RNA–Protein interactions for RNA: ENST00000344586.8

NKX2-3-201, Transcript of NK2 homeobox 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NKX2-3, Length 2,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3-201ENST00000344586 TKFCQ3LXA3 575 aa24.72■■□□□ 1.55
NKX2-3-201ENST00000344586 FAM133BQ5BKY9 247 aaKnown RBP24.72■■□□□ 1.55
NKX2-3-201ENST00000344586 NIPA1Q7RTP0 329 aa24.72■■□□□ 1.55
NKX2-3-201ENST00000344586 CEP57Q86XR8 500 aa24.72■■□□□ 1.55
NKX2-3-201ENST00000344586 PARD3BQ8TEW8 1205 aa24.72■■□□□ 1.55
NKX2-3-201ENST00000344586 ARHGEF2Q92974 986 aaKnown RBP24.72■■□□□ 1.55
NKX2-3-201ENST00000344586 ELMO3Q96BJ8 720 aa24.72■■□□□ 1.55
NKX2-3-201ENST00000344586 CXorf56Q9H5V9 222 aa24.72■■□□□ 1.55
NKX2-3-201ENST00000344586 TMEM8AQ9HCN3 771 aa24.72■■□□□ 1.55
NKX2-3-201ENST00000344586 TOPORSQ9NS56 1045 aaPredicted RBP24.72■■□□□ 1.55
NKX2-3-201ENST00000344586 ASIC3Q9UHC3 531 aa24.72■■□□□ 1.55
NKX2-3-201ENST00000344586 ASTN2O75129 1339 aaPredicted RBP24.72■■□□□ 1.55
NKX2-3-201ENST00000344586 TMEM120BA0PK00 339 aa24.71■■□□□ 1.55
NKX2-3-201ENST00000344586 IVDP26440 423 aa24.71■■□□□ 1.55
NKX2-3-201ENST00000344586 PTK6Q13882 451 aa24.71■■□□□ 1.55
NKX2-3-201ENST00000344586 CLEC16AQ2KHT3 1053 aa24.71■■□□□ 1.55
NKX2-3-201ENST00000344586 RPAINQ86UA6 219 aa24.71■■□□□ 1.55
NKX2-3-201ENST00000344586 CCDC63Q8NA47 563 aa24.71■■□□□ 1.55
NKX2-3-201ENST00000344586 MGARPQ8TDB4 240 aa24.71■■□□□ 1.55
NKX2-3-201ENST00000344586 TAS1R2Q8TE23 839 aa24.71■■□□□ 1.55
NKX2-3-201ENST00000344586 ATG4AQ8WYN0 398 aa24.71■■□□□ 1.55
NKX2-3-201ENST00000344586 SNF8Q96H20 258 aa24.71■■□□□ 1.55
NKX2-3-201ENST00000344586 NT5C1BQ96P26 610 aa24.71■■□□□ 1.55
NKX2-3-201ENST00000344586 IWS1Q96ST2 819 aa24.71■■□□□ 1.55
NKX2-3-201ENST00000344586 HERPUD2Q9BSE4 406 aa24.71■■□□□ 1.55
NKX2-3-201ENST00000344586 FEM1BQ9UK73 627 aa24.71■■□□□ 1.55
NKX2-3-201ENST00000344586 AGAP1Q9UPQ3 857 aa24.71■■□□□ 1.55
NKX2-3-201ENST00000344586 CD2APQ9Y5K6 639 aa24.71■■□□□ 1.55
NKX2-3-201ENST00000344586 TULP1O00294 542 aaPredicted RBP24.71■■□□□ 1.55
NKX2-3-201ENST00000344586 ITIH2P19823 946 aa24.71■■□□□ 1.55
NKX2-3-201ENST00000344586 PLVAPQ9BX97 442 aa24.71■■□□□ 1.55
NKX2-3-201ENST00000344586 CTNNAL1Q9UBT7 734 aa24.71■■□□□ 1.55
NKX2-3-201ENST00000344586 ANAPC7Q9UJX3 599 aa24.71■■□□□ 1.55
NKX2-3-201ENST00000344586 CCPG1Q9ULG6 757 aa24.71■■□□□ 1.55
NKX2-3-201ENST00000344586 UBIAD1Q9Y5Z9 338 aa24.71■■□□□ 1.55
NKX2-3-201ENST00000344586 ZNF536O15090 1300 aa24.7■■□□□ 1.55
NKX2-3-201ENST00000344586 CLRN2A0PK11 232 aa24.7■■□□□ 1.54
NKX2-3-201ENST00000344586 NFIBO00712 420 aa24.7■■□□□ 1.54
NKX2-3-201ENST00000344586 CALCAP01258 141 aa24.7■■□□□ 1.54
NKX2-3-201ENST00000344586 DYDC1Q8WWB3 177 aa24.7■■□□□ 1.54
NKX2-3-201ENST00000344586 TIPINQ9BVW5 301 aa24.7■■□□□ 1.54
NKX2-3-201ENST00000344586 GLIS2Q9BZE0 524 aaPredicted RBP24.7■■□□□ 1.54
NKX2-3-201ENST00000344586 TRIM7Q9C029 511 aa24.7■■□□□ 1.54
NKX2-3-201ENST00000344586 TBX20Q9UMR3 447 aa24.7■■□□□ 1.54
NKX2-3-201ENST00000344586 LOC102724159A0A0B4J2E5 919 aa24.7■■□□□ 1.54
NKX2-3-201ENST00000344586 MAPK4P31152 587 aa24.7■■□□□ 1.54
NKX2-3-201ENST00000344586 PWP2Q15269 919 aaKnown RBP24.7■■□□□ 1.54
NKX2-3-201ENST00000344586 KIFAP3Q92845 792 aa24.7■■□□□ 1.54
NKX2-3-201ENST00000344586 KIFC3Q9BVG8 833 aa24.7■■□□□ 1.54
NKX2-3-201ENST00000344586 FGFR1OP2Q9NVK5 253 aa24.7■■□□□ 1.54
NKX2-3-201ENST00000344586 USP15Q9Y4E8 981 aaPredicted RBP24.7■■□□□ 1.54
NKX2-3-201ENST00000344586 TCP11X1B4DZS4 312 aa24.69■■□□□ 1.54
NKX2-3-201ENST00000344586 TTC4O95801 387 aa24.69■■□□□ 1.54
NKX2-3-201ENST00000344586 ICAM1P05362 532 aa24.69■■□□□ 1.54
NKX2-3-201ENST00000344586 SLC8A1P32418 973 aa24.69■■□□□ 1.54
NKX2-3-201ENST00000344586 ITGA8P53708 1063 aa24.69■■□□□ 1.54
NKX2-3-201ENST00000344586 MRPS9P82933 396 aaKnown RBP24.69■■□□□ 1.54
NKX2-3-201ENST00000344586 SYDE1Q6ZW31 735 aaPredicted RBP24.69■■□□□ 1.54
NKX2-3-201ENST00000344586 TMEM161BQ8NDZ6 487 aa24.69■■□□□ 1.54
NKX2-3-201ENST00000344586 FBXL13Q8NEE6 735 aa24.69■■□□□ 1.54
NKX2-3-201ENST00000344586 CLEC4DQ8WXI8 215 aa24.69■■□□□ 1.54
NKX2-3-201ENST00000344586 NOD2Q9HC29 1040 aa24.69■■□□□ 1.54
NKX2-3-201ENST00000344586 RAB20Q9NX57 234 aa24.69■■□□□ 1.54
NKX2-3-201ENST00000344586 TMOD2Q9NZR1 351 aa24.69■■□□□ 1.54
NKX2-3-201ENST00000344586 MROH7Q68CQ1 1323 aa24.69■■□□□ 1.54
NKX2-3-201ENST00000344586 CFAP73A6NFT4 308 aa24.68■■□□□ 1.54
NKX2-3-201ENST00000344586 FOXO6A8MYZ6 492 aa24.68■■□□□ 1.54
NKX2-3-201ENST00000344586 UBOX5O94941 541 aa24.68■■□□□ 1.54
NKX2-3-201ENST00000344586 PTGER2P43116 358 aa24.68■■□□□ 1.54
NKX2-3-201ENST00000344586 FAM102BQ5T8I3 360 aa24.68■■□□□ 1.54
NKX2-3-201ENST00000344586 PLA2G4FQ68DD2 849 aa24.68■■□□□ 1.54
NKX2-3-201ENST00000344586 MAP4K3Q8IVH8 894 aa24.68■■□□□ 1.54
NKX2-3-201ENST00000344586 DNAJC17Q9NVM6 304 aaKnown RBP24.68■■□□□ 1.54
NKX2-3-201ENST00000344586 EXOC7Q9UPT5 735 aa24.68■■□□□ 1.54
NKX2-3-201ENST00000344586 CNTNAP1P78357 1384 aa24.68■■□□□ 1.54
NKX2-3-201ENST00000344586 YDJCA8MPS7 323 aa24.68■■□□□ 1.54
NKX2-3-201ENST00000344586 ATP5DP30049 168 aa24.68■■□□□ 1.54
NKX2-3-201ENST00000344586 MAN1A1P33908 653 aa24.68■■□□□ 1.54
NKX2-3-201ENST00000344586 MTMR1Q13613 665 aa24.68■■□□□ 1.54
NKX2-3-201ENST00000344586 E2F5Q15329 346 aa24.68■■□□□ 1.54
NKX2-3-201ENST00000344586 TRIP13Q15645 432 aaPredicted RBP24.68■■□□□ 1.54
NKX2-3-201ENST00000344586 DCLK3Q9C098 648 aa24.68■■□□□ 1.54
NKX2-3-201ENST00000344586 SPDYE2BA6NHP3 402 aa24.67■■□□□ 1.54
NKX2-3-201ENST00000344586 C21orf2O43822 256 aa24.67■■□□□ 1.54
NKX2-3-201ENST00000344586 SPDYE6P0CI01 402 aa24.67■■□□□ 1.54
NKX2-3-201ENST00000344586 CAP2P40123 477 aa24.67■■□□□ 1.54
NKX2-3-201ENST00000344586 MEX3CQ5U5Q3 659 aaKnown RBP24.67■■□□□ 1.54
NKX2-3-201ENST00000344586 PCNX4Q63HM2 1172 aa24.67■■□□□ 1.54
NKX2-3-201ENST00000344586 CDAN1Q8IWY9 1227 aa24.67■■□□□ 1.54
NKX2-3-201ENST00000344586 C4orf19Q8IY42 314 aa24.67■■□□□ 1.54
NKX2-3-201ENST00000344586 TMC2Q8TDI7 906 aa24.67■■□□□ 1.54
NKX2-3-201ENST00000344586 UNGP13051 313 aaPredicted RBP24.66■■□□□ 1.54
NKX2-3-201ENST00000344586 KRT5P13647 590 aa24.66■■□□□ 1.54
NKX2-3-201ENST00000344586 CNGA1P29973 690 aa24.66■■□□□ 1.54
NKX2-3-201ENST00000344586 NCALDP61601 193 aa24.66■■□□□ 1.54
NKX2-3-201ENST00000344586 KYNUQ16719 465 aa24.66■■□□□ 1.54
NKX2-3-201ENST00000344586 GALNTL6Q49A17 601 aa24.66■■□□□ 1.54
NKX2-3-201ENST00000344586 SLC39A4Q6P5W5 647 aa24.66■■□□□ 1.54
NKX2-3-201ENST00000344586 TRMT1LQ7Z2T5 733 aaKnown RBP24.66■■□□□ 1.54
NKX2-3-201ENST00000344586 TBC1D1Q86TI0 1168 aaPredicted RBP24.66■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms