RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 BTN3A3O00478 584 aa3.96□□□□□ -1.77
SYNE2-202ENST00000344113 SLC1A1P43005 524 aa3.96□□□□□ -1.77
SYNE2-202ENST00000344113 CAMK1Q14012 370 aa3.96□□□□□ -1.77
SYNE2-202ENST00000344113 TRPM8Q7Z2W7 1104 aa3.96□□□□□ -1.77
SYNE2-202ENST00000344113 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.96□□□□□ -1.77
SYNE2-202ENST00000344113 LHFPL3Q86UP9 236 aa3.96□□□□□ -1.77
SYNE2-202ENST00000344113 HEATR4Q86WZ0 1026 aa3.96□□□□□ -1.77
SYNE2-202ENST00000344113 ABCB11O95342 1321 aa3.96□□□□□ -1.77
SYNE2-202ENST00000344113 POLR3DP05423 398 aaPredicted RBP3.96□□□□□ -1.78
SYNE2-202ENST00000344113 CLTBP09497 229 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 ATF6P18850 670 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 BDNFP23560 247 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 ATP1A4Q13733 1029 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 PAPD7Q5XG87 772 aaKnown RBP3.96□□□□□ -1.78
SYNE2-202ENST00000344113 BICRALQ6AI39 1079 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 TAS2R42Q7RTR8 314 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 SLC51BQ86UW2 128 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 NLRP14Q86W24 1093 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 PLCZ1Q86YW0 608 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 TAF1DQ9H5J8 278 aaPredicted RBP3.96□□□□□ -1.78
SYNE2-202ENST00000344113 CBX8Q9HC52 389 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 ZNF277Q9NRM2 450 aaPredicted RBP3.96□□□□□ -1.78
SYNE2-202ENST00000344113 TNFAIP8O95379 198 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 MED26O95402 600 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 GSTT1P30711 240 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 TTC30BQ8N4P2 665 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 FNDC8Q8TC99 324 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 CABLES1Q8TDN4 633 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 LMCD1Q9NZU5 365 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 EXTL2Q9UBQ6 330 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 PFKFB2O60825 505 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 B3GALNT1O75752 331 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 CYP19A1P11511 503 aaPredicted RBP3.96□□□□□ -1.78
SYNE2-202ENST00000344113 GSPT1P15170 499 aaKnown RBP3.96□□□□□ -1.78
SYNE2-202ENST00000344113 TCF12Q99081 682 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 MRPL1Q9BYD6 325 aaKnown RBP3.96□□□□□ -1.78
SYNE2-202ENST00000344113 ABCG8Q9H221 673 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 GDPD2Q9HCC8 539 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 PHF2O75151 1096 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 AGTP01019 485 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 ACVR2BQ13705 512 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 PLEKHA7Q6IQ23 1121 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 GPR141Q7Z602 305 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 KRT78Q8N1N4 520 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 PJA1Q8NG27 643 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 MAGEF1Q9HAY2 307 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 STRIP2Q9ULQ0 834 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 GRIN2AQ12879 1464 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 POGZQ7Z3K3 1410 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 MFN2O95140 757 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 ATP6V1G2O95670 118 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 CAP2P40123 477 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 RASA2Q15283 850 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 NUP50Q9UKX7 468 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 LIX1Q8N485 282 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 KBTBD3Q8NAB2 608 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 NHEJ1Q9H9Q4 299 aaPredicted RBP3.96□□□□□ -1.78
SYNE2-202ENST00000344113 FAIMQ9NVQ4 179 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 SGK1O00141 431 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 KYNUQ16719 465 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 C16orf89Q6UX73 402 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 FKBP9P1Q75LS8 142 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 IQCKQ8N0W5 287 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 SLC17A8Q8NDX2 589 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 STK32AQ8WU08 396 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 HPS3Q969F9 1004 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 M0R2C6 588 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 PSMD9O00233 223 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 PDPK1O15530 556 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 DFNA5O60443 496 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 CHRNA3P32297 505 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 PGDP52209 483 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 NR1H2P55055 460 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 SEMA3AQ14563 771 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 EPHA7Q15375 998 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 TNFAIP8L3Q5GJ75 292 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 SNAP47Q5SQN1 464 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 ERICH1Q86X53 443 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 KSR1Q8IVT5 923 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 CLYBLQ8N0X4 340 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 PBXIP1Q96AQ6 731 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 CALML4Q96GE6 196 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 BICC1Q9H694 974 aaKnown RBP3.96□□□□□ -1.78
SYNE2-202ENST00000344113 MINK1Q8N4C8 1332 aaPredicted RBP3.96□□□□□ -1.78
SYNE2-202ENST00000344113 LZTS3O60299 673 aaPredicted RBP3.96□□□□□ -1.78
SYNE2-202ENST00000344113 KATNA1O75449 491 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 CAPNS1P04632 268 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 ZNF829Q3KNS6 432 aaPredicted RBP3.96□□□□□ -1.78
SYNE2-202ENST00000344113 RNASEH2BQ5TBB1 312 aaKnown RBP3.96□□□□□ -1.78
SYNE2-202ENST00000344113 ARMCX5Q6P1M9 558 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 CNNM4Q6P4Q7 775 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 FBXL16Q8N461 479 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 SLC30A5Q8TAD4 765 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 NEDD4LQ96PU5 975 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 WRBO00258 174 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 MFAP3LO75121 409 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 NR5A1Q13285 461 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 TRADDQ15628 312 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 ZBED8Q8IZ13 594 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 PPWD1Q96BP3 646 aaKnown RBP3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms