RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 STAP1Q9ULZ2 295 aa12.94□□□□□ -0.34
SMAD9-201ENST00000350148 RSPH10B2B2RC85 870 aa12.94□□□□□ -0.34
SMAD9-201ENST00000350148 FZD9O00144 591 aa12.94□□□□□ -0.34
SMAD9-201ENST00000350148 MYO1CO00159 1063 aa12.94□□□□□ -0.34
SMAD9-201ENST00000350148 RSPH10BP0C881 870 aa12.94□□□□□ -0.34
SMAD9-201ENST00000350148 SLC9A1P19634 815 aa12.94□□□□□ -0.34
SMAD9-201ENST00000350148 IQSEC1Q6DN90 963 aa12.94□□□□□ -0.34
SMAD9-201ENST00000350148 NYAP1Q6ZVC0 841 aa12.94□□□□□ -0.34
SMAD9-201ENST00000350148 C1orf186Q6ZWK4 172 aa12.94□□□□□ -0.34
SMAD9-201ENST00000350148 CCDC63Q8NA47 563 aa12.94□□□□□ -0.34
SMAD9-201ENST00000350148 TRIM4Q9C037 500 aa12.94□□□□□ -0.34
SMAD9-201ENST00000350148 ANKRD36CQ5JPF3 1778 aa12.94□□□□□ -0.34
SMAD9-201ENST00000350148 PAPPAQ13219 1627 aa12.94□□□□□ -0.34
SMAD9-201ENST00000350148 NOL3O60936 208 aaKnown RBP12.94□□□□□ -0.34
SMAD9-201ENST00000350148 FGGP02679 453 aa12.94□□□□□ -0.34
SMAD9-201ENST00000350148 PON1P27169 355 aa12.94□□□□□ -0.34
SMAD9-201ENST00000350148 DHX34Q14147 1143 aaKnown RBP12.94□□□□□ -0.34
SMAD9-201ENST00000350148 CEP85LQ5SZL2 805 aa12.94□□□□□ -0.34
SMAD9-201ENST00000350148 GPBP1L1Q9HC44 474 aaPredicted RBP12.94□□□□□ -0.34
SMAD9-201ENST00000350148 C17orf102A2RUQ5 167 aa12.94□□□□□ -0.34
SMAD9-201ENST00000350148 LRRD1A4D1F6 860 aa12.94□□□□□ -0.34
SMAD9-201ENST00000350148 CLK2P49760 499 aaKnown RBP12.94□□□□□ -0.34
SMAD9-201ENST00000350148 TBX2Q13207 712 aaPredicted RBP12.94□□□□□ -0.34
SMAD9-201ENST00000350148 SETDB1Q15047 1291 aa12.94□□□□□ -0.34
SMAD9-201ENST00000350148 FYB2Q5VWT5 728 aa12.94□□□□□ -0.34
SMAD9-201ENST00000350148 TRPM4Q8TD43 1214 aa12.94□□□□□ -0.34
SMAD9-201ENST00000350148 ATP2A3Q93084 1043 aa12.94□□□□□ -0.34
SMAD9-201ENST00000350148 CYP26A1O43174 497 aa12.93□□□□□ -0.34
SMAD9-201ENST00000350148 ARHGAP25P42331 645 aa12.93□□□□□ -0.34
SMAD9-201ENST00000350148 BMT2Q1RMZ1 405 aa12.93□□□□□ -0.34
SMAD9-201ENST00000350148 TRIM65Q6PJ69 517 aa12.93□□□□□ -0.34
SMAD9-201ENST00000350148 AMIGO3Q86WK7 504 aa12.93□□□□□ -0.34
SMAD9-201ENST00000350148 GLIS2Q9BZE0 524 aaPredicted RBP12.93□□□□□ -0.34
SMAD9-201ENST00000350148 TMEM134Q9H6X4 195 aa12.93□□□□□ -0.34
SMAD9-201ENST00000350148 ANAPC5Q9UJX4 755 aa12.93□□□□□ -0.34
SMAD9-201ENST00000350148 ABCA3Q99758 1704 aa12.93□□□□□ -0.34
SMAD9-201ENST00000350148 SPDYE5A6NIY4 337 aa12.93□□□□□ -0.34
SMAD9-201ENST00000350148 KLRC4O43908 158 aa12.93□□□□□ -0.34
SMAD9-201ENST00000350148 CYP2B6P20813 491 aa12.93□□□□□ -0.34
SMAD9-201ENST00000350148 SPATS2Q86XZ4 545 aaKnown RBP12.93□□□□□ -0.34
SMAD9-201ENST00000350148 DUSP9Q99956 384 aaKnown RBP12.93□□□□□ -0.34
SMAD9-201ENST00000350148 C11orf70Q9BRQ4 267 aa12.93□□□□□ -0.34
SMAD9-201ENST00000350148 TACC3Q9Y6A5 838 aa12.93□□□□□ -0.34
SMAD9-201ENST00000350148 ACOT2P49753 483 aa12.93□□□□□ -0.34
SMAD9-201ENST00000350148 COL9A3Q14050 684 aaPredicted RBP12.93□□□□□ -0.34
SMAD9-201ENST00000350148 SV2CQ496J9 727 aa12.93□□□□□ -0.34
SMAD9-201ENST00000350148 ICE2Q659A1 982 aa12.93□□□□□ -0.34
SMAD9-201ENST00000350148 KAZNQ674X7 775 aa12.93□□□□□ -0.34
SMAD9-201ENST00000350148 ELMSAN1Q6PJG2 1045 aa12.93□□□□□ -0.34
SMAD9-201ENST00000350148 NT5DC4Q86YG4 428 aa12.93□□□□□ -0.34
SMAD9-201ENST00000350148 RBBP8NLQ8NC74 664 aaPredicted RBP12.93□□□□□ -0.34
SMAD9-201ENST00000350148 PIN4Q9Y237 131 aaKnown RBP12.93□□□□□ -0.34
SMAD9-201ENST00000350148 A0A0A6YYK5 440 aaPredicted RBP12.93□□□□□ -0.34
SMAD9-201ENST00000350148 SPDYE16A6NNV3 312 aaPredicted RBP12.93□□□□□ -0.34
SMAD9-201ENST00000350148 M0QYV0 167 aa12.93□□□□□ -0.34
SMAD9-201ENST00000350148 ZFXP17010 805 aaPredicted RBP12.93□□□□□ -0.34
SMAD9-201ENST00000350148 ATICP31939 592 aa12.93□□□□□ -0.34
SMAD9-201ENST00000350148 WDR49Q8IV35 697 aa12.93□□□□□ -0.34
SMAD9-201ENST00000350148 SLC9A9Q8IVB4 645 aa12.93□□□□□ -0.34
SMAD9-201ENST00000350148 TARS2Q9BW92 718 aaKnown RBP12.93□□□□□ -0.34
SMAD9-201ENST00000350148 C10orf71Q711Q0 1435 aa12.93□□□□□ -0.34
SMAD9-201ENST00000350148 SNED1Q8TER0 1413 aa12.93□□□□□ -0.34
SMAD9-201ENST00000350148 SLC15A5A6NIM6 579 aa12.92□□□□□ -0.34
SMAD9-201ENST00000350148 SGK1O00141 431 aa12.92□□□□□ -0.34
SMAD9-201ENST00000350148 PRLRP16471 622 aa12.92□□□□□ -0.34
SMAD9-201ENST00000350148 NOP14P78316 857 aaKnown RBP12.92□□□□□ -0.34
SMAD9-201ENST00000350148 MTF1Q14872 753 aa12.92□□□□□ -0.34
SMAD9-201ENST00000350148 PCBP1Q15365 356 aaKnown RBP eCLIP12.92□□□□□ -0.34
SMAD9-201ENST00000350148 SPATA31C2B4DYI2 1134 aa12.92□□□□□ -0.34
SMAD9-201ENST00000350148 GZMAP12544 262 aa12.92□□□□□ -0.34
SMAD9-201ENST00000350148 SDC4P31431 198 aa12.92□□□□□ -0.34
SMAD9-201ENST00000350148 GALCP54803 685 aa12.92□□□□□ -0.34
SMAD9-201ENST00000350148 PSMC1P62191 440 aaKnown RBP12.92□□□□□ -0.34
SMAD9-201ENST00000350148 PSMC6P62333 389 aa12.92□□□□□ -0.34
SMAD9-201ENST00000350148 ZKSCAN8Q15776 578 aaPredicted RBP12.92□□□□□ -0.34
SMAD9-201ENST00000350148 NAA35Q5VZE5 725 aa12.92□□□□□ -0.34
SMAD9-201ENST00000350148 MAP4K3Q8IVH8 894 aa12.92□□□□□ -0.34
SMAD9-201ENST00000350148 PRPF31Q8WWY3 499 aaKnown RBP12.92□□□□□ -0.34
SMAD9-201ENST00000350148 CDKL2Q92772 493 aa12.92□□□□□ -0.34
SMAD9-201ENST00000350148 EML1O00423 815 aa12.92□□□□□ -0.34
SMAD9-201ENST00000350148 C6orf222P0C671 652 aaPredicted RBP12.92□□□□□ -0.34
SMAD9-201ENST00000350148 LIG3P49916 1009 aa12.92□□□□□ -0.34
SMAD9-201ENST00000350148 EVX2Q03828 476 aa12.92□□□□□ -0.34
SMAD9-201ENST00000350148 CYP24A1Q07973 514 aa12.92□□□□□ -0.34
SMAD9-201ENST00000350148 IL17AQ16552 155 aa12.92□□□□□ -0.34
SMAD9-201ENST00000350148 NFIL3Q16649 462 aa12.92□□□□□ -0.34
SMAD9-201ENST00000350148 HHATQ5VTY9 493 aa12.92□□□□□ -0.34
SMAD9-201ENST00000350148 ZNF410Q86VK4 478 aa12.92□□□□□ -0.34
SMAD9-201ENST00000350148 HSD17B14Q9BPX1 270 aa12.92□□□□□ -0.34
SMAD9-201ENST00000350148 TRIM7Q9C029 511 aa12.92□□□□□ -0.34
SMAD9-201ENST00000350148 UBQLN1Q9UMX0 589 aaKnown RBP12.92□□□□□ -0.34
SMAD9-201ENST00000350148 KBTBD13C9JR72 458 aa12.92□□□□□ -0.34
SMAD9-201ENST00000350148 TRAPPC3O43617 180 aa12.92□□□□□ -0.34
SMAD9-201ENST00000350148 KRT15P19012 456 aa12.92□□□□□ -0.34
SMAD9-201ENST00000350148 COG7P83436 770 aa12.92□□□□□ -0.34
SMAD9-201ENST00000350148 RSRC2Q7L4I2 434 aaKnown RBP12.92□□□□□ -0.34
SMAD9-201ENST00000350148 RNF180Q86T96 592 aa12.92□□□□□ -0.34
SMAD9-201ENST00000350148 CYP2W1Q8TAV3 490 aa12.92□□□□□ -0.34
SMAD9-201ENST00000350148 RNF139Q8WU17 664 aa12.92□□□□□ -0.34
SMAD9-201ENST00000350148 PRKAG2Q9UGJ0 569 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms