RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 DAB2P98082 770 aa18.43■□□□□ 0.54
SPAST-202ENST00000345662 MAPK7Q13164 816 aa18.43■□□□□ 0.54
SPAST-202ENST00000345662 ARL13BQ3SXY8 428 aa18.43■□□□□ 0.54
SPAST-202ENST00000345662 SUSD4Q5VX71 490 aa18.43■□□□□ 0.54
SPAST-202ENST00000345662 AGR3Q8TD06 166 aa18.43■□□□□ 0.54
SPAST-202ENST00000345662 LACRTQ9GZZ8 138 aa18.43■□□□□ 0.54
SPAST-202ENST00000345662 KCND1Q9NSA2 647 aa18.43■□□□□ 0.54
SPAST-202ENST00000345662 ADCY10Q96PN6 1610 aa18.43■□□□□ 0.54
SPAST-202ENST00000345662 SNAP23O00161 211 aa18.43■□□□□ 0.54
SPAST-202ENST00000345662 SKAP2O75563 359 aaPredicted RBP18.43■□□□□ 0.54
SPAST-202ENST00000345662 ABL1P00519 1130 aa18.43■□□□□ 0.54
SPAST-202ENST00000345662 CD44P16070 742 aaKnown RBP18.43■□□□□ 0.54
SPAST-202ENST00000345662 COMTP21964 271 aa18.43■□□□□ 0.54
SPAST-202ENST00000345662 PRDX5P30044 214 aa18.43■□□□□ 0.54
SPAST-202ENST00000345662 HABP4Q5JVS0 413 aaKnown RBP18.43■□□□□ 0.54
SPAST-202ENST00000345662 ACBD5Q5T8D3 534 aaPredicted RBP18.43■□□□□ 0.54
SPAST-202ENST00000345662 MAGEB18Q96M61 343 aa18.43■□□□□ 0.54
SPAST-202ENST00000345662 HPS5Q9UPZ3 1129 aa18.43■□□□□ 0.54
SPAST-202ENST00000345662 PXDNLA1KZ92 1463 aa18.43■□□□□ 0.54
SPAST-202ENST00000345662 COILP38432 576 aaPredicted RBP18.43■□□□□ 0.54
SPAST-202ENST00000345662 FMO5P49326 533 aa18.43■□□□□ 0.54
SPAST-202ENST00000345662 INPP5AQ14642 412 aa18.43■□□□□ 0.54
SPAST-202ENST00000345662 TPCN2Q8NHX9 752 aa18.43■□□□□ 0.54
SPAST-202ENST00000345662 CHCHD3Q9NX63 227 aaKnown RBP18.43■□□□□ 0.54
SPAST-202ENST00000345662 BFARQ9NZS9 450 aa18.43■□□□□ 0.54
SPAST-202ENST00000345662 IQGAP3Q86VI3 1631 aa18.43■□□□□ 0.54
SPAST-202ENST00000345662 CAND2O75155 1236 aa18.42■□□□□ 0.54
SPAST-202ENST00000345662 KCNJ1P48048 391 aa18.42■□□□□ 0.54
SPAST-202ENST00000345662 SNAP25P60880 206 aa18.42■□□□□ 0.54
SPAST-202ENST00000345662 BTKQ06187 659 aa18.42■□□□□ 0.54
SPAST-202ENST00000345662 FLOT2Q14254 428 aa18.42■□□□□ 0.54
SPAST-202ENST00000345662 CEP95Q96GE4 821 aa18.42■□□□□ 0.54
SPAST-202ENST00000345662 H0Y626 953 aa18.42■□□□□ 0.54
SPAST-202ENST00000345662 TRIM16O95361 564 aa18.42■□□□□ 0.54
SPAST-202ENST00000345662 ZNF200P98182 395 aaPredicted RBP18.42■□□□□ 0.54
SPAST-202ENST00000345662 BTNL9Q6UXG8 535 aa18.42■□□□□ 0.54
SPAST-202ENST00000345662 ARHGAP27Q6ZUM4 889 aa18.42■□□□□ 0.54
SPAST-202ENST00000345662 PRPF39Q86UA1 669 aaKnown RBP18.42■□□□□ 0.54
SPAST-202ENST00000345662 FAM160B2Q86V87 743 aa18.42■□□□□ 0.54
SPAST-202ENST00000345662 EPS8L3Q8TE67 593 aaKnown RBP18.42■□□□□ 0.54
SPAST-202ENST00000345662 EIF3EP60228 445 aaKnown RBP18.42■□□□□ 0.54
SPAST-202ENST00000345662 FIGNQ5HY92 759 aa18.42■□□□□ 0.54
SPAST-202ENST00000345662 GALNT4Q8N4A0 578 aa18.42■□□□□ 0.54
SPAST-202ENST00000345662 DENND3A2RUS2 1198 aa18.42■□□□□ 0.54
SPAST-202ENST00000345662 USP17L10C9JJH3 530 aa18.42■□□□□ 0.54
SPAST-202ENST00000345662 CPA2P48052 419 aa18.42■□□□□ 0.54
SPAST-202ENST00000345662 SLC44A5Q8NCS7 719 aa18.42■□□□□ 0.54
SPAST-202ENST00000345662 PIK3R5Q8WYR1 880 aa18.42■□□□□ 0.54
SPAST-202ENST00000345662 PAGR1Q9BTK6 254 aa18.42■□□□□ 0.54
SPAST-202ENST00000345662 EYA4O95677 639 aa18.41■□□□□ 0.54
SPAST-202ENST00000345662 KRT8P05787 483 aa18.41■□□□□ 0.54
SPAST-202ENST00000345662 ENO3P13929 434 aaPredicted RBP18.41■□□□□ 0.54
SPAST-202ENST00000345662 SDC4P31431 198 aa18.41■□□□□ 0.54
SPAST-202ENST00000345662 POU5F1BQ06416 359 aa18.41■□□□□ 0.54
SPAST-202ENST00000345662 PTK7Q13308 1070 aa18.41■□□□□ 0.54
SPAST-202ENST00000345662 NLRP9Q7RTR0 991 aa18.41■□□□□ 0.54
SPAST-202ENST00000345662 TTC8Q8TAM2 541 aa18.41■□□□□ 0.54
SPAST-202ENST00000345662 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.41■□□□□ 0.54
SPAST-202ENST00000345662 DACH2Q96NX9 599 aa18.41■□□□□ 0.54
SPAST-202ENST00000345662 C15orf41Q9Y2V0 281 aa18.41■□□□□ 0.54
SPAST-202ENST00000345662 ARHGEF40Q8TER5 1519 aa18.41■□□□□ 0.54
SPAST-202ENST00000345662 PDE5AO76074 875 aa18.41■□□□□ 0.54
SPAST-202ENST00000345662 ZCCHC18P0CG32 403 aa18.41■□□□□ 0.54
SPAST-202ENST00000345662 PRKG1Q13976 671 aa18.41■□□□□ 0.54
SPAST-202ENST00000345662 TBCCQ15814 346 aa18.41■□□□□ 0.54
SPAST-202ENST00000345662 ZNF699Q32M78 642 aa18.41■□□□□ 0.54
SPAST-202ENST00000345662 PDXDC2PQ6P474 469 aa18.41■□□□□ 0.54
SPAST-202ENST00000345662 ABCC3O15438 1527 aa18.41■□□□□ 0.54
SPAST-202ENST00000345662 NRKQ7Z2Y5 1582 aa18.41■□□□□ 0.54
SPAST-202ENST00000345662 CRB1P82279 1406 aa18.41■□□□□ 0.54
SPAST-202ENST00000345662 ATP6V1B1P15313 513 aa18.41■□□□□ 0.54
SPAST-202ENST00000345662 FNTAP49354 379 aa18.41■□□□□ 0.54
SPAST-202ENST00000345662 AKT3Q9Y243 479 aa18.41■□□□□ 0.54
SPAST-202ENST00000345662 IQSEC2Q5JU85 1478 aa18.41■□□□□ 0.54
SPAST-202ENST00000345662 NPHP3-ACAD11A0A0J9YXS1 232 aa18.41■□□□□ 0.54
SPAST-202ENST00000345662 EIF2AK1Q9BQI3 630 aaKnown RBP18.41■□□□□ 0.54
SPAST-202ENST00000345662 PREX2Q70Z35 1606 aa18.41■□□□□ 0.54
SPAST-202ENST00000345662 C16orf96A6NNT2 1141 aa18.4■□□□□ 0.54
SPAST-202ENST00000345662 EIF2AK2P19525 551 aaKnown RBP18.4■□□□□ 0.54
SPAST-202ENST00000345662 CATSPER3Q86XQ3 398 aa18.4■□□□□ 0.54
SPAST-202ENST00000345662 NIM1KQ8IY84 436 aa18.4■□□□□ 0.54
SPAST-202ENST00000345662 HSPA13P48723 471 aa18.4■□□□□ 0.54
SPAST-202ENST00000345662 SERPINB9P50453 376 aa18.4■□□□□ 0.54
SPAST-202ENST00000345662 KLHDC7AQ5VTJ3 777 aa18.4■□□□□ 0.54
SPAST-202ENST00000345662 CDKAL1Q5VV42 579 aa18.4■□□□□ 0.54
SPAST-202ENST00000345662 ARMCX2Q7L311 632 aa18.4■□□□□ 0.54
SPAST-202ENST00000345662 DDI1Q8WTU0 396 aa18.4■□□□□ 0.54
SPAST-202ENST00000345662 ADNPQ9H2P0 1102 aa18.4■□□□□ 0.54
SPAST-202ENST00000345662 AKAP10O43572 662 aa18.4■□□□□ 0.54
SPAST-202ENST00000345662 NMT1P30419 496 aaKnown RBP18.4■□□□□ 0.54
SPAST-202ENST00000345662 HLFQ16534 295 aa18.4■□□□□ 0.54
SPAST-202ENST00000345662 DCAF15Q66K64 600 aa18.4■□□□□ 0.54
SPAST-202ENST00000345662 XPO1O14980 1071 aaKnown RBP18.4■□□□□ 0.54
SPAST-202ENST00000345662 SPAG6O75602 509 aa18.4■□□□□ 0.54
SPAST-202ENST00000345662 SYF2O95926 243 aaKnown RBP18.4■□□□□ 0.54
SPAST-202ENST00000345662 GLI1P08151 1106 aa18.4■□□□□ 0.54
SPAST-202ENST00000345662 CCDC159P0C7I6 412 aa18.4■□□□□ 0.54
SPAST-202ENST00000345662 CENPCQ03188 943 aa18.4■□□□□ 0.54
SPAST-202ENST00000345662 KCNMA1Q12791 1236 aa18.4■□□□□ 0.54
SPAST-202ENST00000345662 SLC30A5Q8TAD4 765 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms