RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 MUTP22033 750 aa11.01□□□□□ -0.65
CHRNA1-202ENST00000348749 RPA1P27694 616 aa11.01□□□□□ -0.65
CHRNA1-202ENST00000348749 CALCOCO2Q13137 446 aa11.01□□□□□ -0.65
CHRNA1-202ENST00000348749 LSAMPQ13449 338 aa11.01□□□□□ -0.65
CHRNA1-202ENST00000348749 RCN1Q15293 331 aa11.01□□□□□ -0.65
CHRNA1-202ENST00000348749 SLC15A2Q16348 729 aa11.01□□□□□ -0.65
CHRNA1-202ENST00000348749 SLC45A4Q5BKX6 768 aa11.01□□□□□ -0.65
CHRNA1-202ENST00000348749 ARSHQ5FYA8 562 aa11.01□□□□□ -0.65
CHRNA1-202ENST00000348749 ZNF772Q68DY9 489 aaPredicted RBP11.01□□□□□ -0.65
CHRNA1-202ENST00000348749 CCNJLQ8IV13 435 aa11.01□□□□□ -0.65
CHRNA1-202ENST00000348749 C12orf50Q8NA57 414 aaPredicted RBP11.01□□□□□ -0.65
CHRNA1-202ENST00000348749 LZICQ8WZA0 190 aa11.01□□□□□ -0.65
CHRNA1-202ENST00000348749 SLCO2A1Q92959 643 aa11.01□□□□□ -0.65
CHRNA1-202ENST00000348749 PPP1R12CQ9BZL4 782 aa11.01□□□□□ -0.65
CHRNA1-202ENST00000348749 IL1RAPL1Q9NZN1 696 aa11.01□□□□□ -0.65
CHRNA1-202ENST00000348749 ZNF212Q9UDV6 495 aa11.01□□□□□ -0.65
CHRNA1-202ENST00000348749 PCDHGA4Q9Y5G9 962 aa11.01□□□□□ -0.65
CHRNA1-202ENST00000348749 SPATA31A5Q5VU36 1347 aa11□□□□□ -0.65
CHRNA1-202ENST00000348749 FRMPD2Q68DX3 1309 aaPredicted RBP11□□□□□ -0.65
CHRNA1-202ENST00000348749 SPATA31A7Q8IWB4 1347 aa11□□□□□ -0.65
CHRNA1-202ENST00000348749 POTEB3A0JP26 581 aa11□□□□□ -0.65
CHRNA1-202ENST00000348749 POTECB2RU33 542 aa11□□□□□ -0.65
CHRNA1-202ENST00000348749 EIF3DO15371 548 aaKnown RBP eCLIP11□□□□□ -0.65
CHRNA1-202ENST00000348749 EDF1O60869 148 aaKnown RBP11□□□□□ -0.65
CHRNA1-202ENST00000348749 CDH16O75309 829 aa11□□□□□ -0.65
CHRNA1-202ENST00000348749 SLC18A1P54219 525 aa11□□□□□ -0.65
CHRNA1-202ENST00000348749 WDR4P57081 412 aaKnown RBP11□□□□□ -0.65
CHRNA1-202ENST00000348749 CDR2Q01850 454 aa11□□□□□ -0.65
CHRNA1-202ENST00000348749 MCL1Q07820 350 aa11□□□□□ -0.65
CHRNA1-202ENST00000348749 Q4G0T1 1027 aa11□□□□□ -0.65
CHRNA1-202ENST00000348749 SEL1L2Q5TEA6 688 aa11□□□□□ -0.65
CHRNA1-202ENST00000348749 ZNF449Q6P9G9 518 aa11□□□□□ -0.65
CHRNA1-202ENST00000348749 POTEBQ6S5H4 581 aa11□□□□□ -0.65
CHRNA1-202ENST00000348749 FAM47EQ6ZV65 393 aa11□□□□□ -0.65
CHRNA1-202ENST00000348749 MIGA2Q7L4E1 593 aa11□□□□□ -0.65
CHRNA1-202ENST00000348749 CCDC25Q86WR0 208 aa11□□□□□ -0.65
CHRNA1-202ENST00000348749 RHOT2Q8IXI1 618 aa11□□□□□ -0.65
CHRNA1-202ENST00000348749 ZDHHC14Q8IZN3 488 aa11□□□□□ -0.65
CHRNA1-202ENST00000348749 ANKRD35Q8N283 1001 aa11□□□□□ -0.65
CHRNA1-202ENST00000348749 RIBC1Q8N443 379 aaPredicted RBP11□□□□□ -0.65
CHRNA1-202ENST00000348749 ZNF398Q8TD17 642 aa11□□□□□ -0.65
CHRNA1-202ENST00000348749 FAM20AQ96MK3 541 aa11□□□□□ -0.65
CHRNA1-202ENST00000348749 OCEL1Q9H607 264 aa11□□□□□ -0.65
CHRNA1-202ENST00000348749 CD209Q9NNX6 404 aa11□□□□□ -0.65
CHRNA1-202ENST00000348749 OLFML3Q9NRN5 406 aa11□□□□□ -0.65
CHRNA1-202ENST00000348749 TMOD4Q9NZQ9 345 aa11□□□□□ -0.65
CHRNA1-202ENST00000348749 STX18Q9P2W9 335 aaKnown RBP11□□□□□ -0.65
CHRNA1-202ENST00000348749 TBC1D30Q9Y2I9 924 aa11□□□□□ -0.65
CHRNA1-202ENST00000348749 ANKRD62A6NC57 917 aa10.99□□□□□ -0.65
CHRNA1-202ENST00000348749 FAM47DPA6NHR8 397 aa10.99□□□□□ -0.65
CHRNA1-202ENST00000348749 TP73O15350 636 aa10.99□□□□□ -0.65
CHRNA1-202ENST00000348749 MAP3K7O43318 606 aa10.99□□□□□ -0.65
CHRNA1-202ENST00000348749 PSMG1O95456 288 aa10.99□□□□□ -0.65
CHRNA1-202ENST00000348749 CBX6O95503 412 aa10.99□□□□□ -0.65
CHRNA1-202ENST00000348749 ASMTLO95671 621 aa10.99□□□□□ -0.65
CHRNA1-202ENST00000348749 NR3C1P04150 777 aa10.99□□□□□ -0.65
CHRNA1-202ENST00000348749 SOX5P35711 763 aa10.99□□□□□ -0.65
CHRNA1-202ENST00000348749 SESN3P58005 492 aa10.99□□□□□ -0.65
CHRNA1-202ENST00000348749 SFSWAPQ12872 951 aaKnown RBP10.99□□□□□ -0.65
CHRNA1-202ENST00000348749 GRIK5Q16478 980 aa10.99□□□□□ -0.65
CHRNA1-202ENST00000348749 UBE2SQ16763 222 aa10.99□□□□□ -0.65
CHRNA1-202ENST00000348749 AADACL2Q6P093 401 aa10.99□□□□□ -0.65
CHRNA1-202ENST00000348749 CCDC105Q8IYK2 499 aa10.99□□□□□ -0.65
CHRNA1-202ENST00000348749 CYP4X1Q8N118 509 aa10.99□□□□□ -0.65
CHRNA1-202ENST00000348749 MORC4Q8TE76 937 aa10.99□□□□□ -0.65
CHRNA1-202ENST00000348749 SLC35C1Q96A29 364 aa10.99□□□□□ -0.65
CHRNA1-202ENST00000348749 ARHGEF26Q96DR7 871 aa10.99□□□□□ -0.65
CHRNA1-202ENST00000348749 ZNF184Q99676 751 aaPredicted RBP10.99□□□□□ -0.65
CHRNA1-202ENST00000348749 MIPEPQ99797 713 aa10.99□□□□□ -0.65
CHRNA1-202ENST00000348749 ZSWIM1Q9BR11 485 aa10.99□□□□□ -0.65
CHRNA1-202ENST00000348749 STK33Q9BYT3 514 aa10.99□□□□□ -0.65
CHRNA1-202ENST00000348749 SYNCQ9H7C4 482 aa10.99□□□□□ -0.65
CHRNA1-202ENST00000348749 UBN1Q9NPG3 1134 aa10.99□□□□□ -0.65
CHRNA1-202ENST00000348749 EURLQ9NYK6 297 aa10.99□□□□□ -0.65
CHRNA1-202ENST00000348749 TBC1D7Q9P0N9 293 aa10.99□□□□□ -0.65
CHRNA1-202ENST00000348749 MTUS1Q9ULD2 1270 aa10.99□□□□□ -0.65
CHRNA1-202ENST00000348749 G3BP2Q9UN86 482 aaKnown RBP10.99□□□□□ -0.65
CHRNA1-202ENST00000348749 JAG2Q9Y219 1238 aa10.99□□□□□ -0.65
CHRNA1-202ENST00000348749 ALG6Q9Y672 507 aa10.99□□□□□ -0.65
CHRNA1-202ENST00000348749 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.99□□□□□ -0.65
CHRNA1-202ENST00000348749 QSER1Q2KHR3 1735 aa10.99□□□□□ -0.65
CHRNA1-202ENST00000348749 C2CD2LO14523 706 aa10.99□□□□□ -0.65
CHRNA1-202ENST00000348749 CAPN9O14815 690 aa10.99□□□□□ -0.65
CHRNA1-202ENST00000348749 CCDC22O60826 627 aa10.99□□□□□ -0.65
CHRNA1-202ENST00000348749 PPP1R11O60927 126 aaPredicted RBP10.99□□□□□ -0.65
CHRNA1-202ENST00000348749 ZWINTO95229 277 aa10.99□□□□□ -0.65
CHRNA1-202ENST00000348749 ECEL1O95672 775 aa10.99□□□□□ -0.65
CHRNA1-202ENST00000348749 FOSP01100 380 aaPredicted RBP10.99□□□□□ -0.65
CHRNA1-202ENST00000348749 LYNP07948 512 aa10.99□□□□□ -0.65
CHRNA1-202ENST00000348749 ITIH2P19823 946 aa10.99□□□□□ -0.65
CHRNA1-202ENST00000348749 CTTNQ14247 550 aaKnown RBP10.99□□□□□ -0.65
CHRNA1-202ENST00000348749 SIX1Q15475 284 aaPredicted RBP10.99□□□□□ -0.65
CHRNA1-202ENST00000348749 CTC1Q2NKJ3 1217 aa10.99□□□□□ -0.65
CHRNA1-202ENST00000348749 ACSBG2Q5FVE4 666 aa10.99□□□□□ -0.65
CHRNA1-202ENST00000348749 RASIP1Q5U651 963 aa10.99□□□□□ -0.65
CHRNA1-202ENST00000348749 DAB2IPQ5VWQ8 1189 aa10.99□□□□□ -0.65
CHRNA1-202ENST00000348749 RFWD3Q6PCD5 774 aa10.99□□□□□ -0.65
CHRNA1-202ENST00000348749 GLYCTKQ8IVS8 523 aa10.99□□□□□ -0.65
CHRNA1-202ENST00000348749 SRRM1Q8IYB3 904 aaKnown RBP10.99□□□□□ -0.65
CHRNA1-202ENST00000348749 SMC1BQ8NDV3 1235 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms