RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 CCDC22O60826 627 aa11.32□□□□□ -0.6
CAPN3-203ENST00000349748 TFAP2AP05549 437 aa11.32□□□□□ -0.6
CAPN3-203ENST00000349748 SMIM18P0DKX4 95 aa11.32□□□□□ -0.6
CAPN3-203ENST00000349748 ATP6V1B1P15313 513 aa11.32□□□□□ -0.6
CAPN3-203ENST00000349748 WDR4P57081 412 aaKnown RBP11.32□□□□□ -0.6
CAPN3-203ENST00000349748 ATP2C1P98194 919 aaPredicted RBP11.32□□□□□ -0.6
CAPN3-203ENST00000349748 LMNB2Q03252 620 aa11.32□□□□□ -0.6
CAPN3-203ENST00000349748 MED21Q13503 144 aa11.32□□□□□ -0.6
CAPN3-203ENST00000349748 RAPGEF1Q13905 1077 aa11.32□□□□□ -0.6
CAPN3-203ENST00000349748 C10orf82Q8WW14 230 aa11.32□□□□□ -0.6
CAPN3-203ENST00000349748 PRR11Q96HE9 360 aaPredicted RBP11.32□□□□□ -0.6
CAPN3-203ENST00000349748 SLC4A9Q96Q91 983 aa11.32□□□□□ -0.6
CAPN3-203ENST00000349748 KLHL4Q9C0H6 718 aa11.32□□□□□ -0.6
CAPN3-203ENST00000349748 SYNPO2Q9UMS6 1093 aa11.32□□□□□ -0.6
CAPN3-203ENST00000349748 STARD13Q9Y3M8 1113 aa11.32□□□□□ -0.6
CAPN3-203ENST00000349748 NRAPQ86VF7 1730 aa11.32□□□□□ -0.6
CAPN3-203ENST00000349748 ATRNO75882 1429 aa11.32□□□□□ -0.6
CAPN3-203ENST00000349748 TTLL13PA6NNM8 815 aa11.32□□□□□ -0.6
CAPN3-203ENST00000349748 EEF2P13639 858 aaKnown RBP11.32□□□□□ -0.6
CAPN3-203ENST00000349748 ZNF211Q13398 564 aaPredicted RBP11.32□□□□□ -0.6
CAPN3-203ENST00000349748 SMIM5Q71RC9 77 aa11.32□□□□□ -0.6
CAPN3-203ENST00000349748 ANO5Q75V66 913 aa11.32□□□□□ -0.6
CAPN3-203ENST00000349748 NLRP9Q7RTR0 991 aa11.32□□□□□ -0.6
CAPN3-203ENST00000349748 IFNLR1Q8IU57 520 aaPredicted RBP11.32□□□□□ -0.6
CAPN3-203ENST00000349748 RASGEF1CQ8N431 466 aa11.32□□□□□ -0.6
CAPN3-203ENST00000349748 CFAP61Q8NHU2 1237 aa11.32□□□□□ -0.6
CAPN3-203ENST00000349748 C18orf8Q96DM3 657 aa11.32□□□□□ -0.6
CAPN3-203ENST00000349748 GBA3Q9H227 469 aa11.32□□□□□ -0.6
CAPN3-203ENST00000349748 LIN28AQ9H9Z2 209 aaKnown RBP11.32□□□□□ -0.6
CAPN3-203ENST00000349748 NDE1Q9NXR1 346 aa11.32□□□□□ -0.6
CAPN3-203ENST00000349748 CEP126Q9P2H0 1117 aa11.32□□□□□ -0.6
CAPN3-203ENST00000349748 SAP30BPQ9UHR5 308 aaKnown RBP11.32□□□□□ -0.6
CAPN3-203ENST00000349748 DCTN4Q9UJW0 460 aa11.32□□□□□ -0.6
CAPN3-203ENST00000349748 ATP6V0A2Q9Y487 856 aa11.32□□□□□ -0.6
CAPN3-203ENST00000349748 TELO2Q9Y4R8 837 aa11.32□□□□□ -0.6
CAPN3-203ENST00000349748 PARP4Q9UKK3 1724 aaKnown RBP11.32□□□□□ -0.6
CAPN3-203ENST00000349748 POTEFA5A3E0 1075 aa11.31□□□□□ -0.6
CAPN3-203ENST00000349748 RHOBTB3O94955 611 aa11.31□□□□□ -0.6
CAPN3-203ENST00000349748 POTEIP0CG38 1075 aa11.31□□□□□ -0.6
CAPN3-203ENST00000349748 NAT2P11245 290 aa11.31□□□□□ -0.6
CAPN3-203ENST00000349748 KRT13P13646 458 aa11.31□□□□□ -0.6
CAPN3-203ENST00000349748 ADORA1P30542 326 aa11.31□□□□□ -0.6
CAPN3-203ENST00000349748 KRT2P35908 639 aa11.31□□□□□ -0.6
CAPN3-203ENST00000349748 TUFMP49411 452 aaKnown RBP11.31□□□□□ -0.6
CAPN3-203ENST00000349748 PTENP60484 403 aa11.31□□□□□ -0.6
CAPN3-203ENST00000349748 STRN3Q13033 797 aa11.31□□□□□ -0.6
CAPN3-203ENST00000349748 UBE4AQ14139 1066 aa11.31□□□□□ -0.6
CAPN3-203ENST00000349748 GRM2Q14416 872 aa11.31□□□□□ -0.6
CAPN3-203ENST00000349748 CYTH1Q15438 398 aa11.31□□□□□ -0.6
CAPN3-203ENST00000349748 TGFBIQ15582 683 aa11.31□□□□□ -0.6
CAPN3-203ENST00000349748 INAQ16352 499 aa11.31□□□□□ -0.6
CAPN3-203ENST00000349748 MYLK3Q32MK0 819 aa11.31□□□□□ -0.6
CAPN3-203ENST00000349748 SFT2D3Q587I9 215 aa11.31□□□□□ -0.6
CAPN3-203ENST00000349748 FAM83BQ5T0W9 1011 aa11.31□□□□□ -0.6
CAPN3-203ENST00000349748 ARHGEF18Q6ZSZ5 1173 aa11.31□□□□□ -0.6
CAPN3-203ENST00000349748 CROCCP2Q86T23 111 aa11.31□□□□□ -0.6
CAPN3-203ENST00000349748 CCDC84Q86UT8 332 aaPredicted RBP11.31□□□□□ -0.6
CAPN3-203ENST00000349748 SGMS1Q86VZ5 419 aa11.31□□□□□ -0.6
CAPN3-203ENST00000349748 SLC25A41Q8N5S1 370 aa11.31□□□□□ -0.6
CAPN3-203ENST00000349748 SCAIQ8N9R8 606 aa11.31□□□□□ -0.6
CAPN3-203ENST00000349748 FAM161BQ96MY7 647 aa11.31□□□□□ -0.6
CAPN3-203ENST00000349748 SEMA6BQ9H3T3 888 aa11.31□□□□□ -0.6
CAPN3-203ENST00000349748 ZBTB3Q9H5J0 574 aa11.31□□□□□ -0.6
CAPN3-203ENST00000349748 KANSL2Q9H9L4 492 aa11.31□□□□□ -0.6
CAPN3-203ENST00000349748 EMILIN3Q9NT22 766 aa11.31□□□□□ -0.6
CAPN3-203ENST00000349748 ZSWIM5Q9P217 1185 aa11.31□□□□□ -0.6
CAPN3-203ENST00000349748 SH3PXD2BA1X283 911 aa11.31□□□□□ -0.6
CAPN3-203ENST00000349748 RASA4BC9J798 803 aa11.31□□□□□ -0.6
CAPN3-203ENST00000349748 ANKRD63C9JTQ0 380 aa11.31□□□□□ -0.6
CAPN3-203ENST00000349748 MATN2O00339 956 aa11.31□□□□□ -0.6
CAPN3-203ENST00000349748 ATMINO43313 823 aaPredicted RBP11.31□□□□□ -0.6
CAPN3-203ENST00000349748 RASA4O43374 803 aa11.31□□□□□ -0.6
CAPN3-203ENST00000349748 SPAG7O75391 227 aa11.31□□□□□ -0.6
CAPN3-203ENST00000349748 KPNA1P52294 538 aaPredicted RBP11.31□□□□□ -0.6
CAPN3-203ENST00000349748 PDE4DQ08499 809 aa11.31□□□□□ -0.6
CAPN3-203ENST00000349748 KLHL30Q0D2K2 578 aa11.31□□□□□ -0.6
CAPN3-203ENST00000349748 SCARF1Q14162 830 aa11.31□□□□□ -0.6
CAPN3-203ENST00000349748 C16orf72Q14CZ0 275 aa11.31□□□□□ -0.6
CAPN3-203ENST00000349748 LRRC15Q8TF66 581 aa11.31□□□□□ -0.6
CAPN3-203ENST00000349748 TMEM87BQ96K49 555 aa11.31□□□□□ -0.6
CAPN3-203ENST00000349748 EPB41L1Q9H4G0 881 aa11.31□□□□□ -0.6
CAPN3-203ENST00000349748 NPHS2Q9NP85 383 aa11.31□□□□□ -0.6
CAPN3-203ENST00000349748 NDUFA13Q9P0J0 144 aa11.31□□□□□ -0.6
CAPN3-203ENST00000349748 MYOCOSA0A1B0GUC4 107 aa11.31□□□□□ -0.6
CAPN3-203ENST00000349748 BICDL2A1A5D9 508 aa11.31□□□□□ -0.6
CAPN3-203ENST00000349748 UNCXA6NJT0 531 aa11.31□□□□□ -0.6
CAPN3-203ENST00000349748 TRMUO75648 421 aaKnown RBP11.31□□□□□ -0.6
CAPN3-203ENST00000349748 PPP1R2P41236 205 aa11.31□□□□□ -0.6
CAPN3-203ENST00000349748 CPA2P48052 419 aa11.31□□□□□ -0.6
CAPN3-203ENST00000349748 PDK3Q15120 406 aa11.31□□□□□ -0.6
CAPN3-203ENST00000349748 PLEKHG4Q58EX7 1191 aa11.31□□□□□ -0.6
CAPN3-203ENST00000349748 FAAH2Q6GMR7 532 aa11.31□□□□□ -0.6
CAPN3-203ENST00000349748 PPP1R2P3Q6NXS1 205 aa11.31□□□□□ -0.6
CAPN3-203ENST00000349748 TMTC3Q6ZXV5 915 aa11.31□□□□□ -0.6
CAPN3-203ENST00000349748 PEX5LQ8IYB4 626 aa11.31□□□□□ -0.6
CAPN3-203ENST00000349748 SYT2Q8N9I0 419 aaPredicted RBP11.31□□□□□ -0.6
CAPN3-203ENST00000349748 OR6Y1Q8NGX8 325 aa11.31□□□□□ -0.6
CAPN3-203ENST00000349748 PLBD2Q8NHP8 589 aa11.31□□□□□ -0.6
CAPN3-203ENST00000349748 TPCN2Q8NHX9 752 aa11.31□□□□□ -0.6
CAPN3-203ENST00000349748 CLEC11AQ9Y240 323 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms