RNA–Protein interactions for RNA: ENST00000353578.8

COL6A3-203, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5 BASIC

Gene COL6A3, Length 9,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-203ENST00000353578 TRIM73Q86UV7 250 aa13.26□□□□□ -0.29
COL6A3-203ENST00000353578 SUN5Q8TC36 379 aa13.26□□□□□ -0.29
COL6A3-203ENST00000353578 GLMNQ92990 594 aa13.26□□□□□ -0.29
COL6A3-203ENST00000353578 VPS54Q9P1Q0 977 aa13.26□□□□□ -0.29
COL6A3-203ENST00000353578 BTBD3Q9Y2F9 522 aa13.26□□□□□ -0.29
COL6A3-203ENST00000353578 CLIC4Q9Y696 253 aa13.26□□□□□ -0.29
COL6A3-203ENST00000353578 ADGRL2O95490 1459 aa13.26□□□□□ -0.29
COL6A3-203ENST00000353578 CPA1P15085 419 aa13.26□□□□□ -0.29
COL6A3-203ENST00000353578 TNFRSF8P28908 595 aa13.26□□□□□ -0.29
COL6A3-203ENST00000353578 RAD23AP54725 363 aa13.26□□□□□ -0.29
COL6A3-203ENST00000353578 DYMQ7RTS9 669 aa13.26□□□□□ -0.29
COL6A3-203ENST00000353578 GINM1Q9NU53 330 aa13.26□□□□□ -0.29
COL6A3-203ENST00000353578 ATP7BP35670 1465 aa13.26□□□□□ -0.29
COL6A3-203ENST00000353578 MFSD4BQ5TF39 518 aa13.25□□□□□ -0.29
COL6A3-203ENST00000353578 E4F1Q66K89 784 aaPredicted RBP13.25□□□□□ -0.29
COL6A3-203ENST00000353578 KLHL3Q9UH77 587 aa13.25□□□□□ -0.29
COL6A3-203ENST00000353578 NCOA3Q9Y6Q9 1424 aa13.25□□□□□ -0.29
COL6A3-203ENST00000353578 CNTFP26441 200 aa13.25□□□□□ -0.29
COL6A3-203ENST00000353578 SLC1A4P43007 532 aa13.25□□□□□ -0.29
COL6A3-203ENST00000353578 RHOT1Q8IXI2 618 aa13.25□□□□□ -0.29
COL6A3-203ENST00000353578 RNPEPL1Q9HAU8 725 aa13.25□□□□□ -0.29
COL6A3-203ENST00000353578 IFNAR1P17181 557 aa13.25□□□□□ -0.29
COL6A3-203ENST00000353578 POLGP54098 1239 aaPredicted RBP13.25□□□□□ -0.29
COL6A3-203ENST00000353578 EGFL6Q8IUX8 553 aa13.25□□□□□ -0.29
COL6A3-203ENST00000353578 CES2O00748 559 aa13.25□□□□□ -0.29
COL6A3-203ENST00000353578 ZNF18P17022 549 aa13.25□□□□□ -0.29
COL6A3-203ENST00000353578 CCT3P49368 545 aaKnown RBP13.25□□□□□ -0.29
COL6A3-203ENST00000353578 UNC13DQ70J99 1090 aa13.25□□□□□ -0.29
COL6A3-203ENST00000353578 CDKL3Q8IVW4 592 aaPredicted RBP13.25□□□□□ -0.29
COL6A3-203ENST00000353578 ZKSCAN4Q969J2 545 aaPredicted RBP13.25□□□□□ -0.29
COL6A3-203ENST00000353578 RUBCNLQ9H714 662 aa13.25□□□□□ -0.29
COL6A3-203ENST00000353578 LRRC8DQ7L1W4 858 aa13.25□□□□□ -0.29
COL6A3-203ENST00000353578 RNPC3Q96LT9 517 aaKnown RBP13.25□□□□□ -0.29
COL6A3-203ENST00000353578 BDH2Q9BUT1 245 aa13.25□□□□□ -0.29
COL6A3-203ENST00000353578 ERAP1Q9NZ08 941 aa13.25□□□□□ -0.29
COL6A3-203ENST00000353578 WHRNQ9P202 907 aa13.25□□□□□ -0.29
COL6A3-203ENST00000353578 ING4Q9UNL4 249 aa13.25□□□□□ -0.29
COL6A3-203ENST00000353578 MXI1P50539 228 aa13.25□□□□□ -0.29
COL6A3-203ENST00000353578 SIRT1Q96EB6 747 aa13.25□□□□□ -0.29
COL6A3-203ENST00000353578 ST7Q9NRC1 585 aa13.25□□□□□ -0.29
COL6A3-203ENST00000353578 TAGLN3Q9UI15 199 aa13.25□□□□□ -0.29
COL6A3-203ENST00000353578 TULP2O00295 520 aa13.25□□□□□ -0.29
COL6A3-203ENST00000353578 CHL1O00533 1208 aa13.25□□□□□ -0.29
COL6A3-203ENST00000353578 PDCD10Q9BUL8 212 aa13.25□□□□□ -0.29
COL6A3-203ENST00000353578 PCDHB4Q9Y5E5 795 aa13.25□□□□□ -0.29
COL6A3-203ENST00000353578 MROH7Q68CQ1 1323 aa13.25□□□□□ -0.29
COL6A3-203ENST00000353578 PHF20L1A8MW92 1017 aa13.25□□□□□ -0.29
COL6A3-203ENST00000353578 S100A6P06703 90 aa13.25□□□□□ -0.29
COL6A3-203ENST00000353578 GRK2P25098 689 aa13.25□□□□□ -0.29
COL6A3-203ENST00000353578 AKAP14Q86UN6 197 aa13.25□□□□□ -0.29
COL6A3-203ENST00000353578 DEPTORQ8TB45 409 aa13.25□□□□□ -0.29
COL6A3-203ENST00000353578 FAF2Q96CS3 445 aa13.25□□□□□ -0.29
COL6A3-203ENST00000353578 SLC39A2Q9NP94 309 aa13.25□□□□□ -0.29
COL6A3-203ENST00000353578 RRN3Q9NYV6 651 aa13.25□□□□□ -0.29
COL6A3-203ENST00000353578 IP6K2Q9UHH9 426 aa13.25□□□□□ -0.29
COL6A3-203ENST00000353578 ADGRA2Q96PE1 1338 aa13.25□□□□□ -0.29
COL6A3-203ENST00000353578 ANKRD65E5RJM6 399 aa13.24□□□□□ -0.29
COL6A3-203ENST00000353578 NPR3P17342 541 aa13.24□□□□□ -0.29
COL6A3-203ENST00000353578 CENPCQ03188 943 aa13.24□□□□□ -0.29
COL6A3-203ENST00000353578 NELFCDQ8IXH7 590 aa13.24□□□□□ -0.29
COL6A3-203ENST00000353578 DMTF1Q9Y222 760 aa13.24□□□□□ -0.29
COL6A3-203ENST00000353578 HADHAP40939 763 aa13.24□□□□□ -0.29
COL6A3-203ENST00000353578 OASLQ15646 514 aaKnown RBP13.24□□□□□ -0.29
COL6A3-203ENST00000353578 TRMT6Q9UJA5 497 aaKnown RBP13.24□□□□□ -0.29
COL6A3-203ENST00000353578 THRAP10827 490 aa13.24□□□□□ -0.29
COL6A3-203ENST00000353578 SESN2P58004 480 aaPredicted RBP13.24□□□□□ -0.29
COL6A3-203ENST00000353578 ZNF827Q17R98 1081 aa13.24□□□□□ -0.29
COL6A3-203ENST00000353578 KCTD17Q8N5Z5 321 aa13.24□□□□□ -0.29
COL6A3-203ENST00000353578 LPIN2Q92539 896 aa13.24□□□□□ -0.29
COL6A3-203ENST00000353578 SLC12A6Q9UHW9 1150 aa13.24□□□□□ -0.29
COL6A3-203ENST00000353578 LAMC3Q9Y6N6 1575 aa13.24□□□□□ -0.29
COL6A3-203ENST00000353578 SAT1P21673 171 aa13.24□□□□□ -0.29
COL6A3-203ENST00000353578 GPATCH4Q5T3I0 446 aaKnown RBP13.24□□□□□ -0.29
COL6A3-203ENST00000353578 PAGE5Q96GU1 130 aa13.24□□□□□ -0.29
COL6A3-203ENST00000353578 METTL5Q9NRN9 209 aaKnown RBP13.24□□□□□ -0.29
COL6A3-203ENST00000353578 GTSE1Q9NYZ3 720 aa13.24□□□□□ -0.29
COL6A3-203ENST00000353578 RAB21Q9UL25 225 aa13.24□□□□□ -0.29
COL6A3-203ENST00000353578 B2RBV5 119 aa13.24□□□□□ -0.29
COL6A3-203ENST00000353578 CCDC130P13994 396 aa13.24□□□□□ -0.29
COL6A3-203ENST00000353578 LCORLQ8N3X6 602 aa13.24□□□□□ -0.29
COL6A3-203ENST00000353578 ZNF398Q8TD17 642 aa13.24□□□□□ -0.29
COL6A3-203ENST00000353578 TEX13BQ9BXU2 312 aa13.24□□□□□ -0.29
COL6A3-203ENST00000353578 ABCA9Q8IUA7 1624 aa13.24□□□□□ -0.29
COL6A3-203ENST00000353578 MFN2O95140 757 aa13.24□□□□□ -0.29
COL6A3-203ENST00000353578 TTC39BQ5VTQ0 682 aaPredicted RBP13.24□□□□□ -0.29
COL6A3-203ENST00000353578 TRMT2AQ8IZ69 625 aaKnown RBP13.24□□□□□ -0.29
COL6A3-203ENST00000353578 PGBD1Q96JS3 809 aa13.24□□□□□ -0.29
COL6A3-203ENST00000353578 TBC1D7Q9P0N9 293 aa13.24□□□□□ -0.29
COL6A3-203ENST00000353578 MAPRE3Q9UPY8 281 aa13.24□□□□□ -0.29
COL6A3-203ENST00000353578 CDC42BPAQ5VT25 1732 aa13.24□□□□□ -0.29
COL6A3-203ENST00000353578 COG2Q14746 738 aa13.24□□□□□ -0.29
COL6A3-203ENST00000353578 TAGAPQ8N103 731 aa13.24□□□□□ -0.29
COL6A3-203ENST00000353578 PLBD2Q8NHP8 589 aa13.24□□□□□ -0.29
COL6A3-203ENST00000353578 SKAP2O75563 359 aaPredicted RBP13.24□□□□□ -0.29
COL6A3-203ENST00000353578 CHN2P52757 468 aa13.24□□□□□ -0.29
COL6A3-203ENST00000353578 LBRQ14739 615 aaKnown RBP13.24□□□□□ -0.29
COL6A3-203ENST00000353578 ACAP2Q15057 778 aa13.24□□□□□ -0.29
COL6A3-203ENST00000353578 IZUMO2Q6UXV1 221 aa13.24□□□□□ -0.29
COL6A3-203ENST00000353578 NLRX1Q86UT6 975 aa13.24□□□□□ -0.29
COL6A3-203ENST00000353578 NMD3Q96D46 503 aaKnown RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms