RNA–Protein interactions for RNA: ENST00000343348.10

SEMA6A-202, Transcript of semaphorin 6A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA6A, Length 6,878 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6A-202ENST00000343348 PWP1Q13610 501 aa12.81□□□□□ -0.36
SEMA6A-202ENST00000343348 STAMBPL1Q96FJ0 436 aa12.81□□□□□ -0.36
SEMA6A-202ENST00000343348 AGPAT1Q99943 283 aa12.81□□□□□ -0.36
SEMA6A-202ENST00000343348 PRDX5P30044 214 aa12.81□□□□□ -0.36
SEMA6A-202ENST00000343348 IL6STP40189 918 aaPredicted RBP12.81□□□□□ -0.36
SEMA6A-202ENST00000343348 RGS7P49802 495 aa12.81□□□□□ -0.36
SEMA6A-202ENST00000343348 CCDC81Q6ZN84 652 aa12.81□□□□□ -0.36
SEMA6A-202ENST00000343348 ADGRF4Q8IZF3 695 aa12.81□□□□□ -0.36
SEMA6A-202ENST00000343348 ZNF579Q8NAF0 562 aaKnown RBP12.81□□□□□ -0.36
SEMA6A-202ENST00000343348 YIPF2Q9BWQ6 316 aa12.81□□□□□ -0.36
SEMA6A-202ENST00000343348 BFARQ9NZS9 450 aa12.81□□□□□ -0.36
SEMA6A-202ENST00000343348 LINC00854A0A1B0GVQ3 168 aa12.81□□□□□ -0.36
SEMA6A-202ENST00000343348 SERPINB3P29508 390 aa12.81□□□□□ -0.36
SEMA6A-202ENST00000343348 S100A5P33763 92 aa12.81□□□□□ -0.36
SEMA6A-202ENST00000343348 BAG6P46379 1132 aa12.81□□□□□ -0.36
SEMA6A-202ENST00000343348 PCSK7Q16549 785 aa12.81□□□□□ -0.36
SEMA6A-202ENST00000343348 CEP78Q5JTW2 689 aa12.81□□□□□ -0.36
SEMA6A-202ENST00000343348 GRAMD1AQ96CP6 724 aa12.81□□□□□ -0.36
SEMA6A-202ENST00000343348 EIF2AK1Q9BQI3 630 aaKnown RBP12.81□□□□□ -0.36
SEMA6A-202ENST00000343348 LXNQ9BS40 222 aa12.81□□□□□ -0.36
SEMA6A-202ENST00000343348 TFR2Q9UP52 801 aa12.81□□□□□ -0.36
SEMA6A-202ENST00000343348 TCOF1Q13428 1488 aaKnown RBP12.81□□□□□ -0.36
SEMA6A-202ENST00000343348 MAGI2Q86UL8 1455 aa12.81□□□□□ -0.36
SEMA6A-202ENST00000343348 PPP1R37O75864 691 aa12.81□□□□□ -0.36
SEMA6A-202ENST00000343348 HSPA1AP0DMV8 641 aaKnown RBP12.81□□□□□ -0.36
SEMA6A-202ENST00000343348 HSPA1BP0DMV9 641 aaKnown RBP12.81□□□□□ -0.36
SEMA6A-202ENST00000343348 PPP3CCP48454 512 aa12.81□□□□□ -0.36
SEMA6A-202ENST00000343348 HLFQ16534 295 aa12.81□□□□□ -0.36
SEMA6A-202ENST00000343348 RC3H1Q5TC82 1133 aaKnown RBP12.81□□□□□ -0.36
SEMA6A-202ENST00000343348 CXorf56Q9H5V9 222 aa12.81□□□□□ -0.36
SEMA6A-202ENST00000343348 CD248Q9HCU0 757 aa12.81□□□□□ -0.36
SEMA6A-202ENST00000343348 ZBTB39O15060 712 aa12.81□□□□□ -0.36
SEMA6A-202ENST00000343348 DEAF1O75398 565 aaPredicted RBP12.81□□□□□ -0.36
SEMA6A-202ENST00000343348 SERPINB4P48594 390 aa12.81□□□□□ -0.36
SEMA6A-202ENST00000343348 KLK7P49862 253 aa12.81□□□□□ -0.36
SEMA6A-202ENST00000343348 CDKL3Q8IVW4 592 aaPredicted RBP12.81□□□□□ -0.36
SEMA6A-202ENST00000343348 ERP27Q96DN0 273 aa12.81□□□□□ -0.36
SEMA6A-202ENST00000343348 USE1Q9NZ43 259 aa12.81□□□□□ -0.36
SEMA6A-202ENST00000343348 NMT1P30419 496 aaKnown RBP12.81□□□□□ -0.36
SEMA6A-202ENST00000343348 PHKA2P46019 1235 aa12.81□□□□□ -0.36
SEMA6A-202ENST00000343348 SULT1E1P49888 294 aa12.81□□□□□ -0.36
SEMA6A-202ENST00000343348 DHX34Q14147 1143 aaKnown RBP12.81□□□□□ -0.36
SEMA6A-202ENST00000343348 SGO1Q5FBB7 561 aa12.81□□□□□ -0.36
SEMA6A-202ENST00000343348 TRMT2AQ8IZ69 625 aaKnown RBP12.81□□□□□ -0.36
SEMA6A-202ENST00000343348 KIF12Q96FN5 646 aa12.81□□□□□ -0.36
SEMA6A-202ENST00000343348 SLC7A5P2Q9GIP4 190 aa12.81□□□□□ -0.36
SEMA6A-202ENST00000343348 KDM4CQ9H3R0 1056 aa12.81□□□□□ -0.36
SEMA6A-202ENST00000343348 RNPEPQ9H4A4 650 aa12.81□□□□□ -0.36
SEMA6A-202ENST00000343348 ZSCAN32Q9NX65 697 aa12.81□□□□□ -0.36
SEMA6A-202ENST00000343348 USP15Q9Y4E8 981 aaPredicted RBP12.81□□□□□ -0.36
SEMA6A-202ENST00000343348 IMPDH2P12268 514 aa12.8□□□□□ -0.36
SEMA6A-202ENST00000343348 TBXAS1P24557 533 aaPredicted RBP12.8□□□□□ -0.36
SEMA6A-202ENST00000343348 GUCY1A2P33402 732 aa12.8□□□□□ -0.36
SEMA6A-202ENST00000343348 PDAP1Q13442 181 aaKnown RBP12.8□□□□□ -0.36
SEMA6A-202ENST00000343348 PRPF39Q86UA1 669 aaKnown RBP12.8□□□□□ -0.36
SEMA6A-202ENST00000343348 C17orf80Q9BSJ5 609 aa12.8□□□□□ -0.36
SEMA6A-202ENST00000343348 MRPL1Q9BYD6 325 aaKnown RBP12.8□□□□□ -0.36
SEMA6A-202ENST00000343348 SHCBP1LQ9BZQ2 653 aa12.8□□□□□ -0.36
SEMA6A-202ENST00000343348 TDRD3Q9H7E2 651 aaKnown RBP12.8□□□□□ -0.36
SEMA6A-202ENST00000343348 EXOSC4Q9NPD3 245 aaKnown RBP12.8□□□□□ -0.36
SEMA6A-202ENST00000343348 SENP1Q9P0U3 644 aa12.8□□□□□ -0.36
SEMA6A-202ENST00000343348 ATF5Q9Y2D1 282 aaPredicted RBP12.8□□□□□ -0.36
SEMA6A-202ENST00000343348 ADGRL2O95490 1459 aa12.8□□□□□ -0.36
SEMA6A-202ENST00000343348 CAND2O75155 1236 aa12.8□□□□□ -0.36
SEMA6A-202ENST00000343348 RFFLQ8WZ73 363 aa12.8□□□□□ -0.36
SEMA6A-202ENST00000343348 AGPAT5Q9NUQ2 364 aa12.8□□□□□ -0.36
SEMA6A-202ENST00000343348 ABT1Q9ULW3 272 aaKnown RBP12.8□□□□□ -0.36
SEMA6A-202ENST00000343348 EIF3HO15372 352 aaKnown RBP eCLIP12.8□□□□□ -0.36
SEMA6A-202ENST00000343348 FKBP9O95302 570 aa12.8□□□□□ -0.36
SEMA6A-202ENST00000343348 TNFAIP2Q03169 654 aa12.8□□□□□ -0.36
SEMA6A-202ENST00000343348 STX3Q13277 289 aa12.8□□□□□ -0.36
SEMA6A-202ENST00000343348 MAPRE2Q15555 327 aa12.8□□□□□ -0.36
SEMA6A-202ENST00000343348 SNRNP48Q6IEG0 339 aaKnown RBP12.8□□□□□ -0.36
SEMA6A-202ENST00000343348 FKBP9P1Q75LS8 142 aa12.8□□□□□ -0.36
SEMA6A-202ENST00000343348 STX19Q8N4C7 294 aa12.8□□□□□ -0.36
SEMA6A-202ENST00000343348 FAM162AQ96A26 154 aa12.8□□□□□ -0.36
SEMA6A-202ENST00000343348 PHF21AQ96BD5 680 aa12.8□□□□□ -0.36
SEMA6A-202ENST00000343348 RERGLQ9H628 205 aa12.8□□□□□ -0.36
SEMA6A-202ENST00000343348 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.8□□□□□ -0.36
SEMA6A-202ENST00000343348 CAB39Q9Y376 341 aaPredicted RBP12.8□□□□□ -0.36
SEMA6A-202ENST00000343348 H0YC42 278 aa12.8□□□□□ -0.36
SEMA6A-202ENST00000343348 GRAP2O75791 330 aa12.8□□□□□ -0.36
SEMA6A-202ENST00000343348 HMBSP08397 361 aa12.8□□□□□ -0.36
SEMA6A-202ENST00000343348 MAP3K10Q02779 954 aa12.8□□□□□ -0.36
SEMA6A-202ENST00000343348 CELF4Q9BZC1 486 aaKnown RBP12.8□□□□□ -0.36
SEMA6A-202ENST00000343348 TASP1Q9H6P5 420 aa12.8□□□□□ -0.36
SEMA6A-202ENST00000343348 RAB6BQ9NRW1 208 aa12.8□□□□□ -0.36
SEMA6A-202ENST00000343348 CHORDC1Q9UHD1 332 aaPredicted RBP12.8□□□□□ -0.36
SEMA6A-202ENST00000343348 SNX12Q9UMY4 172 aa12.8□□□□□ -0.36
SEMA6A-202ENST00000343348 INSRP06213 1382 aa12.8□□□□□ -0.36
SEMA6A-202ENST00000343348 ACTR2P61160 394 aa12.8□□□□□ -0.36
SEMA6A-202ENST00000343348 TRIP10Q15642 601 aa12.8□□□□□ -0.36
SEMA6A-202ENST00000343348 PKN3Q6P5Z2 889 aa12.8□□□□□ -0.36
SEMA6A-202ENST00000343348 SLC30A9Q6PML9 568 aa12.8□□□□□ -0.36
SEMA6A-202ENST00000343348 DCAF4Q8WV16 495 aa12.8□□□□□ -0.36
SEMA6A-202ENST00000343348 VPS50Q96JG6 964 aa12.8□□□□□ -0.36
SEMA6A-202ENST00000343348 TMEM117Q9H0C3 514 aa12.8□□□□□ -0.36
SEMA6A-202ENST00000343348 TRIM45Q9H8W5 580 aaPredicted RBP12.8□□□□□ -0.36
SEMA6A-202ENST00000343348 DLGAP2Q9P1A6 1054 aa12.8□□□□□ -0.36
SEMA6A-202ENST00000343348 ABCC2Q92887 1545 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms