RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 ZBTB42B2RXF5 422 aa8□□□□□ -1.13
ZNF540-202ENST00000343599 SHOX2O60902 331 aaPredicted RBP8□□□□□ -1.13
ZNF540-202ENST00000343599 FGF18O76093 207 aa8□□□□□ -1.13
ZNF540-202ENST00000343599 FSBPO95073 299 aa8□□□□□ -1.13
ZNF540-202ENST00000343599 ADRB1P08588 477 aa8□□□□□ -1.13
ZNF540-202ENST00000343599 ZNF883P0CG24 379 aa8□□□□□ -1.13
ZNF540-202ENST00000343599 DARSP14868 501 aaKnown RBP8□□□□□ -1.13
ZNF540-202ENST00000343599 IGFBP4P22692 258 aa8□□□□□ -1.13
ZNF540-202ENST00000343599 CCL23P55773 120 aa8□□□□□ -1.13
ZNF540-202ENST00000343599 HTR4Q13639 388 aa8□□□□□ -1.13
ZNF540-202ENST00000343599 BTG3Q14201 252 aaPredicted RBP8□□□□□ -1.13
ZNF540-202ENST00000343599 ARID5BQ14865 1188 aa8□□□□□ -1.13
ZNF540-202ENST00000343599 CAMKK1Q8N5S9 505 aa8□□□□□ -1.13
ZNF540-202ENST00000343599 MAB21L3Q8N8X9 362 aa8□□□□□ -1.13
ZNF540-202ENST00000343599 MAGEC3Q8TD91 643 aa8□□□□□ -1.13
ZNF540-202ENST00000343599 SNRNP27Q8WVK2 155 aaKnown RBP8□□□□□ -1.13
ZNF540-202ENST00000343599 PCYT2Q99447 389 aa8□□□□□ -1.13
ZNF540-202ENST00000343599 PARD6BQ9BYG5 372 aa8□□□□□ -1.13
ZNF540-202ENST00000343599 RNPEPQ9H4A4 650 aa8□□□□□ -1.13
ZNF540-202ENST00000343599 FBXW11Q9UKB1 542 aa8□□□□□ -1.13
ZNF540-202ENST00000343599 VWA8A3KMH1 1905 aa8□□□□□ -1.13
ZNF540-202ENST00000343599 LCHNA4D1U4 455 aa7.99□□□□□ -1.13
ZNF540-202ENST00000343599 GRXCR1A8MXD5 290 aa7.99□□□□□ -1.13
ZNF540-202ENST00000343599 CDKL5O76039 1030 aa7.99□□□□□ -1.13
ZNF540-202ENST00000343599 CYP2C9P11712 490 aa7.99□□□□□ -1.13
ZNF540-202ENST00000343599 THPOP40225 353 aa7.99□□□□□ -1.13
ZNF540-202ENST00000343599 GSDMDP57764 484 aa7.99□□□□□ -1.13
ZNF540-202ENST00000343599 ETF1P62495 437 aaKnown RBP7.99□□□□□ -1.13
ZNF540-202ENST00000343599 NFXL1Q6ZNB6 911 aa7.99□□□□□ -1.13
ZNF540-202ENST00000343599 TMTC3Q6ZXV5 915 aa7.99□□□□□ -1.13
ZNF540-202ENST00000343599 HDXQ7Z353 690 aa7.99□□□□□ -1.13
ZNF540-202ENST00000343599 ZNF276Q8N554 614 aa7.99□□□□□ -1.13
ZNF540-202ENST00000343599 PARD3BQ8TEW8 1205 aa7.99□□□□□ -1.13
ZNF540-202ENST00000343599 SCLYQ96I15 445 aa7.99□□□□□ -1.13
ZNF540-202ENST00000343599 CRACR2AQ9BSW2 395 aa7.99□□□□□ -1.13
ZNF540-202ENST00000343599 TM6SF1Q9BZW5 370 aa7.99□□□□□ -1.13
ZNF540-202ENST00000343599 AZI2Q9H6S1 392 aa7.99□□□□□ -1.13
ZNF540-202ENST00000343599 DBR1Q9UK59 544 aaKnown RBP7.99□□□□□ -1.13
ZNF540-202ENST00000343599 NYNRINQ9P2P1 1898 aaKnown RBP7.99□□□□□ -1.13
ZNF540-202ENST00000343599 PCDH15Q96QU1 1955 aa7.99□□□□□ -1.13
ZNF540-202ENST00000343599 IGLV3-22A0A075B6J6 115 aa7.99□□□□□ -1.13
ZNF540-202ENST00000343599 PTPDC1A2A3K4 754 aa7.99□□□□□ -1.13
ZNF540-202ENST00000343599 DHX15O43143 795 aaKnown RBP7.99□□□□□ -1.13
ZNF540-202ENST00000343599 PRPF3O43395 683 aaKnown RBP7.99□□□□□ -1.13
ZNF540-202ENST00000343599 PROS1P07225 676 aa7.99□□□□□ -1.13
ZNF540-202ENST00000343599 GCKP35557 465 aa7.99□□□□□ -1.13
ZNF540-202ENST00000343599 CCR3P51677 355 aa7.99□□□□□ -1.13
ZNF540-202ENST00000343599 FUT2Q10981 343 aa7.99□□□□□ -1.13
ZNF540-202ENST00000343599 VPS53Q5VIR6 699 aa7.99□□□□□ -1.13
ZNF540-202ENST00000343599 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.99□□□□□ -1.13
ZNF540-202ENST00000343599 RTN4RL1Q86UN2 441 aaPredicted RBP7.99□□□□□ -1.13
ZNF540-202ENST00000343599 C4orf19Q8IY42 314 aa7.99□□□□□ -1.13
ZNF540-202ENST00000343599 POF1BQ8WVV4 589 aa7.99□□□□□ -1.13
ZNF540-202ENST00000343599 RNF26Q9BY78 433 aaPredicted RBP7.99□□□□□ -1.13
ZNF540-202ENST00000343599 BOLA2Q9H3K6 86 aa7.99□□□□□ -1.13
ZNF540-202ENST00000343599 ACBD3Q9H3P7 528 aa7.99□□□□□ -1.13
ZNF540-202ENST00000343599 TLE6Q9H808 572 aa7.99□□□□□ -1.13
ZNF540-202ENST00000343599 CD248Q9HCU0 757 aa7.99□□□□□ -1.13
ZNF540-202ENST00000343599 OSGEPQ9NPF4 335 aa7.99□□□□□ -1.13
ZNF540-202ENST00000343599 BARHL2Q9NY43 387 aa7.99□□□□□ -1.13
ZNF540-202ENST00000343599 TFIP11Q9UBB9 837 aaKnown RBP7.99□□□□□ -1.13
ZNF540-202ENST00000343599 BLOC1S6Q9UL45 172 aa7.99□□□□□ -1.13
ZNF540-202ENST00000343599 NCANO14594 1321 aa7.99□□□□□ -1.13
ZNF540-202ENST00000343599 hCG_2014768A0A024R1R8 64 aa7.99□□□□□ -1.13
ZNF540-202ENST00000343599 SYN3O14994 580 aa7.99□□□□□ -1.13
ZNF540-202ENST00000343599 GRM6O15303 877 aa7.99□□□□□ -1.13
ZNF540-202ENST00000343599 DKK1O94907 266 aa7.99□□□□□ -1.13
ZNF540-202ENST00000343599 ADH1AP07327 375 aa7.99□□□□□ -1.13
ZNF540-202ENST00000343599 ZSCAN22P10073 491 aaPredicted RBP7.99□□□□□ -1.13
ZNF540-202ENST00000343599 VAC14Q08AM6 782 aa7.99□□□□□ -1.13
ZNF540-202ENST00000343599 ANO6Q4KMQ2 910 aa7.99□□□□□ -1.13
ZNF540-202ENST00000343599 IFIT1BQ5T764 474 aaKnown RBP7.99□□□□□ -1.13
ZNF540-202ENST00000343599 TTC22Q5TAA0 569 aa7.99□□□□□ -1.13
ZNF540-202ENST00000343599 CCDC149Q6ZUS6 474 aa7.99□□□□□ -1.13
ZNF540-202ENST00000343599 JAZF1Q86VZ6 243 aa7.99□□□□□ -1.13
ZNF540-202ENST00000343599 NT5DC4Q86YG4 428 aa7.99□□□□□ -1.13
ZNF540-202ENST00000343599 LEO1Q8WVC0 666 aaPredicted RBP7.99□□□□□ -1.13
ZNF540-202ENST00000343599 ANO2Q9NQ90 1003 aa7.99□□□□□ -1.13
ZNF540-202ENST00000343599 KCND2Q9NZV8 630 aa7.99□□□□□ -1.13
ZNF540-202ENST00000343599 EBF1Q9UH73 591 aa7.99□□□□□ -1.13
ZNF540-202ENST00000343599 KIAA0100Q14667 2235 aaKnown RBP7.99□□□□□ -1.13
ZNF540-202ENST00000343599 ERICH2A1L162 156 aa7.98□□□□□ -1.13
ZNF540-202ENST00000343599 KLRF2D3W0D1 207 aa7.98□□□□□ -1.13
ZNF540-202ENST00000343599 M0R2N6 131 aa7.98□□□□□ -1.13
ZNF540-202ENST00000343599 SH2B2O14492 632 aaPredicted RBP7.98□□□□□ -1.13
ZNF540-202ENST00000343599 ZNF197O14709 1029 aa7.98□□□□□ -1.13
ZNF540-202ENST00000343599 TM4SF5O14894 197 aa7.98□□□□□ -1.13
ZNF540-202ENST00000343599 RTN3O95197 1032 aaPredicted RBP7.98□□□□□ -1.13
ZNF540-202ENST00000343599 STBD1O95210 358 aa7.98□□□□□ -1.13
ZNF540-202ENST00000343599 SP9P0CG40 484 aa7.98□□□□□ -1.13
ZNF540-202ENST00000343599 GNA11P29992 359 aa7.98□□□□□ -1.13
ZNF540-202ENST00000343599 ZNF132P52740 706 aa7.98□□□□□ -1.13
ZNF540-202ENST00000343599 ZYXQ15942 572 aaKnown RBP7.98□□□□□ -1.13
ZNF540-202ENST00000343599 CEP55Q53EZ4 464 aa7.98□□□□□ -1.13
ZNF540-202ENST00000343599 XKR3Q5GH77 459 aa7.98□□□□□ -1.13
ZNF540-202ENST00000343599 BEND6Q5SZJ8 279 aaPredicted RBP7.98□□□□□ -1.13
ZNF540-202ENST00000343599 ZFYVE27Q5T4F4 411 aa7.98□□□□□ -1.13
ZNF540-202ENST00000343599 CD302Q8IX05 232 aa7.98□□□□□ -1.13
ZNF540-202ENST00000343599 C3orf20Q8ND61 904 aa7.98□□□□□ -1.13
ZNF540-202ENST00000343599 PJA1Q8NG27 643 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms