU2F2P09086 479 aa17.6■□□□□ 0.41
DDX55-202ENST00000354291 C1QTNF9P0C862 333 aa17.6■□□□□ 0.41
DDX55-202ENST00000354291 PSMA5P28066 241 aa17.6■□□□□ 0.41
DDX55-202ENST00000354291 GDI1P31150 447 aa17.6■□□□□ 0.41
DDX55-202ENST00000354291 PTENP60484 403 aa17.6■□□□□ 0.41
DDX55-202ENST00000354291 RAB33AQ14088 237 aa17.6■□□□□ 0.41
DDX55-202ENST00000354291 Q6ZUG5 572 aa17.6■□□□□ 0.41
DDX55-202ENST00000354291 LONP2Q86WA8 852 aa17.6■□□□□ 0.41
DDX55-202ENST00000354291 FBXL16Q8N461 479 aa17.6■□□□□ 0.41
DDX55-202ENST00000354291 IRF7Q92985 503 aa17.6■□□□□ 0.41
DDX55-202ENST00000354291 ARRDC1-AS1Q9H2J1 176 aa17.6■□□□□ 0.41
DDX55-202ENST00000354291 RXFP3Q9NSD7 469 aa17.6■□□□□ 0.41
DDX55-202ENST00000354291 VPS54Q9P1Q0 977 aa17.6■□□□□ 0.41
DDX55-202ENST00000354291 SNX14Q9Y5W7 946 aa17.6■□□□□ 0.41
DDX55-202ENST00000354291 DKC1O60832 514 aaKnown RBP eCLIP17.59■□□□□ 0.41
DDX55-202ENST00000354291 CHRNB1P11230 501 aa17.59■□□□□ 0.41
DDX55-202ENST00000354291 PTPN2P17706 415 aa17.59■□□□□ 0.41
DDX55-202ENST00000354291 ARF4P18085 180 aaPredicted RBP17.59■□□□□ 0.41
DDX55-202ENST00000354291 CCNE1P24864 410 aa17.59■□□□□ 0.41
DDX55-202ENST00000354291 LIMK1P53667 647 aa17.59■□□□□ 0.41
DDX55-202ENST00000354291 TUSC3Q13454 348 aa17.59■□□□□ 0.41
DDX55-202ENST00000354291 GAS6Q14393 721 aa17.59■□□□□ 0.41
DDX55-202ENST00000354291 EMC2Q15006 297 aa17.59■□□□□ 0.41
DDX55-202ENST00000354291 PCBP1Q15365 356 aaKnown RBP eCLIP17.59■□□□□ 0.41
DDX55-202ENST00000354291 FAM78AQ5JUQ0 283 aa17.59■□□□□ 0.41
DDX55-202ENST00000354291 PDXDC1Q6P996 788 aa17.59■□□□□ 0.41
DDX55-202ENST00000354291 SPEM1Q8N4L4 309 aa17.59■□□□□ 0.41
DDX55-202ENST00000354291 BRF1Q92994 677 aa17.59■□□□□ 0.41
DDX55-202ENST00000354291 ZNF334Q9HCZ1 680 aaPredicted RBP17.59■□□□□ 0.41
DDX55-202ENST00000354291 NOTCH4Q99466 2003 aa17.59■□□□□ 0.41
DDX55-202ENST00000354291 TDRD15B5MCY1 1934 aaKnown RBP17.59■□□□□ 0.41
DDX55-202ENST00000354291 IGF2RP11717 2491 aa17.58■□□□□ 0.41
DDX55-202ENST00000354291 EPB41L2O43491 1005 aaKnown RBP17.58■□□□□ 0.4
DDX55-202ENST00000354291 KCNK5O95279 499 aa17.58■□□□□ 0.4
DDX55-202ENST00000354291 CPA1P15085 419 aa17.58■□□□□ 0.4
DDX55-202ENST00000354291 FCARP24071 287 aa17.58■□□□□ 0.4
DDX55-202ENST00000354291 NLRP5P59047 1200 aa17.58■□□□□ 0.4
DDX55-202ENST00000354291 XKR9Q5GH70 373 aa17.58■□□□□ 0.4
DDX55-202ENST00000354291 STPG1Q5TH74 334 aa17.58■□□□□ 0.4
DDX55-202ENST00000354291 UNQ6494/PRO21346Q6UXR6 183 aa17.58■□□□□ 0.4
DDX55-202ENST00000354291 CCDC148Q8NFR7 591 aa17.58■□□□□ 0.4
DDX55-202ENST00000354291 ETNPPLQ8TBG4 499 aa17.58■□□□□ 0.4
DDX55-202ENST00000354291 TCEAL4Q96EI5 215 aa17.58■□□□□ 0.4
DDX55-202ENST00000354291 CORO1BQ9BR76 489 aa17.58■□□□□ 0.4
DDX55-202ENST00000354291 RBM12Q9NTZ6 932 aaKnown RBP17.58■□□□□ 0.4
DDX55-202ENST00000354291 WRAP73Q9P2S5 460 aaPredicted RBP17.58■□□□□ 0.4
DDX55-202ENST00000354291 PPME1Q9Y570 386 aa17.58■□□□□ 0.4
DDX55-202ENST00000354291 CDY1Q9Y6F8 540 aa17.58■□□□□ 0.4
DDX55-202ENST00000354291 LAMA1P25391 3075 aa17.58■□□□□ 0.4
DDX55-202ENST00000354291 CYP3A7-CYP3A51PA0A087WV96 503 aa17.57■□□□□ 0.4
DDX55-202ENST00000354291 NRG2O14511 850 aaPredicted RBP17.57■□□□□ 0.4
DDX55-202ENST00000354291 B4GALT5O43286 388 aa17.57■□□□□ 0.4
DDX55-202ENST00000354291 NEFLP07196 543 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms