RNA–Protein interactions for RNA: ENST00000344204.8

TRIO-202, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIO, Length 11,100 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-202ENST00000344204 RBM46Q8TBY0 533 aaKnown RBP14.36□□□□□ -0.11
TRIO-202ENST00000344204 TTMPQ5BVD1 217 aa14.35□□□□□ -0.11
TRIO-202ENST00000344204 MXD3Q9BW11 206 aa14.35□□□□□ -0.11
TRIO-202ENST00000344204 PICALMQ13492 652 aa14.35□□□□□ -0.11
TRIO-202ENST00000344204 SCYL2Q6P3W7 929 aa14.35□□□□□ -0.11
TRIO-202ENST00000344204 ARHGEF1Q92888 912 aaKnown RBP14.35□□□□□ -0.11
TRIO-202ENST00000344204 EHD4Q9H223 541 aa14.35□□□□□ -0.11
TRIO-202ENST00000344204 COG4Q9H9E3 785 aa14.35□□□□□ -0.11
TRIO-202ENST00000344204 CDY2AQ9Y6F7 541 aa14.35□□□□□ -0.11
TRIO-202ENST00000344204 CDY1Q9Y6F8 540 aa14.35□□□□□ -0.11
TRIO-202ENST00000344204 ZNF233A6NK53 670 aa14.35□□□□□ -0.11
TRIO-202ENST00000344204 NPR1P16066 1061 aa14.35□□□□□ -0.11
TRIO-202ENST00000344204 BLMHQ13867 455 aa14.35□□□□□ -0.11
TRIO-202ENST00000344204 ODR4Q5SWX8 454 aa14.35□□□□□ -0.11
TRIO-202ENST00000344204 EPS8L2Q9H6S3 715 aa14.35□□□□□ -0.11
TRIO-202ENST00000344204 SCN8AQ9UQD0 1980 aa14.35□□□□□ -0.11
TRIO-202ENST00000344204 PRLRP16471 622 aa14.35□□□□□ -0.11
TRIO-202ENST00000344204 CDH2P19022 906 aaPredicted RBP14.35□□□□□ -0.11
TRIO-202ENST00000344204 TMC4Q7Z404 712 aa14.35□□□□□ -0.11
TRIO-202ENST00000344204 ELOA2Q8IYF1 753 aaPredicted RBP14.35□□□□□ -0.11
TRIO-202ENST00000344204 NOL6Q9H6R4 1146 aaKnown RBP14.35□□□□□ -0.11
TRIO-202ENST00000344204 RRN3Q9NYV6 651 aa14.35□□□□□ -0.11
TRIO-202ENST00000344204 A0A1W2PQJ5 194 aa14.35□□□□□ -0.11
TRIO-202ENST00000344204 TMTC4Q5T4D3 741 aa14.35□□□□□ -0.11
TRIO-202ENST00000344204 ATP10AO60312 1499 aa14.35□□□□□ -0.11
TRIO-202ENST00000344204 LPIN1Q14693 890 aa14.35□□□□□ -0.11
TRIO-202ENST00000344204 LRRC6Q86X45 466 aa14.35□□□□□ -0.11
TRIO-202ENST00000344204 ATL2Q8NHH9 583 aa14.35□□□□□ -0.11
TRIO-202ENST00000344204 INPP5DQ92835 1189 aa14.35□□□□□ -0.11
TRIO-202ENST00000344204 COPRSQ9NQ92 184 aa14.35□□□□□ -0.11
TRIO-202ENST00000344204 SELENONQ9NZV5 590 aa14.35□□□□□ -0.11
TRIO-202ENST00000344204 ERICH1Q86X53 443 aa14.35□□□□□ -0.11
TRIO-202ENST00000344204 DCUN1D5Q9BTE7 237 aa14.35□□□□□ -0.11
TRIO-202ENST00000344204 PSTPIP2Q9H939 334 aa14.35□□□□□ -0.11
TRIO-202ENST00000344204 WDR64B1ANS9 1081 aa14.35□□□□□ -0.11
TRIO-202ENST00000344204 PFDN6O15212 129 aa14.35□□□□□ -0.11
TRIO-202ENST00000344204 PRPF3O43395 683 aaKnown RBP14.35□□□□□ -0.11
TRIO-202ENST00000344204 PSMA4P25789 261 aaKnown RBP14.35□□□□□ -0.11
TRIO-202ENST00000344204 NCAPG2Q86XI2 1143 aa14.35□□□□□ -0.11
TRIO-202ENST00000344204 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.35□□□□□ -0.11
TRIO-202ENST00000344204 TAGLN3Q9UI15 199 aa14.35□□□□□ -0.11
TRIO-202ENST00000344204 GRK2P25098 689 aa14.35□□□□□ -0.11
TRIO-202ENST00000344204 C6orf229H3BNL8 230 aa14.34□□□□□ -0.11
TRIO-202ENST00000344204 MXI1P50539 228 aa14.34□□□□□ -0.11
TRIO-202ENST00000344204 TUBA3CQ13748 450 aa14.34□□□□□ -0.11
TRIO-202ENST00000344204 PNMA1Q8ND90 353 aa14.34□□□□□ -0.11
TRIO-202ENST00000344204 BTBD10Q9BSF8 475 aa14.34□□□□□ -0.11
TRIO-202ENST00000344204 ASPSCR1Q9BZE9 553 aa14.34□□□□□ -0.11
TRIO-202ENST00000344204 APPL1Q9UKG1 709 aa14.34□□□□□ -0.11
TRIO-202ENST00000344204 ADAMTS12P58397 1594 aa14.34□□□□□ -0.11
TRIO-202ENST00000344204 CASP5P51878 434 aa14.34□□□□□ -0.11
TRIO-202ENST00000344204 DNAAF3Q8N9W5 541 aa14.34□□□□□ -0.11
TRIO-202ENST00000344204 DNAJC7Q99615 494 aa14.34□□□□□ -0.11
TRIO-202ENST00000344204 MYLK2Q9H1R3 596 aa14.34□□□□□ -0.11
TRIO-202ENST00000344204 STX7O15400 261 aaKnown RBP14.34□□□□□ -0.11
TRIO-202ENST00000344204 NR3C1P04150 777 aa14.34□□□□□ -0.11
TRIO-202ENST00000344204 NR1D2Q14995 579 aa14.34□□□□□ -0.11
TRIO-202ENST00000344204 EFHC1Q5JVL4 640 aa14.34□□□□□ -0.11
TRIO-202ENST00000344204 GALNT15Q8N3T1 639 aa14.34□□□□□ -0.11
TRIO-202ENST00000344204 TATDN2Q93075 761 aa14.34□□□□□ -0.11
TRIO-202ENST00000344204 ARSEP51690 589 aa14.34□□□□□ -0.11
TRIO-202ENST00000344204 CENPTQ96BT3 561 aa14.34□□□□□ -0.11
TRIO-202ENST00000344204 NSMCE4AQ9NXX6 385 aa14.34□□□□□ -0.11
TRIO-202ENST00000344204 OATP04181 439 aa14.34□□□□□ -0.11
TRIO-202ENST00000344204 ITIH2P19823 946 aa14.34□□□□□ -0.11
TRIO-202ENST00000344204 EYA1Q99502 592 aa14.34□□□□□ -0.11
TRIO-202ENST00000344204 EMILIN3Q9NT22 766 aa14.34□□□□□ -0.11
TRIO-202ENST00000344204 COPG2Q9UBF2 871 aa14.34□□□□□ -0.11
TRIO-202ENST00000344204 ENO3P13929 434 aaPredicted RBP14.34□□□□□ -0.11
TRIO-202ENST00000344204 TUBA1BP68363 451 aa14.34□□□□□ -0.11
TRIO-202ENST00000344204 YWHAHQ04917 246 aaPredicted RBP14.34□□□□□ -0.11
TRIO-202ENST00000344204 KCNH2Q12809 1159 aa14.34□□□□□ -0.11
TRIO-202ENST00000344204 TUBA1AQ71U36 451 aa14.34□□□□□ -0.11
TRIO-202ENST00000344204 GLMNQ92990 594 aa14.34□□□□□ -0.11
TRIO-202ENST00000344204 GCOM2Q9BZD3 368 aaPredicted RBP14.34□□□□□ -0.11
TRIO-202ENST00000344204 AGPAT5Q9NUQ2 364 aa14.34□□□□□ -0.11
TRIO-202ENST00000344204 WHRNQ9P202 907 aa14.34□□□□□ -0.11
TRIO-202ENST00000344204 ZC3H13Q5T200 1668 aaKnown RBP14.34□□□□□ -0.11
TRIO-202ENST00000344204 IDI1Q13907 227 aa14.34□□□□□ -0.11
TRIO-202ENST00000344204 IL12RB1P42701 662 aa14.34□□□□□ -0.11
TRIO-202ENST00000344204 LPIN2Q92539 896 aa14.34□□□□□ -0.11
TRIO-202ENST00000344204 RASSF9O75901 435 aa14.34□□□□□ -0.11
TRIO-202ENST00000344204 USP11P51784 963 aa14.34□□□□□ -0.11
TRIO-202ENST00000344204 MAPK11Q15759 364 aa14.34□□□□□ -0.11
TRIO-202ENST00000344204 ARMCX4Q5H9R4 360 aa14.34□□□□□ -0.11
TRIO-202ENST00000344204 SH3GLB2Q9NR46 395 aa14.34□□□□□ -0.11
TRIO-202ENST00000344204 RIPK1Q13546 671 aa14.33□□□□□ -0.11
TRIO-202ENST00000344204 AASDHQ4L235 1098 aaPredicted RBP14.33□□□□□ -0.11
TRIO-202ENST00000344204 TMEM237Q96Q45 408 aa14.33□□□□□ -0.11
TRIO-202ENST00000344204 MIS18BP1Q6P0N0 1132 aa14.33□□□□□ -0.12
TRIO-202ENST00000344204 PASD1Q8IV76 773 aa14.33□□□□□ -0.12
TRIO-202ENST00000344204 RBM12BQ8IXT5 1001 aaKnown RBP14.33□□□□□ -0.12
TRIO-202ENST00000344204 CCNYL1Q8N7R7 359 aa14.33□□□□□ -0.12
TRIO-202ENST00000344204 SH3BP1Q9Y3L3 701 aa14.33□□□□□ -0.12
TRIO-202ENST00000344204 IDH3BO43837 385 aa14.33□□□□□ -0.12
TRIO-202ENST00000344204 KRT19P08727 400 aa14.33□□□□□ -0.12
TRIO-202ENST00000344204 UBE3AQ05086 875 aa14.33□□□□□ -0.12
TRIO-202ENST00000344204 STK4Q13043 487 aa14.33□□□□□ -0.12
TRIO-202ENST00000344204 FAM47AQ5JRC9 791 aa14.33□□□□□ -0.12
TRIO-202ENST00000344204 APOL6Q9BWW8 343 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms