RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 ASTN1O14525 1302 aa16.34■□□□□ 0.21
LMNA-201ENST00000347559 TRPM3Q9HCF6 1732 aaPredicted RBP16.34■□□□□ 0.21
LMNA-201ENST00000347559 ECE2O60344 883 aa16.33■□□□□ 0.21
LMNA-201ENST00000347559 CCNFP41002 786 aa16.33■□□□□ 0.21
LMNA-201ENST00000347559 GPC5P78333 572 aa16.33■□□□□ 0.21
LMNA-201ENST00000347559 SIX1Q15475 284 aaPredicted RBP16.33■□□□□ 0.21
LMNA-201ENST00000347559 TUBGCP5Q96RT8 1024 aa16.33■□□□□ 0.21
LMNA-201ENST00000347559 ZNF184Q99676 751 aaPredicted RBP16.33■□□□□ 0.21
LMNA-201ENST00000347559 RHBDL2Q9NX52 303 aa16.33■□□□□ 0.21
LMNA-201ENST00000347559 A0A1B0GUL6 1792 aa16.33■□□□□ 0.2
LMNA-201ENST00000347559 CCDC22O60826 627 aa16.33■□□□□ 0.2
LMNA-201ENST00000347559 FMO5P49326 533 aa16.33■□□□□ 0.2
LMNA-201ENST00000347559 RTP1P59025 263 aa16.33■□□□□ 0.2
LMNA-201ENST00000347559 CYP4A11Q02928 519 aa16.33■□□□□ 0.2
LMNA-201ENST00000347559 SLC1A5Q15758 541 aa16.33■□□□□ 0.2
LMNA-201ENST00000347559 PKN2Q16513 984 aaKnown RBP16.33■□□□□ 0.2
LMNA-201ENST00000347559 CEP95Q96GE4 821 aa16.33■□□□□ 0.2
LMNA-201ENST00000347559 CYTH2Q99418 400 aa16.33■□□□□ 0.2
LMNA-201ENST00000347559 INTS2Q9H0H0 1204 aaKnown RBP16.33■□□□□ 0.2
LMNA-201ENST00000347559 ZWILCHQ9H900 591 aa16.33■□□□□ 0.2
LMNA-201ENST00000347559 ALG13Q9NP73 1137 aaKnown RBP16.33■□□□□ 0.2
LMNA-201ENST00000347559 DNAAF2Q9NVR5 837 aaKnown RBP16.33■□□□□ 0.2
LMNA-201ENST00000347559 ATP8B3O60423 1300 aa16.32■□□□□ 0.2
LMNA-201ENST00000347559 MROH7Q68CQ1 1323 aa16.32■□□□□ 0.2
LMNA-201ENST00000347559 CETN2P41208 172 aa16.32■□□□□ 0.2
LMNA-201ENST00000347559 PPP2R5CQ13362 524 aa16.32■□□□□ 0.2
LMNA-201ENST00000347559 CFAP157Q5JU67 520 aa16.32■□□□□ 0.2
LMNA-201ENST00000347559 FYB2Q5VWT5 728 aa16.32■□□□□ 0.2
LMNA-201ENST00000347559 C11orf63Q6NUN7 778 aa16.32■□□□□ 0.2
LMNA-201ENST00000347559 BTBD10Q9BSF8 475 aa16.32■□□□□ 0.2
LMNA-201ENST00000347559 FAM192AQ9GZU8 254 aa16.32■□□□□ 0.2
LMNA-201ENST00000347559 C1orf167Q5SNV9 1468 aa16.32■□□□□ 0.2
LMNA-201ENST00000347559 GSC2O15499 205 aa16.32■□□□□ 0.2
LMNA-201ENST00000347559 BAG2O95816 211 aa16.32■□□□□ 0.2
LMNA-201ENST00000347559 SPATA31D3P0C874 917 aa16.32■□□□□ 0.2
LMNA-201ENST00000347559 CPA2P48052 419 aa16.32■□□□□ 0.2
LMNA-201ENST00000347559 SLC12A3P55017 1021 aa16.32■□□□□ 0.2
LMNA-201ENST00000347559 DEUP1Q05D60 604 aa16.32■□□□□ 0.2
LMNA-201ENST00000347559 AP1B1Q10567 949 aa16.32■□□□□ 0.2
LMNA-201ENST00000347559 COG2Q14746 738 aa16.32■□□□□ 0.2
LMNA-201ENST00000347559 CYP1B1Q16678 543 aa16.32■□□□□ 0.2
LMNA-201ENST00000347559 WDR72Q3MJ13 1102 aa16.32■□□□□ 0.2
LMNA-201ENST00000347559 RHBDF2Q6PJF5 856 aa16.32■□□□□ 0.2
LMNA-201ENST00000347559 SPATA31D4Q6ZUB0 917 aa16.32■□□□□ 0.2
LMNA-201ENST00000347559 LRRC47Q8N1G4 583 aaKnown RBP16.32■□□□□ 0.2
LMNA-201ENST00000347559 SPATA16Q9BXB7 569 aa16.32■□□□□ 0.2
LMNA-201ENST00000347559 GPR88Q9GZN0 384 aa16.32■□□□□ 0.2
LMNA-201ENST00000347559 WNT8AQ9H1J5 351 aa16.32■□□□□ 0.2
LMNA-201ENST00000347559 SYNCQ9H7C4 482 aa16.32■□□□□ 0.2
LMNA-201ENST00000347559 TMEM165Q9HC07 324 aa16.32■□□□□ 0.2
LMNA-201ENST00000347559 ACP6Q9NPH0 428 aa16.32■□□□□ 0.2
LMNA-201ENST00000347559 KRT82Q9NSB4 513 aa16.32■□□□□ 0.2
LMNA-201ENST00000347559 MINPP1Q9UNW1 487 aa16.32■□□□□ 0.2
LMNA-201ENST00000347559 BCL9O00512 1426 aa16.32■□□□□ 0.2
LMNA-201ENST00000347559 HAUS5O94927 633 aa16.32■□□□□ 0.2
LMNA-201ENST00000347559 HIBADHP31937 336 aaKnown RBP16.32■□□□□ 0.2
LMNA-201ENST00000347559 EVA1CP58658 441 aa16.32■□□□□ 0.2
LMNA-201ENST00000347559 PLEKHG4Q58EX7 1191 aa16.32■□□□□ 0.2
LMNA-201ENST00000347559 IZUMO2Q6UXV1 221 aa16.32■□□□□ 0.2
LMNA-201ENST00000347559 C3orf67Q6ZVT6 689 aa16.32■□□□□ 0.2
LMNA-201ENST00000347559 RFWD2Q8NHY2 731 aa16.32■□□□□ 0.2
LMNA-201ENST00000347559 SH3TC2Q8TF17 1288 aa16.32■□□□□ 0.2
LMNA-201ENST00000347559 SMC6Q96SB8 1091 aa16.32■□□□□ 0.2
LMNA-201ENST00000347559 SYT11Q9BT88 431 aa16.32■□□□□ 0.2
LMNA-201ENST00000347559 MXD3Q9BW11 206 aa16.32■□□□□ 0.2
LMNA-201ENST00000347559 HEY2Q9UBP5 337 aa16.32■□□□□ 0.2
LMNA-201ENST00000347559 LGALS13Q9UHV8 139 aa16.32■□□□□ 0.2
LMNA-201ENST00000347559 ESYT2A0FGR8 921 aa16.31■□□□□ 0.2
LMNA-201ENST00000347559 TRAFD1O14545 582 aaPredicted RBP16.31■□□□□ 0.2
LMNA-201ENST00000347559 TBCAO75347 108 aaKnown RBP16.31■□□□□ 0.2
LMNA-201ENST00000347559 PIK3CAP42336 1068 aa16.31■□□□□ 0.2
LMNA-201ENST00000347559 MYBPC3Q14896 1274 aa16.31■□□□□ 0.2
LMNA-201ENST00000347559 ZNF513Q8N8E2 541 aaPredicted RBP16.31■□□□□ 0.2
LMNA-201ENST00000347559 PRR11Q96HE9 360 aaPredicted RBP16.31■□□□□ 0.2
LMNA-201ENST00000347559 HEMGNQ9BXL5 484 aa16.31■□□□□ 0.2
LMNA-201ENST00000347559 UBE2TQ9NPD8 197 aaPredicted RBP16.31■□□□□ 0.2
LMNA-201ENST00000347559 PICK1Q9NRD5 415 aa16.31■□□□□ 0.2
LMNA-201ENST00000347559 SLAIN2Q9P270 581 aa16.31■□□□□ 0.2
LMNA-201ENST00000347559 ATXN10Q9UBB4 475 aa16.31■□□□□ 0.2
LMNA-201ENST00000347559 APEX2Q9UBZ4 518 aa16.31■□□□□ 0.2
LMNA-201ENST00000347559 GAS8O95995 478 aa16.31■□□□□ 0.2
LMNA-201ENST00000347559 FGFR1P11362 822 aa16.31■□□□□ 0.2
LMNA-201ENST00000347559 TPP2P29144 1249 aaPredicted RBP16.31■□□□□ 0.2
LMNA-201ENST00000347559 PSMC2P35998 433 aaKnown RBP16.31■□□□□ 0.2
LMNA-201ENST00000347559 SEPT7Q16181 437 aaKnown RBP16.31■□□□□ 0.2
LMNA-201ENST00000347559 PDK4Q16654 411 aa16.31■□□□□ 0.2
LMNA-201ENST00000347559 SLC45A4Q5BKX6 768 aa16.31■□□□□ 0.2
LMNA-201ENST00000347559 TRABD2AQ86V40 505 aa16.31■□□□□ 0.2
LMNA-201ENST00000347559 TTC1Q99614 292 aa16.31■□□□□ 0.2
LMNA-201ENST00000347559 NUP85Q9BW27 656 aa16.31■□□□□ 0.2
LMNA-201ENST00000347559 DNM3Q9UQ16 869 aa16.31■□□□□ 0.2
LMNA-201ENST00000347559 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.31■□□□□ 0.2
LMNA-201ENST00000347559 RREB1Q92766 1687 aa16.3■□□□□ 0.2
LMNA-201ENST00000347559 LRP5O75197 1615 aa16.3■□□□□ 0.2
LMNA-201ENST00000347559 PFDN1O60925 122 aa16.3■□□□□ 0.2
LMNA-201ENST00000347559 AMPD1P23109 780 aa16.3■□□□□ 0.2
LMNA-201ENST00000347559 RRM1P23921 792 aa16.3■□□□□ 0.2
LMNA-201ENST00000347559 PSMC4P43686 418 aa16.3■□□□□ 0.2
LMNA-201ENST00000347559 STAT4Q14765 748 aa16.3■□□□□ 0.2
LMNA-201ENST00000347559 PHLDB3Q6NSJ2 640 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms