RNA–Protein interactions for RNA: ENST00000344391.9

CEACAM1-202, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,619 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-202ENST00000344391 ST3GAL5Q9UNP4 418 aa17.7■□□□□ 0.42
CEACAM1-202ENST00000344391 PTPRJQ12913 1337 aa17.7■□□□□ 0.42
CEACAM1-202ENST00000344391 C4BPAP04003 597 aaKnown RBP17.69■□□□□ 0.42
CEACAM1-202ENST00000344391 CXCL8P10145 99 aa17.69■□□□□ 0.42
CEACAM1-202ENST00000344391 CKBP12277 381 aa17.69■□□□□ 0.42
CEACAM1-202ENST00000344391 GRM5P41594 1212 aa17.69■□□□□ 0.42
CEACAM1-202ENST00000344391 ZBED6P86452 979 aa17.69■□□□□ 0.42
CEACAM1-202ENST00000344391 CCZ1BP86790 482 aa17.69■□□□□ 0.42
CEACAM1-202ENST00000344391 CCZ1P86791 482 aaPredicted RBP17.69■□□□□ 0.42
CEACAM1-202ENST00000344391 UBXN11Q5T124 520 aa17.69■□□□□ 0.42
CEACAM1-202ENST00000344391 LMBRD2Q68DH5 695 aaPredicted RBP17.69■□□□□ 0.42
CEACAM1-202ENST00000344391 TRAF7Q6Q0C0 670 aa17.69■□□□□ 0.42
CEACAM1-202ENST00000344391 EIF2AQ9BY44 585 aaKnown RBP17.69■□□□□ 0.42
CEACAM1-202ENST00000344391 OSBPL7Q9BZF2 842 aa17.69■□□□□ 0.42
CEACAM1-202ENST00000344391 INTS2Q9H0H0 1204 aaKnown RBP17.69■□□□□ 0.42
CEACAM1-202ENST00000344391 CEP72Q9P209 647 aa17.69■□□□□ 0.42
CEACAM1-202ENST00000344391 SQORQ9Y6N5 450 aa17.69■□□□□ 0.42
CEACAM1-202ENST00000344391 MROH7Q68CQ1 1323 aa17.69■□□□□ 0.42
CEACAM1-202ENST00000344391 TRIP11Q15643 1979 aa17.69■□□□□ 0.42
CEACAM1-202ENST00000344391 RBAK-RBAKDNI3L0D1 243 aa17.69■□□□□ 0.42
CEACAM1-202ENST00000344391 MEFVO15553 781 aaPredicted RBP17.69■□□□□ 0.42
CEACAM1-202ENST00000344391 IL18RAPO95256 599 aa17.69■□□□□ 0.42
CEACAM1-202ENST00000344391 CD4P01730 458 aa17.69■□□□□ 0.42
CEACAM1-202ENST00000344391 GJA8P48165 433 aa17.69■□□□□ 0.42
CEACAM1-202ENST00000344391 AP3M2P53677 418 aa17.69■□□□□ 0.42
CEACAM1-202ENST00000344391 ZACNQ401N2 412 aa17.69■□□□□ 0.42
CEACAM1-202ENST00000344391 WDR49Q8IV35 697 aa17.69■□□□□ 0.42
CEACAM1-202ENST00000344391 BAP1Q92560 729 aa17.69■□□□□ 0.42
CEACAM1-202ENST00000344391 FAM84AQ96KN4 292 aa17.69■□□□□ 0.42
CEACAM1-202ENST00000344391 DNAJC7Q99615 494 aa17.69■□□□□ 0.42
CEACAM1-202ENST00000344391 AGO3Q9H9G7 860 aaKnown RBP17.69■□□□□ 0.42
CEACAM1-202ENST00000344391 ABHD10Q9NUJ1 306 aa17.69■□□□□ 0.42
CEACAM1-202ENST00000344391 FBXL5Q9UKA1 691 aa17.69■□□□□ 0.42
CEACAM1-202ENST00000344391 KIAA0100Q14667 2235 aaKnown RBP17.68■□□□□ 0.42
CEACAM1-202ENST00000344391 GPR182O15218 404 aa17.68■□□□□ 0.42
CEACAM1-202ENST00000344391 COL6A1P12109 1028 aa17.68■□□□□ 0.42
CEACAM1-202ENST00000344391 UCHL3P15374 230 aa17.68■□□□□ 0.42
CEACAM1-202ENST00000344391 POLR2FP61218 127 aaKnown RBP17.68■□□□□ 0.42
CEACAM1-202ENST00000344391 NFX1Q12986 1120 aaKnown RBP17.68■□□□□ 0.42
CEACAM1-202ENST00000344391 LPIN1Q14693 890 aa17.68■□□□□ 0.42
CEACAM1-202ENST00000344391 SLC10A6Q3KNW5 377 aa17.68■□□□□ 0.42
CEACAM1-202ENST00000344391 CACNA2D4Q7Z3S7 1137 aa17.68■□□□□ 0.42
CEACAM1-202ENST00000344391 TMEM139Q8IV31 216 aa17.68■□□□□ 0.42
CEACAM1-202ENST00000344391 FBXL13Q8NEE6 735 aa17.68■□□□□ 0.42
CEACAM1-202ENST00000344391 CCDC112Q8NEF3 446 aa17.68■□□□□ 0.42
CEACAM1-202ENST00000344391 ZNF397Q8NF99 534 aaPredicted RBP17.68■□□□□ 0.42
CEACAM1-202ENST00000344391 OR5B17Q8NGF7 314 aa17.68■□□□□ 0.42
CEACAM1-202ENST00000344391 OR8K1Q8NGG5 319 aa17.68■□□□□ 0.42
CEACAM1-202ENST00000344391 CAGE1Q8TC20 777 aa17.68■□□□□ 0.42
CEACAM1-202ENST00000344391 TAS1R2Q8TE23 839 aa17.68■□□□□ 0.42
CEACAM1-202ENST00000344391 FAM212AQ96EL1 285 aa17.68■□□□□ 0.42
CEACAM1-202ENST00000344391 ACAP3Q96P50 834 aa17.68■□□□□ 0.42
CEACAM1-202ENST00000344391 CCDC94Q9BW85 323 aaPredicted RBP17.68■□□□□ 0.42
CEACAM1-202ENST00000344391 ASB7Q9H672 318 aa17.68■□□□□ 0.42
CEACAM1-202ENST00000344391 ERVK-5Q9HDB9 667 aa17.68■□□□□ 0.42
CEACAM1-202ENST00000344391 CHST12Q9NRB3 414 aa17.68■□□□□ 0.42
CEACAM1-202ENST00000344391 PADI3Q9ULW8 664 aa17.68■□□□□ 0.42
CEACAM1-202ENST00000344391 ZKSCAN5Q9Y2L8 839 aa17.68■□□□□ 0.42
CEACAM1-202ENST00000344391 RALGAPA2Q2PPJ7 1873 aa17.68■□□□□ 0.42
CEACAM1-202ENST00000344391 LACTBL1A8MY62 500 aa17.67■□□□□ 0.42
CEACAM1-202ENST00000344391 LRRN2O75325 713 aa17.67■□□□□ 0.42
CEACAM1-202ENST00000344391 GHRP10912 638 aa17.67■□□□□ 0.42
CEACAM1-202ENST00000344391 FECHP22830 423 aa17.67■□□□□ 0.42
CEACAM1-202ENST00000344391 CD52P31358 61 aa17.67■□□□□ 0.42
CEACAM1-202ENST00000344391 TDRD10Q5VZ19 366 aaKnown RBP17.67■□□□□ 0.42
CEACAM1-202ENST00000344391 SLC39A5Q6ZMH5 540 aa17.67■□□□□ 0.42
CEACAM1-202ENST00000344391 ANKLE1Q8NAG6 615 aa17.67■□□□□ 0.42
CEACAM1-202ENST00000344391 USP38Q8NB14 1042 aa17.67■□□□□ 0.42
CEACAM1-202ENST00000344391 SEMA4DQ92854 862 aa17.67■□□□□ 0.42
CEACAM1-202ENST00000344391 NAA15Q9BXJ9 866 aaKnown RBP17.67■□□□□ 0.42
CEACAM1-202ENST00000344391 TRIM6Q9C030 488 aaPredicted RBP17.67■□□□□ 0.42
CEACAM1-202ENST00000344391 NLRC4Q9NPP4 1024 aa17.67■□□□□ 0.42
CEACAM1-202ENST00000344391 RAB20Q9NX57 234 aa17.67■□□□□ 0.42
CEACAM1-202ENST00000344391 SNTG2Q9NY99 539 aa17.67■□□□□ 0.42
CEACAM1-202ENST00000344391 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.67■□□□□ 0.42
CEACAM1-202ENST00000344391 SKILP12757 684 aa17.66■□□□□ 0.42
CEACAM1-202ENST00000344391 EFCAB13Q8IY85 973 aa17.66■□□□□ 0.42
CEACAM1-202ENST00000344391 BAG1Q99933 345 aaPredicted RBP17.66■□□□□ 0.42
CEACAM1-202ENST00000344391 APEX2Q9UBZ4 518 aa17.66■□□□□ 0.42
CEACAM1-202ENST00000344391 DAAM1Q9Y4D1 1078 aa17.66■□□□□ 0.42
CEACAM1-202ENST00000344391 FHOD1Q9Y613 1164 aa17.66■□□□□ 0.42
CEACAM1-202ENST00000344391 VNN1O95497 513 aa17.65■□□□□ 0.42
CEACAM1-202ENST00000344391 ATN1P54259 1190 aaPredicted RBP17.65■□□□□ 0.42
CEACAM1-202ENST00000344391 PAK2Q13177 524 aa17.65■□□□□ 0.42
CEACAM1-202ENST00000344391 MBTPS1Q14703 1052 aa17.65■□□□□ 0.42
CEACAM1-202ENST00000344391 DUOXA2Q1HG44 320 aa17.65■□□□□ 0.42
CEACAM1-202ENST00000344391 C1orf53Q5VUE5 145 aa17.65■□□□□ 0.42
CEACAM1-202ENST00000344391 TWF2Q6IBS0 349 aaKnown RBP17.65■□□□□ 0.42
CEACAM1-202ENST00000344391 IQCEQ6IPM2 695 aa17.65■□□□□ 0.42
CEACAM1-202ENST00000344391 PHLDB3Q6NSJ2 640 aa17.65■□□□□ 0.42
CEACAM1-202ENST00000344391 PDXDC1Q6P996 788 aa17.65■□□□□ 0.42
CEACAM1-202ENST00000344391 GJB7Q6PEY0 223 aa17.65■□□□□ 0.42
CEACAM1-202ENST00000344391 RRAGAQ7L523 313 aa17.65■□□□□ 0.42
CEACAM1-202ENST00000344391 ANKRD33Q7Z3H0 272 aa17.65■□□□□ 0.42
CEACAM1-202ENST00000344391 CD302Q8IX05 232 aa17.65■□□□□ 0.42
CEACAM1-202ENST00000344391 DIS3LQ8TF46 1054 aaKnown RBP17.65■□□□□ 0.42
CEACAM1-202ENST00000344391 NXF3Q9H4D5 531 aaKnown RBP17.65■□□□□ 0.42
CEACAM1-202ENST00000344391 PLEKHA5Q9HAU0 1116 aa17.65■□□□□ 0.42
CEACAM1-202ENST00000344391 PLAGL2Q9UPG8 496 aa17.65■□□□□ 0.42
CEACAM1-202ENST00000344391 HES2Q9Y543 173 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms