RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 FAM129AQ9BZQ8 928 aa15.66■□□□□ 0.1
NUP50-201ENST00000347635 Q9H521 79 aa15.66■□□□□ 0.1
NUP50-201ENST00000347635 STOML1Q9UBI4 398 aa15.66■□□□□ 0.1
NUP50-201ENST00000347635 HAUS5O94927 633 aa15.65■□□□□ 0.1
NUP50-201ENST00000347635 CETPP11597 493 aa15.65■□□□□ 0.1
NUP50-201ENST00000347635 PSMA2P25787 234 aa15.65■□□□□ 0.1
NUP50-201ENST00000347635 ERVK-9P63128 1117 aa15.65■□□□□ 0.1
NUP50-201ENST00000347635 HP1BP3Q5SSJ5 553 aaPredicted RBP15.65■□□□□ 0.1
NUP50-201ENST00000347635 MFSD14CQ5VZR4 134 aa15.65■□□□□ 0.1
NUP50-201ENST00000347635 ATG16L1Q676U5 607 aa15.65■□□□□ 0.1
NUP50-201ENST00000347635 EEPD1Q7L9B9 569 aa15.65■□□□□ 0.1
NUP50-201ENST00000347635 RAB3IL1Q8TBN0 382 aa15.65■□□□□ 0.1
NUP50-201ENST00000347635 TTC17Q96AE7 1141 aa15.65■□□□□ 0.1
NUP50-201ENST00000347635 ZSWIM1Q9BR11 485 aa15.65■□□□□ 0.1
NUP50-201ENST00000347635 TIPINQ9BVW5 301 aa15.65■□□□□ 0.1
NUP50-201ENST00000347635 FGFR1OP2Q9NVK5 253 aa15.65■□□□□ 0.1
NUP50-201ENST00000347635 DDX20Q9UHI6 824 aaKnown RBP15.65■□□□□ 0.1
NUP50-201ENST00000347635 NOL3O60936 208 aaKnown RBP15.65■□□□□ 0.1
NUP50-201ENST00000347635 CAND2O75155 1236 aa15.65■□□□□ 0.1
NUP50-201ENST00000347635 CALB1P05937 261 aa15.65■□□□□ 0.1
NUP50-201ENST00000347635 PSMC5P62195 406 aa15.65■□□□□ 0.1
NUP50-201ENST00000347635 CDR2Q01850 454 aa15.65■□□□□ 0.1
NUP50-201ENST00000347635 PDIA2Q13087 525 aaKnown RBP15.65■□□□□ 0.1
NUP50-201ENST00000347635 SLC30A5Q8TAD4 765 aa15.65■□□□□ 0.1
NUP50-201ENST00000347635 RNF34Q969K3 372 aa15.65■□□□□ 0.1
NUP50-201ENST00000347635 C18orf8Q96DM3 657 aa15.65■□□□□ 0.1
NUP50-201ENST00000347635 FAM167BQ9BTA0 163 aa15.65■□□□□ 0.1
NUP50-201ENST00000347635 NOD2Q9HC29 1040 aa15.65■□□□□ 0.1
NUP50-201ENST00000347635 SUFUQ9UMX1 484 aa15.65■□□□□ 0.1
NUP50-201ENST00000347635 TRIM50Q86XT4 487 aa15.65■□□□□ 0.1
NUP50-201ENST00000347635 CHST13Q8NET6 341 aa15.65■□□□□ 0.1
NUP50-201ENST00000347635 KDM4CQ9H3R0 1056 aa15.65■□□□□ 0.1
NUP50-201ENST00000347635 SLC24A3Q9HC58 644 aa15.65■□□□□ 0.1
NUP50-201ENST00000347635 ATMINO43313 823 aaPredicted RBP15.65■□□□□ 0.1
NUP50-201ENST00000347635 TM4SF1P30408 202 aa15.65■□□□□ 0.1
NUP50-201ENST00000347635 GNA15P30679 374 aa15.65■□□□□ 0.1
NUP50-201ENST00000347635 GARSP41250 739 aaKnown RBP15.65■□□□□ 0.1
NUP50-201ENST00000347635 RAD23BP54727 409 aa15.65■□□□□ 0.1
NUP50-201ENST00000347635 TFAMQ00059 246 aaKnown RBP15.65■□□□□ 0.1
NUP50-201ENST00000347635 FUT2Q10981 343 aa15.65■□□□□ 0.1
NUP50-201ENST00000347635 SMC1BQ8NDV3 1235 aa15.65■□□□□ 0.1
NUP50-201ENST00000347635 NID2Q14112 1375 aa15.64■□□□□ 0.09
NUP50-201ENST00000347635 F8VZ95 297 aa15.64■□□□□ 0.09
NUP50-201ENST00000347635 CCND1P24385 295 aa15.64■□□□□ 0.09
NUP50-201ENST00000347635 ZNF844Q08AG5 666 aa15.64■□□□□ 0.09
NUP50-201ENST00000347635 SPOUT1Q5T280 376 aaKnown RBP15.64■□□□□ 0.09
NUP50-201ENST00000347635 TTC13Q8NBP0 860 aa15.64■□□□□ 0.09
NUP50-201ENST00000347635 MAP3K20Q9NYL2 800 aaKnown RBP15.64■□□□□ 0.09
NUP50-201ENST00000347635 PRR12Q9ULL5 1215 aa15.64■□□□□ 0.09
NUP50-201ENST00000347635 PHLPP1O60346 1717 aa15.64■□□□□ 0.09
NUP50-201ENST00000347635 K7ERI5 159 aa15.64■□□□□ 0.09
NUP50-201ENST00000347635 CYTH3O43739 400 aa15.64■□□□□ 0.09
NUP50-201ENST00000347635 TRIM72Q6ZMU5 477 aa15.64■□□□□ 0.09
NUP50-201ENST00000347635 ZBTB33Q86T24 672 aa15.64■□□□□ 0.09
NUP50-201ENST00000347635 GPD1LQ8N335 351 aa15.64■□□□□ 0.09
NUP50-201ENST00000347635 EPS8L3Q8TE67 593 aaKnown RBP15.64■□□□□ 0.09
NUP50-201ENST00000347635 NUDCD1Q96RS6 583 aa15.64■□□□□ 0.09
NUP50-201ENST00000347635 TSC22D3Q99576 134 aa15.64■□□□□ 0.09
NUP50-201ENST00000347635 DDX23Q9BUQ8 820 aaKnown RBP15.64■□□□□ 0.09
NUP50-201ENST00000347635 SENP1Q9P0U3 644 aa15.64■□□□□ 0.09
NUP50-201ENST00000347635 DCTN4Q9UJW0 460 aa15.64■□□□□ 0.09
NUP50-201ENST00000347635 MAFGO15525 162 aa15.64■□□□□ 0.09
NUP50-201ENST00000347635 VEGFAP15692 232 aaPredicted RBP15.64■□□□□ 0.09
NUP50-201ENST00000347635 CASP4P49662 377 aa15.64■□□□□ 0.09
NUP50-201ENST00000347635 FKBP1CQ5VVH2 108 aa15.64■□□□□ 0.09
NUP50-201ENST00000347635 MOXD1Q6UVY6 613 aa15.64■□□□□ 0.09
NUP50-201ENST00000347635 NLRP7Q8WX94 980 aa15.64■□□□□ 0.09
NUP50-201ENST00000347635 SPDL1Q96EA4 605 aa15.64■□□□□ 0.09
NUP50-201ENST00000347635 TRABDQ9H4I3 376 aa15.64■□□□□ 0.09
NUP50-201ENST00000347635 RGPD1P0DJD0 1748 aa15.64■□□□□ 0.09
NUP50-201ENST00000347635 A6NJR5 290 aa15.64■□□□□ 0.09
NUP50-201ENST00000347635 RSPH10B2B2RC85 870 aa15.64■□□□□ 0.09
NUP50-201ENST00000347635 P4HA2O15460 535 aa15.64■□□□□ 0.09
NUP50-201ENST00000347635 DIAPH2O60879 1101 aa15.64■□□□□ 0.09
NUP50-201ENST00000347635 RSPH10BP0C881 870 aa15.64■□□□□ 0.09
NUP50-201ENST00000347635 ZNF302Q9NR11 478 aa15.64■□□□□ 0.09
NUP50-201ENST00000347635 PCDHGC5Q9Y5F6 944 aa15.64■□□□□ 0.09
NUP50-201ENST00000347635 CAP2P40123 477 aa15.63■□□□□ 0.09
NUP50-201ENST00000347635 PDE1BQ01064 536 aa15.63■□□□□ 0.09
NUP50-201ENST00000347635 ANKRD20A8PQ5CZ79 823 aa15.63■□□□□ 0.09
NUP50-201ENST00000347635 CAPRIN2Q6IMN6 1127 aaKnown RBP15.63■□□□□ 0.09
NUP50-201ENST00000347635 TMEM39BQ9GZU3 492 aa15.63■□□□□ 0.09
NUP50-201ENST00000347635 C2orf40Q9H1Z8 148 aa15.63■□□□□ 0.09
NUP50-201ENST00000347635 OSGEPQ9NPF4 335 aa15.63■□□□□ 0.09
NUP50-201ENST00000347635 BATF3Q9NR55 127 aa15.63■□□□□ 0.09
NUP50-201ENST00000347635 FAM53CQ9NYF3 392 aa15.63■□□□□ 0.09
NUP50-201ENST00000347635 TOPAZ1Q8N9V7 1692 aa15.63■□□□□ 0.09
NUP50-201ENST00000347635 PABPN1LA6NDY0 278 aaKnown RBP15.63■□□□□ 0.09
NUP50-201ENST00000347635 COPEO14579 308 aa15.63■□□□□ 0.09
NUP50-201ENST00000347635 EPHB6O15197 1021 aa15.63■□□□□ 0.09
NUP50-201ENST00000347635 MSH4O15457 936 aa15.63■□□□□ 0.09
NUP50-201ENST00000347635 KCNJ1P48048 391 aa15.63■□□□□ 0.09
NUP50-201ENST00000347635 FNTAP49354 379 aa15.63■□□□□ 0.09
NUP50-201ENST00000347635 SCARA5Q6ZMJ2 495 aa15.63■□□□□ 0.09
NUP50-201ENST00000347635 TXNRD3Q86VQ6 643 aa15.63■□□□□ 0.09
NUP50-201ENST00000347635 CD302Q8IX05 232 aa15.63■□□□□ 0.09
NUP50-201ENST00000347635 TMEM35BQ8NCS4 154 aa15.63■□□□□ 0.09
NUP50-201ENST00000347635 SERPINB12Q96P63 405 aa15.63■□□□□ 0.09
NUP50-201ENST00000347635 AGPAT3Q9NRZ7 376 aa15.63■□□□□ 0.09
NUP50-201ENST00000347635 NXF1Q9UBU9 619 aaKnown RBP15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms