RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 ARHGEF1Q92888 912 aaKnown RBP8.66□□□□□ -1.02
ATG4A-201ENST00000343524 FAM81BQ96LP2 452 aa8.66□□□□□ -1.02
ATG4A-201ENST00000343524 ECSITQ9BQ95 431 aa8.66□□□□□ -1.02
ATG4A-201ENST00000343524 CORO1BQ9BR76 489 aa8.66□□□□□ -1.02
ATG4A-201ENST00000343524 OXCT2Q9BYC2 517 aaPredicted RBP8.66□□□□□ -1.02
ATG4A-201ENST00000343524 SEMA6BQ9H3T3 888 aa8.66□□□□□ -1.02
ATG4A-201ENST00000343524 NRDE2Q9H7Z3 1164 aa8.66□□□□□ -1.02
ATG4A-201ENST00000343524 LRRC4CQ9HCJ2 640 aa8.66□□□□□ -1.02
ATG4A-201ENST00000343524 TYW1Q9NV66 732 aaKnown RBP8.66□□□□□ -1.02
ATG4A-201ENST00000343524 NDE1Q9NXR1 346 aa8.66□□□□□ -1.02
ATG4A-201ENST00000343524 GRHL1Q9NZI5 618 aa8.66□□□□□ -1.02
ATG4A-201ENST00000343524 SENP1Q9P0U3 644 aa8.66□□□□□ -1.02
ATG4A-201ENST00000343524 PHTF1Q9UMS5 762 aa8.66□□□□□ -1.02
ATG4A-201ENST00000343524 FRMPD4Q14CM0 1322 aa8.66□□□□□ -1.02
ATG4A-201ENST00000343524 ZNF532Q9HCE3 1301 aa8.66□□□□□ -1.02
ATG4A-201ENST00000343524 SCN11AQ9UI33 1791 aa8.66□□□□□ -1.02
ATG4A-201ENST00000343524 ARFGEF1Q9Y6D6 1849 aa8.66□□□□□ -1.02
ATG4A-201ENST00000343524 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.66□□□□□ -1.02
ATG4A-201ENST00000343524 ARHGAP10A1A4S6 786 aa8.66□□□□□ -1.02
ATG4A-201ENST00000343524 FAM47DPA6NHR8 397 aa8.66□□□□□ -1.02
ATG4A-201ENST00000343524 CIB2O75838 187 aa8.66□□□□□ -1.02
ATG4A-201ENST00000343524 HARSP12081 509 aaKnown RBP8.66□□□□□ -1.02
ATG4A-201ENST00000343524 SCG2P13521 617 aa8.66□□□□□ -1.02
ATG4A-201ENST00000343524 KRT13P13646 458 aa8.66□□□□□ -1.02
ATG4A-201ENST00000343524 PDE6AP16499 860 aa8.66□□□□□ -1.02
ATG4A-201ENST00000343524 MUTP22033 750 aa8.66□□□□□ -1.02
ATG4A-201ENST00000343524 FGFR4P22455 802 aa8.66□□□□□ -1.02
ATG4A-201ENST00000343524 MTTPP55157 894 aa8.66□□□□□ -1.02
ATG4A-201ENST00000343524 MARSP56192 900 aaKnown RBP8.66□□□□□ -1.02
ATG4A-201ENST00000343524 FKBP3Q00688 224 aaKnown RBP8.66□□□□□ -1.02
ATG4A-201ENST00000343524 PLCB3Q01970 1234 aa8.66□□□□□ -1.02
ATG4A-201ENST00000343524 MAP3K10Q02779 954 aa8.66□□□□□ -1.02
ATG4A-201ENST00000343524 BTG3Q14201 252 aaPredicted RBP8.66□□□□□ -1.02
ATG4A-201ENST00000343524 GRM2Q14416 872 aa8.66□□□□□ -1.02
ATG4A-201ENST00000343524 RRP1BQ14684 758 aaKnown RBP8.66□□□□□ -1.02
ATG4A-201ENST00000343524 NPY5RQ15761 445 aa8.66□□□□□ -1.02
ATG4A-201ENST00000343524 PROX2Q3B8N5 592 aa8.66□□□□□ -1.02
ATG4A-201ENST00000343524 WDR72Q3MJ13 1102 aa8.66□□□□□ -1.02
ATG4A-201ENST00000343524 LRRC24Q50LG9 513 aa8.66□□□□□ -1.02
ATG4A-201ENST00000343524 OLFML2BQ68BL8 750 aa8.66□□□□□ -1.02
ATG4A-201ENST00000343524 GRAMD4Q6IC98 578 aa8.66□□□□□ -1.02
ATG4A-201ENST00000343524 ALKBH5Q6P6C2 394 aaKnown RBP8.66□□□□□ -1.02
ATG4A-201ENST00000343524 CCDC62Q6P9F0 684 aa8.66□□□□□ -1.02
ATG4A-201ENST00000343524 ZNF790Q6PG37 636 aa8.66□□□□□ -1.02
ATG4A-201ENST00000343524 LRRC55Q6ZSA7 311 aa8.66□□□□□ -1.02
ATG4A-201ENST00000343524 VPS52Q8N1B4 723 aa8.66□□□□□ -1.02
ATG4A-201ENST00000343524 C4orf32Q8N8J7 132 aa8.66□□□□□ -1.02
ATG4A-201ENST00000343524 SPATA5Q8NB90 893 aa8.66□□□□□ -1.02
ATG4A-201ENST00000343524 ART4Q93070 314 aa8.66□□□□□ -1.02
ATG4A-201ENST00000343524 CALML4Q96GE6 196 aa8.66□□□□□ -1.02
ATG4A-201ENST00000343524 ZFRQ96KR1 1074 aaKnown RBP8.66□□□□□ -1.02
ATG4A-201ENST00000343524 PACSIN1Q9BY11 444 aa8.66□□□□□ -1.02
ATG4A-201ENST00000343524 SEMA4AQ9H3S1 761 aa8.66□□□□□ -1.02
ATG4A-201ENST00000343524 ETNK2Q9NVF9 386 aa8.66□□□□□ -1.02
ATG4A-201ENST00000343524 ZDHHC7Q9NXF8 308 aa8.66□□□□□ -1.02
ATG4A-201ENST00000343524 NAGPAQ9UK23 515 aa8.66□□□□□ -1.02
ATG4A-201ENST00000343524 PPP1R9AQ9ULJ8 1098 aa8.66□□□□□ -1.02
ATG4A-201ENST00000343524 SMG5Q9UPR3 1016 aaKnown RBP8.66□□□□□ -1.02
ATG4A-201ENST00000343524 TMEM98Q9Y2Y6 226 aa8.66□□□□□ -1.02
ATG4A-201ENST00000343524 SNX24Q9Y343 169 aa8.66□□□□□ -1.02
ATG4A-201ENST00000343524 ARAP2Q8WZ64 1704 aa8.66□□□□□ -1.02
ATG4A-201ENST00000343524 PFASO15067 1338 aa8.66□□□□□ -1.02
ATG4A-201ENST00000343524 TNKSO95271 1327 aa8.66□□□□□ -1.02
ATG4A-201ENST00000343524 CCDC194A0A1B0GVG4 234 aa8.65□□□□□ -1.02
ATG4A-201ENST00000343524 PRAMEF22A3QJZ6 481 aa8.65□□□□□ -1.02
ATG4A-201ENST00000343524 GLTPD2A6NH11 291 aa8.65□□□□□ -1.02
ATG4A-201ENST00000343524 GYG2O15488 501 aa8.65□□□□□ -1.02
ATG4A-201ENST00000343524 TPD52L2O43399 206 aaKnown RBP8.65□□□□□ -1.02
ATG4A-201ENST00000343524 OPHN1O60890 802 aa8.65□□□□□ -1.02
ATG4A-201ENST00000343524 FKBP6O75344 327 aa8.65□□□□□ -1.02
ATG4A-201ENST00000343524 IDH1O75874 414 aaKnown RBP8.65□□□□□ -1.02
ATG4A-201ENST00000343524 KRT36O76013 467 aa8.65□□□□□ -1.02
ATG4A-201ENST00000343524 PCCAP05165 728 aaPredicted RBP8.65□□□□□ -1.02
ATG4A-201ENST00000343524 SNRPA1P09661 255 aaKnown RBP8.65□□□□□ -1.02
ATG4A-201ENST00000343524 PLCG1P19174 1290 aa8.65□□□□□ -1.02
ATG4A-201ENST00000343524 FUT2Q10981 343 aa8.65□□□□□ -1.02
ATG4A-201ENST00000343524 ASPHQ12797 758 aa8.65□□□□□ -1.02
ATG4A-201ENST00000343524 MED21Q13503 144 aa8.65□□□□□ -1.02
ATG4A-201ENST00000343524 HNRNPDQ14103 355 aaKnown RBP8.65□□□□□ -1.02
ATG4A-201ENST00000343524 P3H1Q32P28 736 aa8.65□□□□□ -1.02
ATG4A-201ENST00000343524 TRMT5Q32P41 509 aaKnown RBP8.65□□□□□ -1.02
ATG4A-201ENST00000343524 PDCD4Q53EL6 469 aaKnown RBP8.65□□□□□ -1.02
ATG4A-201ENST00000343524 IZUMO2Q6UXV1 221 aa8.65□□□□□ -1.02
ATG4A-201ENST00000343524 ADGRG6Q86SQ4 1221 aa8.65□□□□□ -1.02
ATG4A-201ENST00000343524 NUP93Q8N1F7 819 aa8.65□□□□□ -1.02
ATG4A-201ENST00000343524 UBL4BQ8N7F7 174 aa8.65□□□□□ -1.02
ATG4A-201ENST00000343524 FAM133AQ8N9E0 248 aa8.65□□□□□ -1.02
ATG4A-201ENST00000343524 KIAA0895Q8NCT3 520 aa8.65□□□□□ -1.02
ATG4A-201ENST00000343524 C7orf43Q8WVR3 580 aa8.65□□□□□ -1.02
ATG4A-201ENST00000343524 NRG4Q8WWG1 115 aa8.65□□□□□ -1.02
ATG4A-201ENST00000343524 RFFLQ8WZ73 363 aa8.65□□□□□ -1.02
ATG4A-201ENST00000343524 ABTB1Q969K4 478 aaPredicted RBP8.65□□□□□ -1.02
ATG4A-201ENST00000343524 TTC25Q96NG3 672 aa8.65□□□□□ -1.02
ATG4A-201ENST00000343524 GPAMQ9HCL2 828 aa8.65□□□□□ -1.02
ATG4A-201ENST00000343524 FAIMQ9NVQ4 179 aa8.65□□□□□ -1.02
ATG4A-201ENST00000343524 PLK2Q9NYY3 685 aa8.65□□□□□ -1.02
ATG4A-201ENST00000343524 RABGEF1Q9UJ41 708 aa8.65□□□□□ -1.02
ATG4A-201ENST00000343524 DBR1Q9UK59 544 aaKnown RBP8.65□□□□□ -1.02
ATG4A-201ENST00000343524 MTUS1Q9ULD2 1270 aa8.65□□□□□ -1.02
ATG4A-201ENST00000343524 CNTNAP5Q8WYK1 1306 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms