RNA–Protein interactions for RNA: ENST00000353414.8

COL11A1-201, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-201ENST00000353414 IFNEQ86WN2 208 aa10.54□□□□□ -0.72
COL11A1-201ENST00000353414 APPL2Q8NEU8 664 aa10.54□□□□□ -0.72
COL11A1-201ENST00000353414 CELF1Q92879 486 aaKnown RBP10.54□□□□□ -0.72
COL11A1-201ENST00000353414 C17orf80Q9BSJ5 609 aa10.54□□□□□ -0.72
COL11A1-201ENST00000353414 MARCOQ9UEW3 520 aaPredicted RBP10.54□□□□□ -0.72
COL11A1-201ENST00000353414 EFCAB14O75071 495 aa10.54□□□□□ -0.72
COL11A1-201ENST00000353414 HNRNPCP07910 306 aaKnown RBP eCLIP10.54□□□□□ -0.72
COL11A1-201ENST00000353414 KIF23Q02241 960 aaPredicted RBP10.54□□□□□ -0.72
COL11A1-201ENST00000353414 FUT11Q495W5 492 aa10.54□□□□□ -0.72
COL11A1-201ENST00000353414 HIBCHQ6NVY1 386 aaPredicted RBP10.54□□□□□ -0.72
COL11A1-201ENST00000353414 BTNL9Q6UXG8 535 aa10.54□□□□□ -0.72
COL11A1-201ENST00000353414 DMAP1Q9NPF5 467 aaPredicted RBP10.54□□□□□ -0.72
COL11A1-201ENST00000353414 CHORDC1Q9UHD1 332 aaPredicted RBP10.54□□□□□ -0.72
COL11A1-201ENST00000353414 MINPP1Q9UNW1 487 aa10.54□□□□□ -0.72
COL11A1-201ENST00000353414 NR1D1P20393 614 aa10.54□□□□□ -0.72
COL11A1-201ENST00000353414 NCALDP61601 193 aa10.54□□□□□ -0.72
COL11A1-201ENST00000353414 SCARF1Q14162 830 aa10.54□□□□□ -0.72
COL11A1-201ENST00000353414 WDR75Q8IWA0 830 aaKnown RBP10.54□□□□□ -0.72
COL11A1-201ENST00000353414 SSH3Q8TE77 659 aa10.54□□□□□ -0.72
COL11A1-201ENST00000353414 DCAF4Q8WV16 495 aa10.54□□□□□ -0.72
COL11A1-201ENST00000353414 HES6Q96HZ4 224 aa10.54□□□□□ -0.72
COL11A1-201ENST00000353414 SCUBE2Q9NQ36 999 aa10.54□□□□□ -0.72
COL11A1-201ENST00000353414 HDAC6Q9UBN7 1215 aa10.54□□□□□ -0.72
COL11A1-201ENST00000353414 MYOM2P54296 1465 aa10.54□□□□□ -0.72
COL11A1-201ENST00000353414 ENO1P06733 434 aaKnown RBP10.54□□□□□ -0.72
COL11A1-201ENST00000353414 PRCPP42785 496 aa10.54□□□□□ -0.72
COL11A1-201ENST00000353414 ALDH1A3P47895 512 aa10.54□□□□□ -0.72
COL11A1-201ENST00000353414 KCNH2Q12809 1159 aa10.54□□□□□ -0.72
COL11A1-201ENST00000353414 SPARCL1Q14515 664 aa10.54□□□□□ -0.72
COL11A1-201ENST00000353414 NCAPHQ15003 741 aa10.54□□□□□ -0.72
COL11A1-201ENST00000353414 GLRA4Q5JXX5 417 aa10.54□□□□□ -0.72
COL11A1-201ENST00000353414 C6orf10Q5SRN2 563 aa10.54□□□□□ -0.72
COL11A1-201ENST00000353414 PPP1R18Q6NYC8 613 aa10.54□□□□□ -0.72
COL11A1-201ENST00000353414 ICA1LQ8NDH6 482 aa10.54□□□□□ -0.72
COL11A1-201ENST00000353414 NEK9Q8TD19 979 aa10.54□□□□□ -0.72
COL11A1-201ENST00000353414 CYGBQ8WWM9 190 aa10.54□□□□□ -0.72
COL11A1-201ENST00000353414 MS4A14Q96JA4 679 aa10.54□□□□□ -0.72
COL11A1-201ENST00000353414 TSC22D3Q99576 134 aa10.54□□□□□ -0.72
COL11A1-201ENST00000353414 TMEM47Q9BQJ4 181 aa10.54□□□□□ -0.72
COL11A1-201ENST00000353414 BRD8Q9H0E9 1235 aa10.54□□□□□ -0.72
COL11A1-201ENST00000353414 AGO2Q9UKV8 859 aaKnown RBP10.54□□□□□ -0.72
COL11A1-201ENST00000353414 CYP26A1O43174 497 aa10.54□□□□□ -0.72
COL11A1-201ENST00000353414 CDC16Q13042 620 aa10.54□□□□□ -0.72
COL11A1-201ENST00000353414 DRAP1Q14919 205 aaPredicted RBP10.54□□□□□ -0.72
COL11A1-201ENST00000353414 PLA2G4FQ68DD2 849 aa10.54□□□□□ -0.72
COL11A1-201ENST00000353414 SLC7A14Q8TBB6 771 aa10.54□□□□□ -0.72
COL11A1-201ENST00000353414 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.54□□□□□ -0.72
COL11A1-201ENST00000353414 EMSYQ7Z589 1322 aa10.54□□□□□ -0.72
COL11A1-201ENST00000353414 IPO5O00410 1097 aaKnown RBP10.54□□□□□ -0.72
COL11A1-201ENST00000353414 IGFBP4P22692 258 aa10.54□□□□□ -0.72
COL11A1-201ENST00000353414 YWHABP31946 246 aaKnown RBP10.54□□□□□ -0.72
COL11A1-201ENST00000353414 SEZ6Q53EL9 994 aa10.54□□□□□ -0.72
COL11A1-201ENST00000353414 ANGEL2Q5VTE6 544 aaKnown RBP10.54□□□□□ -0.72
COL11A1-201ENST00000353414 NFRKBQ6P4R8 1299 aa10.54□□□□□ -0.72
COL11A1-201ENST00000353414 BRINP3Q76B58 766 aa10.54□□□□□ -0.72
COL11A1-201ENST00000353414 DGKHQ86XP1 1220 aa10.54□□□□□ -0.72
COL11A1-201ENST00000353414 TMEM35BQ8NCS4 154 aa10.54□□□□□ -0.72
COL11A1-201ENST00000353414 NFKBIZQ9BYH8 718 aa10.54□□□□□ -0.72
COL11A1-201ENST00000353414 LSM7Q9UK45 103 aaKnown RBP10.54□□□□□ -0.72
COL11A1-201ENST00000353414 PRR12Q9ULL5 1215 aa10.54□□□□□ -0.72
COL11A1-201ENST00000353414 HECW2Q9P2P5 1572 aa10.54□□□□□ -0.72
COL11A1-201ENST00000353414 MAP3K6O95382 1288 aa10.53□□□□□ -0.72
COL11A1-201ENST00000353414 LRG1P02750 347 aa10.53□□□□□ -0.72
COL11A1-201ENST00000353414 DARSP14868 501 aaKnown RBP10.53□□□□□ -0.72
COL11A1-201ENST00000353414 TYK2P29597 1187 aa10.53□□□□□ -0.72
COL11A1-201ENST00000353414 GPC5P78333 572 aa10.53□□□□□ -0.72
COL11A1-201ENST00000353414 C10orf120Q5SQS8 335 aa10.53□□□□□ -0.72
COL11A1-201ENST00000353414 ERAP2Q6P179 960 aa10.53□□□□□ -0.72
COL11A1-201ENST00000353414 CENPTQ96BT3 561 aa10.53□□□□□ -0.72
COL11A1-201ENST00000353414 FOPNLQ96NB1 174 aa10.53□□□□□ -0.72
COL11A1-201ENST00000353414 BSDC1Q9NW68 430 aaPredicted RBP10.53□□□□□ -0.72
COL11A1-201ENST00000353414 SPASTQ9UBP0 616 aa10.53□□□□□ -0.72
COL11A1-201ENST00000353414 PRG3Q9Y2Y8 225 aaPredicted RBP10.53□□□□□ -0.72
COL11A1-201ENST00000353414 ZMYM4Q5VZL5 1548 aa10.53□□□□□ -0.72
COL11A1-201ENST00000353414 NEO1Q92859 1461 aa10.53□□□□□ -0.72
COL11A1-201ENST00000353414 RPS6KA5O75582 802 aa10.53□□□□□ -0.72
COL11A1-201ENST00000353414 FKBP9O95302 570 aa10.53□□□□□ -0.72
COL11A1-201ENST00000353414 TDP2O95551 362 aa10.53□□□□□ -0.72
COL11A1-201ENST00000353414 ARSEP51690 589 aa10.53□□□□□ -0.72
COL11A1-201ENST00000353414 BCAR1P56945 870 aa10.53□□□□□ -0.72
COL11A1-201ENST00000353414 EIF3EP60228 445 aaKnown RBP10.53□□□□□ -0.72
COL11A1-201ENST00000353414 MDM2Q00987 491 aaPredicted RBP10.53□□□□□ -0.72
COL11A1-201ENST00000353414 LAYNQ6UX15 382 aa10.53□□□□□ -0.72
COL11A1-201ENST00000353414 FKBP9P1Q75LS8 142 aa10.53□□□□□ -0.72
COL11A1-201ENST00000353414 SPACA7Q96KW9 195 aa10.53□□□□□ -0.72
COL11A1-201ENST00000353414 LINC00854A0A1B0GVQ3 168 aa10.53□□□□□ -0.72
COL11A1-201ENST00000353414 APRTP07741 180 aa10.53□□□□□ -0.72
COL11A1-201ENST00000353414 MAGOHP61326 146 aaKnown RBP10.53□□□□□ -0.72
COL11A1-201ENST00000353414 CDK17Q00537 523 aa10.53□□□□□ -0.72
COL11A1-201ENST00000353414 STAG2Q8N3U4 1231 aa10.53□□□□□ -0.72
COL11A1-201ENST00000353414 CUEDC2Q9H467 287 aa10.53□□□□□ -0.72
COL11A1-201ENST00000353414 KPNA7A9QM74 516 aa10.53□□□□□ -0.72
COL11A1-201ENST00000353414 KDM1AO60341 852 aa10.53□□□□□ -0.72
COL11A1-201ENST00000353414 NDUFS3O75489 264 aa10.53□□□□□ -0.72
COL11A1-201ENST00000353414 CIAO1O76071 339 aa10.53□□□□□ -0.72
COL11A1-201ENST00000353414 GUCY2CP25092 1073 aa10.53□□□□□ -0.72
COL11A1-201ENST00000353414 ETF1P62495 437 aaKnown RBP10.53□□□□□ -0.72
COL11A1-201ENST00000353414 FOXR1Q6PIV2 292 aa10.53□□□□□ -0.72
COL11A1-201ENST00000353414 USP6NLQ92738 828 aa10.53□□□□□ -0.72
COL11A1-201ENST00000353414 THAP9Q9H5L6 903 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms