RNA–Protein interactions for RNA: ENST00000353909.7

MBD1-205, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-205ENST00000353909 ERVK-5Q9HDB9 667 aa16.73■□□□□ 0.27
MBD1-205ENST00000353909 RBAKQ9NYW8 714 aaPredicted RBP16.73■□□□□ 0.27
MBD1-205ENST00000353909 KCNH4Q9UQ05 1017 aa16.73■□□□□ 0.27
MBD1-205ENST00000353909 LRRC37A2A6NM11 1700 aa16.72■□□□□ 0.27
MBD1-205ENST00000353909 GOLGA6BA6NDN3 693 aa16.72■□□□□ 0.27
MBD1-205ENST00000353909 CXCL11O14625 94 aa16.72■□□□□ 0.27
MBD1-205ENST00000353909 CYP2C8P10632 490 aa16.72■□□□□ 0.27
MBD1-205ENST00000353909 TNFRSF8P28908 595 aa16.72■□□□□ 0.27
MBD1-205ENST00000353909 SSTR3P32745 418 aaPredicted RBP16.72■□□□□ 0.27
MBD1-205ENST00000353909 TNFSF9P41273 254 aa16.72■□□□□ 0.27
MBD1-205ENST00000353909 PDE6CP51160 858 aa16.72■□□□□ 0.27
MBD1-205ENST00000353909 CLDN10P78369 228 aa16.72■□□□□ 0.27
MBD1-205ENST00000353909 RHOT2Q8IXI1 618 aa16.72■□□□□ 0.27
MBD1-205ENST00000353909 VTI1AQ96AJ9 217 aa16.72■□□□□ 0.27
MBD1-205ENST00000353909 RNPC3Q96LT9 517 aaKnown RBP16.72■□□□□ 0.27
MBD1-205ENST00000353909 GPR20Q99678 358 aa16.72■□□□□ 0.27
MBD1-205ENST00000353909 MAF1Q9H063 256 aa16.72■□□□□ 0.27
MBD1-205ENST00000353909 APOBEC3GQ9HC16 384 aaKnown RBP16.72■□□□□ 0.27
MBD1-205ENST00000353909 NRBP2Q9NSY0 501 aa16.72■□□□□ 0.27
MBD1-205ENST00000353909 A0A0B4J269 797 aa16.72■□□□□ 0.27
MBD1-205ENST00000353909 ZBTB42B2RXF5 422 aa16.72■□□□□ 0.27
MBD1-205ENST00000353909 CFHP08603 1231 aa16.72■□□□□ 0.27
MBD1-205ENST00000353909 SRGAP2CP0DJJ0 459 aa16.72■□□□□ 0.27
MBD1-205ENST00000353909 GPAT2Q6NUI2 795 aa16.72■□□□□ 0.27
MBD1-205ENST00000353909 EMBQ6PCB8 327 aa16.72■□□□□ 0.27
MBD1-205ENST00000353909 USP37Q86T82 979 aa16.72■□□□□ 0.27
MBD1-205ENST00000353909 RUBCNQ92622 972 aa16.72■□□□□ 0.27
MBD1-205ENST00000353909 FAM204AQ9H8W3 233 aa16.72■□□□□ 0.27
MBD1-205ENST00000353909 MED4Q9NPJ6 270 aa16.72■□□□□ 0.27
MBD1-205ENST00000353909 UMODL1Q5DID0 1318 aa16.72■□□□□ 0.27
MBD1-205ENST00000353909 H0YCG3 227 aa16.71■□□□□ 0.27
MBD1-205ENST00000353909 MAFO75444 373 aaPredicted RBP16.71■□□□□ 0.27
MBD1-205ENST00000353909 TGFB3P10600 412 aa16.71■□□□□ 0.27
MBD1-205ENST00000353909 GZMAP12544 262 aa16.71■□□□□ 0.27
MBD1-205ENST00000353909 COMTP21964 271 aa16.71■□□□□ 0.27
MBD1-205ENST00000353909 ECHS1P30084 290 aa16.71■□□□□ 0.27
MBD1-205ENST00000353909 GJC2Q5T442 439 aaPredicted RBP16.71■□□□□ 0.27
MBD1-205ENST00000353909 ZBTB33Q86T24 672 aa16.71■□□□□ 0.27
MBD1-205ENST00000353909 NEUROG2Q9H2A3 272 aa16.71■□□□□ 0.27
MBD1-205ENST00000353909 ACBD3Q9H3P7 528 aa16.71■□□□□ 0.27
MBD1-205ENST00000353909 DNAH12Q6ZR08 3092 aa16.71■□□□□ 0.27
MBD1-205ENST00000353909 TTI1O43156 1089 aa16.71■□□□□ 0.27
MBD1-205ENST00000353909 ADCY3O60266 1144 aa16.71■□□□□ 0.27
MBD1-205ENST00000353909 EPHX2P34913 555 aa16.71■□□□□ 0.27
MBD1-205ENST00000353909 GCNT1Q02742 428 aa16.71■□□□□ 0.27
MBD1-205ENST00000353909 AFAP1L1Q8TED9 768 aa16.71■□□□□ 0.27
MBD1-205ENST00000353909 NUP85Q9BW27 656 aa16.71■□□□□ 0.27
MBD1-205ENST00000353909 TRIM7Q9C029 511 aa16.71■□□□□ 0.27
MBD1-205ENST00000353909 EFCC1Q9HA90 598 aa16.71■□□□□ 0.27
MBD1-205ENST00000353909 C1orf112Q9NSG2 853 aa16.71■□□□□ 0.27
MBD1-205ENST00000353909 TRPC6Q9Y210 931 aa16.71■□□□□ 0.27
MBD1-205ENST00000353909 ADGRA2Q96PE1 1338 aa16.71■□□□□ 0.27
MBD1-205ENST00000353909 DNAJC25-GNG10A0A024R161 153 aa16.7■□□□□ 0.26
MBD1-205ENST00000353909 PIGRP01833 764 aa16.7■□□□□ 0.26
MBD1-205ENST00000353909 PIK3CAP42336 1068 aa16.7■□□□□ 0.26
MBD1-205ENST00000353909 LMAN1P49257 510 aa16.7■□□□□ 0.26
MBD1-205ENST00000353909 LLGL1Q15334 1064 aa16.7■□□□□ 0.26
MBD1-205ENST00000353909 EAPPQ56P03 285 aaPredicted RBP16.7■□□□□ 0.26
MBD1-205ENST00000353909 FAM160B1Q5W0V3 765 aa16.7■□□□□ 0.26
MBD1-205ENST00000353909 CAVIN3Q969G5 261 aa16.7■□□□□ 0.26
MBD1-205ENST00000353909 ZNF653Q96CK0 615 aa16.7■□□□□ 0.26
MBD1-205ENST00000353909 CALR3Q96L12 384 aaKnown RBP16.7■□□□□ 0.26
MBD1-205ENST00000353909 AZI2Q9H6S1 392 aa16.7■□□□□ 0.26
MBD1-205ENST00000353909 HADHBP55084 474 aaKnown RBP16.7■□□□□ 0.26
MBD1-205ENST00000353909 PPIL2Q13356 520 aa16.7■□□□□ 0.26
MBD1-205ENST00000353909 KCTD2Q14681 263 aa16.7■□□□□ 0.26
MBD1-205ENST00000353909 CELF3Q5SZQ8 465 aaKnown RBP16.7■□□□□ 0.26
MBD1-205ENST00000353909 CDR2LQ86X02 465 aaPredicted RBP16.7■□□□□ 0.26
MBD1-205ENST00000353909 ZDHHC14Q8IZN3 488 aa16.7■□□□□ 0.26
MBD1-205ENST00000353909 CPA5Q8WXQ8 436 aa16.7■□□□□ 0.26
MBD1-205ENST00000353909 MMP19Q99542 508 aa16.7■□□□□ 0.26
MBD1-205ENST00000353909 CNTNAP2Q9UHC6 1331 aa16.7■□□□□ 0.26
MBD1-205ENST00000353909 EVPLQ92817 2033 aa16.7■□□□□ 0.26
MBD1-205ENST00000353909 NOP56O00567 594 aaKnown RBP16.69■□□□□ 0.26
MBD1-205ENST00000353909 MSCO60682 206 aa16.69■□□□□ 0.26
MBD1-205ENST00000353909 NF2P35240 595 aa16.69■□□□□ 0.26
MBD1-205ENST00000353909 RFC5P40937 340 aa16.69■□□□□ 0.26
MBD1-205ENST00000353909 RNF149Q8NC42 400 aa16.69■□□□□ 0.26
MBD1-205ENST00000353909 ZNF564Q8TBZ8 553 aaPredicted RBP16.69■□□□□ 0.26
MBD1-205ENST00000353909 CARD9Q9H257 536 aa16.69■□□□□ 0.26
MBD1-205ENST00000353909 KIAA1586Q9HCI6 787 aa16.69■□□□□ 0.26
MBD1-205ENST00000353909 SIP14410 1827 aa16.69■□□□□ 0.26
MBD1-205ENST00000353909 CLSTN1O94985 981 aa16.69■□□□□ 0.26
MBD1-205ENST00000353909 LAMTOR4Q0VGL1 99 aa16.69■□□□□ 0.26
MBD1-205ENST00000353909 PAK2Q13177 524 aa16.69■□□□□ 0.26
MBD1-205ENST00000353909 HLTFQ14527 1009 aaKnown RBP eCLIP16.69■□□□□ 0.26
MBD1-205ENST00000353909 SPATA33Q96N06 139 aa16.69■□□□□ 0.26
MBD1-205ENST00000353909 NUB1Q9Y5A7 615 aa16.69■□□□□ 0.26
MBD1-205ENST00000353909 SLC25A27O95847 323 aa16.69■□□□□ 0.26
MBD1-205ENST00000353909 CST3P01034 146 aaPredicted RBP16.69■□□□□ 0.26
MBD1-205ENST00000353909 POU5F1Q01860 360 aaKnown RBP16.69■□□□□ 0.26
MBD1-205ENST00000353909 MKRN3Q13064 507 aaKnown RBP16.69■□□□□ 0.26
MBD1-205ENST00000353909 CCDC62Q6P9F0 684 aa16.69■□□□□ 0.26
MBD1-205ENST00000353909 EXOC4Q96A65 974 aa16.69■□□□□ 0.26
MBD1-205ENST00000353909 ZIM3Q96PE6 472 aa16.69■□□□□ 0.26
MBD1-205ENST00000353909 TRIM51Q9BSJ1 452 aa16.69■□□□□ 0.26
MBD1-205ENST00000353909 TCHPQ9BT92 498 aa16.69■□□□□ 0.26
MBD1-205ENST00000353909 CLDN3O15551 220 aa16.68■□□□□ 0.26
MBD1-205ENST00000353909 DAPK3O43293 454 aa16.68■□□□□ 0.26
MBD1-205ENST00000353909 FAM189A1O60320 539 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms